Brachyistius frenatus (kelp perch): 138615394
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Entry
138615394 CDS
T10614
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138615394 (clstn1)
Cell adhesion molecules [BR:
bfre04515
]
Cadherins
Cadherin related
138615394 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Toxin_R_bind_N
FAM176
V_ATPase_I
EphA2_TM
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
138615394
NCBI-ProteinID:
XP_069545091
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MRFRGSKQFASAVGLVLGLLCAVDAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTIDKDGFIKNTEKLSYGKEHMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRASI
DLETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKIPDGRVKTSLKEPFTISVWMRHGPGAHEKETILCNSDKTDMNRHHYSLYVH
NCRLIFLLRQDPSEAENYKPAEFHWKLDQVCDKEWHHYVLNIEFPTVSLFVDGTTFEPFL
VTEDYPLRTSKIETQLTIGACWQENSGHDNDTETVSEPPSGANARMVQFFRGNLAGLIIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVAAAVKVEFNPNQSSLIVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVTVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEADTESEATEGADDDPTVQETVVSEEIMHNLDT
CEVTVVGDELDGEHESLEVDMSQLQQRALEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTSSPVEHSNNAMMQPNFINPIHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRSMTDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggagtaagcaatttgcatccgccgtcggactggtcctcggactatta
tgtgcggtggacgcagctaaagtcaacaagcacaaaccatggatcgagacgacgtaccac
ggcatcgtaacggaaaatgacgacaaagttcttctggacccgcctctaattgcgctggac
aaggatgctcctctacgctatgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcaggatccatgggcagaatgtacccttcgaggcagtggtcctggacaag
tccactggcgaaggggtgattagggccaaggacaagctggactgcgagctgcagaaggag
cacaccttcaccatccaggcctatgactgtggagagggtcctgatggcgccaacatgaag
aaatcccacaaggccaccgtccacatccaagtgaacgacatcaacgagtattcgccggtg
ttcaaagagaagtcgtacaaagccaccgttattgagggaaagaagtatgacagcatcctg
aaggtggaagctgtggacgccgactgctcgttccagttcagccaaatctgcaactacgag
atcgtgactcccgatgtgccgttcaccatcgacaaagatggttttatcaagaacacagag
aaactgagctacggcaaagagcacatgtataagttgactgtgaccgcctacgactgtgga
aagaaccgggcctccgaggacgtgctggtcaagattagcgtcaagcccacctgcaaaccc
agctggcaaggcttcaataagaggattgaatacgagcctggcactggtagccttgccctt
ttccccagcatgcacttggagacctgtgatgagccaatcacctccatccgagccagtatt
gatctggaaaccaaccacattggaaagggctgtgaccgtgatacctattctgagaagtct
ctacacaagctatgtggagccagctctggcaccgtggagctccttcctgcacccagcagc
tccgccaactggacggtaggactgcctaccgataacgggcacgacagcgaccaggtgttt
gagtttaatggcacccaggccatcaagattcctgatggtagggtgaaaaccagcctgaag
gagcccttcaccatctctgtgtggatgaggcacggccccggggcccacgagaaggagacc
atcctctgcaactctgacaagacagacatgaacagacaccactactcactctacgtgcac
aactgcagactgatcttcctcctccgccaggacccgtcggaggcagagaactacaaacca
gcagagtttcactggaaactcgaccaggtgtgtgacaaagagtggcatcactatgtgctg
aacatagagttccccactgtttctttgtttgtggatgggaccacctttgagcccttcctg
gttacagaggactacccactgcgcacctccaagatcgaaactcagcttaccatcggtgcc
tgctggcaagaaaactcaggacatgacaatgacactgagacagtctctgagcccccctca
ggcgcaaacgctcgcatggttcagtttttccgggggaaccttgcggggctgatcatccgc
tctggcaagctggagaacaagaaggtgatcgactgtttgtacacctgcaaggaaggactc
gatgtgcagctgcctgaggaggtggctgcagctgtcaaggtggagttcaaccccaaccag
tcctctctgatcgtggaaggcgacgacatcgatgccttcgacaaggtcatgcagcacatc
tcctacttgaactcccgccagttcccgacccctgggatcaggcaccttcgtatctccacc
accgtcaagtgcttcaacgaggagtcctgtgtgacggtgccggatgctgaaggttacgtg
atggtgctgcagcctgaagagccaaagatcagcctgagcggcatcgaccacttcgcccgc
agtgccgccgaatttgagagtcaggaaggagtgacgctgttccctgagcttcgcattgtg
agcaccatcacccgtgaagtggaggccgacacggagtccgaagccacagagggagctgac
gatgaccccacagtccaagagacggtggtgtcagaggaaatcatgcacaacctggacaca
tgtgaagtgaccgtggtgggagacgagctggacggggagcatgagagtctggaggtggac
atgtcccagctgcagcagcgtgccttagagatgagctcatctaaccttggcctcgtcatc
actggtgtgaacaccatggcgaactatgagcaggtcctgcacctcatccgctacaagaac
tggcacactgaggctctctttgacaggaaattcaaactggtctgctctgagctcaacggt
cgctacatcagcaacgacttcaaggtcgaggtaaatgtcatccacacttccagtccggtg
gagcactctaacaacgccatgatgcaacccaacttcatcaacccgattcatcacgcctcg
gtcgatctgtctggtcacaacctggtcaacgctcaccaggcctcagtggtccccagcgcc
gccaccatcgtcatcgtggtgtgcgtcagcttcctggtgttcatgatcatcctgggggtg
ttccgcatccgagcggcgcaccagcgcagcatgacggaccaggagaacggcaaggagaac
gagatggactgggacgactcggccctcaccatcaccgtaaaccccatggagacgtacgag
gaccagcacagcagcgaggaggaggaggaagaggaggaggagagcgaagacggagaggag
gaagatgacatcacgagcgctgagtcagagagcagcgaagacgaggagggcggggagccg
gaggaccagcagggggccagcagacagcagcagctggagtgggacgactccaccctcacc
tactaa
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