Brachyistius frenatus (kelp perch): 138615816
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Entry
138615816 CDS
T10614
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03440
Homologous recombination
bfre03460
Fanconi anemia pathway
Brite
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
138615816 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
138615816 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138615816
NCBI-ProteinID:
XP_069545755
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Position
Unknown
AA seq
1429 aa
AA seq
DB search
METNGGDAVHREEQLKTTLHCDDKEKLRRKLAQLQREYLRTAQRLQRAERLDAVQRHVRS
TVTQQDQQDQRHVRSTVTQQDQRHVRSTVTQQDQQDQRHVRSTVTQQDQRHPELTSNPCL
IQSIAVDVPQCQGHSEGPADCDNSRRRQVIRFLLPADAASPQTPGPSDGTPAGHRPSPAL
RLRSRRSRLRWERRSAEVGMNTDNSEEAPEQSELTGSTRTAGEEKKAKSKGTDVLNESEE
LFSGTDSESPSLLLTHWNTDTREKDGKEMQGHQEDKTELRAEGEKESESTSILLTSCNPA
ITTEERGQDGTQSERREEVMRGEDGDNNRGQSEISLCEKTSDKHTGENASEKIESEKNPD
ETVGMKEEKTAVSLLDSCTLVEGLLFPAEYYVRTTRRMTLSRSQPDMQAVILSQLSMGRP
RRSRGRGPSRSTHSDQRTHPDFSSATTAPTAVIPLKLSHVQAVDAEQGQSARGMSDPSAA
RQIESDAGFSTVVTAARPAGGRRGKRGRGRGRPRTPRPSLSLDTHQLGSGQTSDDPQPTN
TPISSSESPHGTDGPGPRLTPGETISVPDEPQPAFTRSTSSLPSSGVDGALPSSACKYLE
KVCPVFLSGSSHRNRSSSSWRSLLLPSSPASQTSPLPSLLPGSLVNGLTNLDIHQDFHLP
DDQFASLKLHKLRQVATGSEVEHFSSPSYNTRSSNRRYDPHHNINNNNSSSEPVMPLSLP
LSLTPTIADSPHPNEEQQAATQSVDLQDLSTEDKLTDEMIGRSLTEEPSDREAHKESRTE
NLHMETRSSSTESVSVVEECEDKSAGHEVGTPNCHSQSNTHTNINSTNKPHLDFTDRPAG
KVNDYITGHSDDLIINQPASEKQMSIDPEAEDQAPIEALYIDCPLQETPEEPWNNCTALN
ARNDMKAQGESPVQQLDVKTCREDSEEPSEPSEPRTRLTTDRLSENNSKCFQLLLTSQAS
ALDPFITPHLPSSAVTSSPPLPSLGSSPHPVTGSRPQITSPRAPSLTLPPPPHSPSTQAL
SPPALSPCPSVTYPPPSPTDVAPSARIRTSSEPPGDQCHRVEPAATCPTPASIQLQGSGG
QRTEETAEKYKMRHTHTLKAAAGGCLVDACCVPGSAGGLCVAAAGTWAVCLWSQTSASDW
SLIHTWTFDEPVINVFPVPDAAALMCVTLGQLEIREVRTLSCSSFTGTLLCQGLVQAAVG
VSKSRVVTSSPSATGSTLQVFTLTDGSSSPGSQPLVSPGVCVGALAAVDGLSDALIGTDE
GGRLFIWNLKTGQLLRRVLLGGAFSHTACLRGYASCGVLFVLLQHQFLSSPEEEEKEGKL
KDGLFPEEDTKTALFSLVTVNPLSGRSVPATRLYPPEAWSGRLCEADARRCSVVGLSQSG
CVCVWELGPGGASRMVRAPESEGWQLARWGGADTLVTGHHNGDVTLHCC
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggagactaacgggggagacgcggtgcaccgtgaggagcagctgaagaccacgctgcac
tgcgacgacaaggagaagcttcgcaggaagttggcacagctgcaaagggaatacctgagg
acagcccagagactgcagcgtgcggagcgcttggatgccgtgcagagacatgtgaggagc
accgtcactcagcaggaccagcaggaccagagacatgtgaggagcaccgtcactcagcag
gaccagagacatgtgaggagcaccgtcactcagcaggaccagcaggaccagagacatgtg
aggagcaccgtcactcagcaggaccagagacatccagagctcacatctaatccctgcctc
atccaatcaatagctgtagatgtcccgcagtgccagggacactctgaaggtccagcagac
tgtgataactccaggaggagacaggtgatcaggttcctgctccccgctgatgctgccagt
ccacagacaccaggtccaagcgatggcacacctgcaggccacagacccagtcctgccctg
cgcctcaggtcacgacgcagccgcctgcgctgggagaggaggagcgcggaggtcggcatg
aacacggacaacagcgaagaagcaccggagcagagtgaactgacgggaagtactagaaca
gcaggagaggagaaaaaagccaagtcaaagggaacagatgttttgaatgaaagtgaagag
ctgttttcaggtacagactccgagtctccctctctgctgcttacacactggaacactgac
acaagagagaaggacggaaaggagatgcaaggacaccaagaagacaaaactgagttgaga
gctgaaggggaaaaagaatcagagtcgacctccatcttgctcacatcttgtaaccccgcg
ataaccacagaagaaaggggacaagatggcactcaaagtgaaagaagagaggaggtgatg
agaggagaagatggtgataataacagaggacagagtgaaataagcctatgtgaaaagact
agtgataaacacactggagaaaatgcatcagaaaaaatagaaagtgaaaaaaatcctgat
gaaactgtgggcatgaaagaggaaaagacagctgtgagcctcctggactcttgtacctta
gtggaaggactactgttcccagcggagtactacgttcgaaccacaaggcgaatgacattg
tcacgcagccagcctgacatgcaggctgtcatactctcccagctcagcatggggcgacct
cgcaggagccgcggcagaggaccgagcaggagcacacattcagatcaacgcactcaccca
gatttctcctctgcgacgactgcacccacggctgtaattcctcttaaactgtcacatgtg
caggctgttgacgcagagcagggtcagagcgccagggggatgtcggacccgtctgcagct
cggcagattgaatcagatgccggcttttcaactgtggtcaccgcggctcgtccagcggga
ggccggagggggaagagaggaaggggcagagggagacctcggaccccacgaccctctctt
agtttagatacccatcagttaggcagcggacaaacctcagacgatccgcaacccaccaac
accccaatctcgtcctccgagtctccccatggaactgatggaccaggtccccgcctcact
ccaggggaaactatttcagtgccagatgaaccccagcctgcgttcacccgcagcacttcg
tcgctgccttcttctggagttgatggagctctacccagctctgcctgcaaatatctggag
aaggtctgccccgtgtttctgagcggatcctcacacaggaacagaagctcatcaagctgg
cgatctctcctcttgccctcctctccagcgtcccaaacatctccgcttccctctctgttg
cccggctcgctggtcaacggcctgacgaacctggacatccaccaagatttccatctccca
gacgaccagtttgcctccctgaagctgcacaagctccgccaagtcgccaccggatcagaa
gtcgaacatttctcatcgccgtcttacaacacgcgcagcagtaaccggcgttatgaccct
caccacaacatcaacaacaacaacagcagcagtgaaccggtgatgcctctttctctccct
ctcagcctcacgcccacaatcgcagactcacctcatcccaatgaagagcaacaagctgcc
acacagtctgtagaccttcaggacttgtcgactgaagacaagctaacagatgaaatgatt
ggccggtcgttaactgaagagccgtcggatcgagaagcccataaagagtctcggactgaa
aacctccacatggagactcggagcagctcgacagaatcggtgtcagtggtcgaagagtgt
gaagataaatctgcagggcatgaagttgggactccaaactgtcatagccaaagcaacacg
cacacaaatataaactccactaacaaacctcatctagactttacagacagaccagcaggc
aaagtgaatgattatatcactggacactcagatgacctcataataaaccagcctgcatca
gaaaaacaaatgtctatagaccctgaagcagaagaccaagctcccatcgaggctctttac
attgattgccctctacaggaaacaccagaagagccttggaacaactgcaccgctttaaat
gcacgtaatgacatgaaagctcaaggagagtctcctgtgcagcagctggatgtgaaaacg
tgtcgcgaggattcagaggaaccttctgaaccctctgaacccagaacaagacttaccaca
gacagactgagcgaaaataacagcaaatgtttccagctgctgttgacttctcaagcctca
gcgctcgacccgttcattaccccgcacctgccctcatccgctgtaacctccagtcccccg
ctaccctccctcggatccagcccccacccggtcaccggcagccgcccccagatcacctcc
ccccgcgccccttccctcaccctgcctcctcctcctcacagcccgtccacacaggctctg
tctcctccagctctgtctccgtgtccgtccgtcacttacccccctccgagcccgactgat
gtcgccccctccgctcggatccggacttcatctgagccaccaggtgatcagtgtcacagg
gttgaacctgctgctacctgcccgactcctgccagcattcagctccagggctcaggtgga
cagaggacagaggagactgcagagaagtacaagatgagacacacgcacacactgaaggcc
gcagcaggaggctgtttggtggacgcatgctgtgttcccggatccgcaggcggtttgtgt
gtagcagcagcaggaacgtgggctgtgtgcctctggagtcagacgtcagcatctgattgg
agcttaatacacacctggacctttgatgagccagtgatcaatgtgtttcctgtcccggat
gctgctgcgctcatgtgtgtgactctgggtcagttggaaatcagagaagtgagaacgctg
tcgtgctccagcttcacgggaacgctcctctgtcaggggctcgtccaggcagccgtgggc
gtgtccaagtccagagtggtcacctcgtccccctcggcgaccggttccaccctgcaggtg
ttcacgctgacggacggcagcagctcgcccggctcgcagcctctggtgtctcccggtgtt
tgtgtcggggctctcgctgcagtggacggactttccgacgccctcatcggcacagacgag
ggcggacggctcttcatctggaatttaaagaccggacagctgctgcgtagagtcctcctc
gggggtgctttctcacacacggcctgtctcagaggatacgcctcctgcggagtgttgttt
gtcctgctgcagcatcagttcctaagctcgccggaggaagaggaaaaagaagggaaacta
aaagacgggctgtttccagaggaggacacgaagaccgccttgttctccctggtcacggtg
aaccccctgagcggacggtccgtcccggccacccgtctgtatccacccgaggcctggtcc
ggcaggctgtgcgaagccgacgcaaggcgctgcagcgtggtgggcctgagtcagagcggc
tgcgtgtgcgtgtgggagctcgggcctggcggggcttcacggatggtccgggctccggag
agcgaaggctggcagctggctcgatgggggggggcggacacgctggtgaccgggcatcac
aacggagacgttaccctgcactgctgctaa
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integrated database retrieval system
