Brachyistius frenatus (kelp perch): 138615939
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Entry
138615939 CDS
T10614
Symbol
rims1a
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138615939 (rims1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138615939 (rims1a)
Membrane trafficking [BR:
bfre04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
138615939 (rims1a)
Small GTPases and associated proteins
Rab associated proteins
138615939 (rims1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
Zn_ribbon_Nudix
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
138615939
NCBI-ProteinID:
XP_069545920
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MFASVGPRGGPRPPVAPAIPEPDLSHLTEEERKIIMAVLARQREEEEKEEAMLKEEQPIQ
ARTVNLVGQRKPPQQNDVRGIQQQLSSYRETVIRQATAAAGSAVHRDDAPTCGICHKTKF
ADGCGNLCSYCQTKFCARCGGRVSLRSNTEDKVVIWVCNNCRKQQDILTKPGDWFGKPAG
LGSAVSEPSVCQTLGDKKLRSRSQAPPGSTTSIQDPSRPGAPGTTPGTDARSLSEPPRDT
RNGRGGGAGRRQGQPRLQTQVSMDRDLRGESRERRESRRLSKGRSLEHDPVGSGGVRRTE
EGGYHHMDHSGAPPRQAGLVPPGGRGHLVQGGEVGDGTRPGQRTAGGVGGPHEHTLSQQV
PPPELREPSSLGPGSAPGQSPVVRRTKREKAESMLRNDSLSSDQSESLRPPPPRPYKSKR
GLGAGGKRQTSVSSSEEEGGTTPEYSSCEDAEIESVSERGDWECYPHDPTVWPHPDTWQP
SKEGDHLIGRITLSKRSAAMPKEAGALLGLKVVGGRITESGRLGAFITKVKKGSLADVVG
HLRAGDEVLQWNGKLLPGATMKEVYNIILESQAEPQVELVVSRPIGVYRKYHDIPRIPDT
SHPPLESTGSSSFESQKMERPSLNVLSPSSPGMLQDAPQLLPGQLSVKLWYDKVGHQLIV
NVQQAVELPLRPDGRPRSPYVKMYFLPDRSDKSKRRTKAVKKTCEPKWNQTFVYTHVHRR
DFRNHMLELTVWDQPRSPEEDSIFMGEILIELETALLDDKPHWYPLQTHDVSSIPLPRPS
PYLPRRHAHTDAPGKKLQRSQRVTEAEFDEGTAVVSKADGRGRERQREPTSTLEVPDQQR
TPSHHIRSRSVSPHREELGRIRYRPPNVPTQRSLDDEFSHTRRSRSPTRHYDAARGRHQG
DEYLDDSEVIMIHQSMRGKSAECLHTRRSTRHNNTLPPKMPLLFNTIGKQTNSDLQPSLD
RVRSASTNCLTPDNHAPSPETERKPLSHSLPRRRPASPRILIQHASPEDDRQPRTLETPE
CQTLGRKLSNSGRGHLQGGASLSSSVTSSSARKVRQLPQLPPKSNTAEQALVAEQCVRQL
KIKVHSNRVSTTTTSSQQDLDRALKNKRELYKDQRTSSENVSHKSSDSDVSDVSAISRTS
SASRISSTSYMSIQSERPRGRFSRAVRASGRHMIKSTSVSGEIYGMDHADGSQSDTALGS
LGSGIKKRRSSLSQRVVAILPSRRSRSTSQISQTEAAGKAADRQKGKAKEAPTGKKVGKA
GSSSIQRSVETGMAVEYPRGGSGMNRQASRESTDGSMNSYSSEGNLIFSGMRLGADSQFS
DFLDGLGPGQLVGRQTLATPAIGDVQIGLMDKKGQLEVEVIRARGLTPKPGSKSLPAPYV
KVYLLDNGTCKAKKKTKIARKTLEPLYQQHLLFDESPQGKVLQVIVWGDYGRLDHKCFMG
VAQILLEDLDLSSTVIGWYKLFPPSSLVDPTLAPLTRLASQTSLDSSGPPPGVRS
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctcggtgggccctcggggcggcccgcgcccacccgtcgccccggccatcccg
gagccggacctcagccatctgacggaggaggagaggaagatcatcatggcagtgctggct
cggcagcgggaggaggaggagaaggaggaggccatgttaaaagaagagcagcctatccaa
gcgagaacggtgaacctggtcgggcagaggaaacctccgcagcaaaacgacgtccgaggc
atccagcagcagttgtccagctaccgggagacggtgatccggcaggccacggcggcggcg
ggttcggccgtccaccgggacgacgcgccgacctgcggcatctgccacaagaccaagttc
gcagacggctgtgggaacctgtgctcgtactgccagaccaagttctgcgcccgctgtggg
gggcgagtgtccctgaggtccaacacggaggacaaagtggtgatctgggtgtgtaataac
tgccggaagcagcaggatatcctgaccaagccaggagactggttcgggaagcccgccggc
ctcggttcagccgtcagcgagccgtctgtgtgccaaacgctcggggataagaagctgcga
tctcgctcccaagcacctccgggctccaccacttcaatccaagaccccagcagaccgggc
gcaccggggaccacacctggcacagatgcacggtcgctcagtgaaccaccacgagacacg
agaaatggacggggaggtggagcaggtcggcggcaaggccagcccagactgcagactcag
gtctccatggaccgcgacctccggggggagtccagggagcgaagggaaagccggcggctg
tcaaagggacgctctctggaacatgatcccgtgggaagtggcggagtaagacggacagag
gagggtggttaccaccacatggaccatagcggtgccccccctcgacaagcagggctggtc
cctcctggaggtaggggccaccttgtgcagggaggagaggtcggggacggcactcggccg
ggacagaggacggcgggcggggtaggcgggccacacgaacacactctgtcgcagcaagtt
cctccccctgaactcagagagccttccagtttggggcccggctcagcacccggccagtca
cccgtagtgagaaggaccaaacgggagaaggctgagagcatgctgcgcaatgattctctc
agctccgaccaatcggaatctctgcgtccgcccccgccgcggccctacaaatcgaaacgt
ggattgggggccggagggaagaggcaaaccagcgtcagcagttcggaggaggagggaggg
accacacctgagtacagcagctgtgaggatgctgagatcgaaagtgtcagcgagagaggc
gactgggagtgctacccacatgaccccaccgtgtggcctcatcctgatacctggcagccg
tccaaagagggagaccatctgatcggacgaatcaccctcagcaagaggagcgctgccatg
cctaaagaagcaggagctttgctggggttaaaggtggtgggaggcagaataactgagtca
gggagattaggtgccttcatcaccaaagtcaagaagggaagcctggctgacgttgtggga
catctcagagcaggagatgaagttttgcagtggaacgggaagctgttaccgggggcgacc
atgaaggaagtttacaacatcatcctggagtctcaagccgagcctcaggtggagctggtg
gtatccaggcctattggggtgtatagaaaatatcatgatatccccagaatccccgacacg
tcccaccctccattagaatctacaggttccagttcttttgagtcccagaagatggagaga
ccatccttaaatgtcctatctccctccagtcccgggatgctccaagatgctccacagtta
ttgccaggacaactctcagtgaagctgtggtatgacaaagtgggtcaccagctaatagtc
aacgtgcagcaggcggtggagcttcctcttcggcccgacgggcgtcccaggagcccctac
gtcaagatgtacttcctccctgaccgcagtgacaaaagcaaacgaaggacaaaagccgtg
aagaagacctgcgagcccaagtggaaccagacgttcgtctacactcacgtccatcgcagg
gatttccgcaaccacatgctggagctgacggtgtgggatcagcccaggtcaccagaggag
gacagcatctttatgggagagatcctgatcgagctggagacggccttactggacgacaag
cctcactggtacccgctccaaacccacgacgtctcatccatcccgctgccccgaccctcc
ccctacctgccccgacgacacgcacacacagacgcccccggcaagaaactgcagcgttct
cagcgtgtaacagaggctgaatttgatgagggtacagcagtagtatcgaaagctgatggg
cgtggcagggagaggcagagggagcccacatccaccctggaggttcccgaccagcagagg
acaccctcccatcacatacgttcccgctcggtgtccccgcaccgggaggagcttggccgc
atccggtaccggccgcccaacgttcccacccagaggagtctggatgacgagttttctcat
actcgtcgttctcgttctccaacgcgtcactacgatgctgccagaggtcgccaccagggg
gatgagtacctggatgacagtgaggtcatcatgatccaccaatcaatgcgaggcaaaagt
gctgagtgcctgcacaccaggagatctactaggcacaataacacactgccacctaagatg
ccccttttgttcaacactatcggcaaacagacaaacagtgatctccagccttctctggac
agggttaggagcgctagcaccaactgtctgactccagacaatcatgccccctcaccagag
actgaaagaaaacctttgtcccattccctgccccgaagacgtccggcaagtcccaggatt
cttatccaacatgcttcccctgaagatgacaggcaacctcggactctggaaacacctgag
tgtcagactcttggcaggaaactctctaacagtggcaggggccacctccaaggtggtgcg
tctctttcctcctcagtgacatcctcatcagcccgcaaagtgaggcagctcccacagctt
ccccccaagagcaacaccgcagaacaagccctggtggcagaacagtgtgttcgtcagctc
aagattaaggttcattccaaccgggtatccaccaccaccacctccagccaacaggacctg
gaccgagccctcaaaaataaacgagagctctataaggaccagaggacgagtagtgaaaat
gtttcccataagtcctcagacagtgatgtcagcgacgtgtcagccatctctcgaaccagc
agtgcctctcgcatcagtagcaccagctacatgtccatccagtcagagagaccccgggga
cgcttcagccgagccgtgcgtgcatcgggccgccacatgataaagagcaccagcgtgagc
ggggagatctacggcatggaccacgccgacggcagccaatcagacacggccctcgggagc
ctggggagtgggatcaagaagcgacgctcgagcctgagccagcgtgttgtcgccatcctg
ccatccagacggagtcggagtacatcgcagatcagccagacagaagcggcgggtaaggcg
gcggacaggcagaaaggtaaagcaaaagaggcgccaactgggaagaaggtgggtaaggcc
ggcagcagcagcatccagaggagcgtggagacgggcatggcggtggagtatccgcgagga
ggatcgggtatgaaccggcaggccagcagagagtcgactgacggcagcatgaacagctac
agctcggaggggaatttgatcttctcagggatgcggttgggtgccgacagtcagttcagt
gacttcctggatggtttaggccccggtcagttggtgggccggcaaactctggcaacacct
gccataggtgatgttcagatcggtttgatggataagaaaggccagctggaggtggaggtg
atcagggcacgaggccttacccctaaaccaggctccaaatccctcccagctccctacgta
aaggtgtacctgctggataatggaacatgtaaagccaaaaagaaaactaagattgcacgt
aaaaccttggagccgctctaccagcagcacctgctctttgatgagagtccgcagggcaag
gtgcttcaggtgatagtatggggcgactatggacgattggaccacaaatgttttatgggt
gtagcacagatcctattggaggacctggacctctcaagcacggtgattggctggtacaaa
ctgtttccgccatcctcattggtggaccctacattagctccgctcacgcggctggcgtct
cagacgtcactggacagctcaggaccgccgccgggcgttcggtcctag
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