KEGG   Brachyistius frenatus (kelp perch): 138616009
Entry
138616009         CDS       T10614                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    138616009 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:bfre04990]
    138616009 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:bfre04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   138616009 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ PDZ_6 LIM PDZ_2
Other DBs
NCBI-GeneID: 138616009
NCBI-ProteinID: XP_069546059
LinkDB
Position
Unknown
AA seq 322 aa
MPLRVVMQGPGPWGFRLVGGKDFEQPLAVSRVNPGGKAAQANLCIGDIILSIDGEPTENM
THLEAQNKIKGCIEEMVLSVDRSESKLWSPLSSEEGKTHPYKMNLASEPREVKLIGSTHN
RSALPFSAFGPKVVTNQYNNPSGLYSSENIKNFNSAVDEVQTLVAANDSNNKSPSDPSKS
GKRPPVAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSEKPSGFRSVKAPTTKI
GSSLGNTEKLPVCDKCGSGIVGMVVKLRDKFRHPECYTCTDCDVSLKQKGHFFVENQIYC
EKHARERVTPPEGYDVVTVFPK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgcctctgcgggtggtgatgcagggtcccggtccgtggggcttcaggctcgtcgggggg
aaagacttcgagcagccgctggccgtgtcccgggtcaacccgggcggtaaagcagcccaa
gccaacctgtgcatcggagacatcatcctgtccatcgacggagagccgacggagaacatg
actcacttggaggcgcagaacaagatcaagggctgcatcgaggaaatggtgctctccgta
gacaggtcagaatcgaaattgtggtcgccgctttcatccgaggaagggaagactcatccg
tacaagatgaatcttgcatcagagccacgggaggtgaaactcataggctccacccacaac
aggagcgcgctgcctttcagcgcttttggccccaaagttgtgaccaaccagtacaacaac
ccgtccggtttgtactcttcagagaacataaagaacttcaactccgctgtggacgaagtt
cagactctggtcgcagctaatgactccaacaacaaatctccatcagatccgtcgaaatca
ggcaagcggccgcccgtagcagcggattctgaggtctacaagatgctgcaggagaaccaa
gagtctgatgagcctcctcgacagtccgcttcattcaaggtgctgcaggagatactggag
acgggcgactcagaaaaaccatcaggcttcaggagtgtgaaagctcccaccacaaagatc
ggatcatcactggggaacacggagaagttacccgtctgtgacaaatgtggatctgggatt
gtggggatggtggtgaagctgagggacaagttccgtcaccccgagtgctacacctgcaca
gactgcgacgtcagcctgaaacagaagggacatttctttgtggagaaccagatttattgt
gagaagcacgcacgcgagcgagtcactccacccgagggctacgacgtggtcaccgtcttc
cccaagtag

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