Brachyistius frenatus (kelp perch): 138616244
Help
Entry
138616244 CDS
T10614
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfre03036
]
138616244 (chd9)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138616244 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
138616244
NCBI-ProteinID:
XP_069546505
LinkDB
All DBs
Position
Unknown
AA seq
3045 aa
AA seq
DB search
MDFFDDPNLFVGGLEGLDEDGFPSAPSLVDELNLSADFEPLQVEPLGPGKHQDMMPPVST
QQAMPSYSQPMGHYIGMKPPNPMGQTFSGSRSTGGAMIAEQHGQYHNAAVSQVPQSNGLF
CNSGSPMWGNQDQNGNMYHPISQQQPLQHQQLCHQQQQLHNQQLHVRQQQTQQRQHHPCH
QQETQQLRMRQQQLQQQQSHQQQLLNQHQQINAQAVSLQQQQQHHNFSFHPGGQSNSQQQ
IPRAQQQVQHPLTVREPPFHSRALPSKSYLESQNASLNRTCLQTPQQQGSYQLIRGGQAF
SGSGLEDSNLSFPMHSSPMVHSLPTCSVSSANAYQPAQYPAYPGEPEIPSLSQQSLSSAS
VSRPTTTTTAPLTSTVPELSGTACQFSSTPLMSQQHTRTPVSQAEECPFRALRCSGEAQE
SCKSSEMFGESMSCYPSIASHLPSEQPQSCGVINTNGYEALGDSLLPTEAQDGDLEGLEP
PDLLPDLLPQLEDAFRQQDESSCSWADSSQEKGPEDRKPTSIEYKEDKPRKNANGPGSQV
RVLSPPMKSSSSSSSSSSSSSSSSSSSSEKRVRRTHQQMESTLQDKQEKANRIISEAIAK
ARQRGEKNIPRVMSPESFPSSSSQYKAHRDREHKGNGKARSKEKACRKACIVASSKPKQK
AKIGKIVIKIGKKKKRKPESSEEESDDAPPPRHTSKNDDSKRRSNRQVKRKKYAEELEAR
LSDEEVKVIMKAKKTNAASSKTPALQLFVENPSEEDAAVVDKIMSSRVVKKEVSAGVVVE
GEEFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKTKQAQRALFFADMEEDPFNPDY
VEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKP
DSRRTERPPANLWKKRDQSREYRNGNGLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKT
IQSITFLEEIQRVGIKGPFLIIAPLSTIANWEREFHTWTHLNVIVYHGSMVSRQMLQQYE
IYFRDAQGRVIRGAYRFQAVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEG
FKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQG
ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPN
LVNTMMELRKCCNHPYLIKGAEEKILEDFREVHSPTAIDFHLQAMVQSAGKLVLIDKLLP
KMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRF
VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSY
EREMFDRASLKLGLDKAVLQSMSGRDNSLGGSTGGGAVQQQLSKKEIEDLLRRGAYGAIM
DEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDK
WAKKADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDSDDTKPKLRRNH
DRPNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRSLLAYCLVHYR
GDDKIKSFMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKVKIQSSSFDIHKAEWLRK
HNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGIQAEKVLDGVDSSEVKIWVPD
PDQSELPALWWDAISDKCLLLGVYKHGYEKYNTIRADPNLCFLERAGRPDEKAIAAEQRG
NDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAAPVTEGESAYWPSPSVL
TARLRRLITASQRYTKSRQILHIHQSQSQSQSQSQSQSQSQSQSQSQSQSQSQQTMILSA
PLCPLPATLNDTLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRA
MARLHKKTDESLQKYLCAFTAMCRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVE
LLRQVREQVLRHQFLYERLPLCQMSSDLPVWWEAGAHDRDLLIGAAKHGVSRTDYHILRD
PELSFMAAQRNYSQTKASQQQSRTSTPLLHPQLQAAGSVPTGSPPPPPTQRDADPCGLVP
KVEPASEGEEGKERRGESWSPSRAPATPTGLEEKPVSVVKENERQMVAARTKPLTPNSSE
RKPKKASKRGRREARHGSVSDSDGSSSSSSSRSSSSSSSSSASSSHSGSSSSSSSSSCSS
GSSSSSSSSSSSSDDSESEGEERKKKVPAATTVKGFDEDSVASLITTQDETQDTHVAENG
ITNNNSSQPFQGGGYMLAASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVTSF
YTTKLLDNANSLCEDPSASPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRP
LETEEGPQAQQQYLARLHELQSASDTGLADITKPQCSFQTVPSGLTGQMRLNGAVDGQPV
VKRRRGRRKNVEGMDLLFMNRSRVPAVPDQVPPGWGGIGQVGMAAAVPGFSQGSGQVPAD
TESRVPVINLKDGTRLAGDDAPRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDG
RPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGV
PPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNPLAKAAAATAAPNPAASAL
GLNPLLANGLLSGMDLTSLQAFQQNLQSLQSLQLTAGLMGLPSDAGNLAASNLAAMFPMM
LSGMAGLPNLLGMSSLLGKPAQEGAGGSDEKTKGAAAAGVGAGEPSASKAPPHTSDTKGE
RTEGSNTTPSSTSSSASSATATQSASAASAASGHPLSLNPLLLSSMLYPGMLLTPGLNLP
VSAAQPQSSNTDPALPPAAPLPPPPPPASQSSPQRTEQPQAEKDGEEEEEEEDEDQALDD
EEEEEESAEQKENSGPDGSGKAESSSSESGSSSSSSDDSDSSDED
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgatgaccccaacctctttgttggaggtttggaagggctggatgaggat
ggcttcccttcagcaccatcacttgtggatgagctaaacctcagtgctgactttgaaccc
ctccaagtggagccacttggcccagggaagcatcaagacatgatgccacccgtttctacc
caacaagccatgcccagttacagtcaacccatgggtcattacattggcatgaagccaccg
aatcctatggggcagacattttctggctctcggagcaccggtggggccatgattgctgag
caacatggccagtaccacaatgccgccgtgagtcaggtacctcaatccaacgggctgttc
tgtaacagcggcagtccaatgtggggaaaccaagaccagaatgggaatatgtaccacccc
atatctcagcagcagccacttcagcatcagcagctttgtcatcagcagcagcaactgcac
aaccagcaacttcatgtcagacaacaacaaacacagcagcgacagcaccacccctgtcat
caacaagagacgcagcagctcagaatgcgacagcagcagctgcaacaacaacaaagtcat
cagcaacagctgttaaaccagcaccaacaaattaacgcgcaggctgtgtccctgcagcag
cagcagcagcatcacaatttctcttttcacccgggaggtcaatccaacagccaacaacaa
attccccgtgcccagcagcaggttcagcacccactaactgtaagagagccaccgttccat
tcaagggctcttccaagtaagtcttatttggaaagtcaaaatgcttctctgaataggact
tgcttacaaacaccacagcagcagggtagctaccagttgatcaggggaggtcaagccttc
tctgggtccggactggaagactctaacctgtccttccccatgcattcatcgcctatggtt
cactccttgcccacgtgctctgtcagttctgccaatgcttaccaaccggctcagtaccct
gcctaccctggagagccagaaatacccagtctcagtcagcaatctttgtcctcagcctca
gtgtcgaggcccaccaccaccaccacagcaccactcacttctacagtgcctgagctatca
gggacagcatgccagttttcatccacaccacttatgagtcagcagcacactaggacccca
gttagccaggcagaggaatgtcctttccgcgccctacgttgttctggagaagcgcaggaa
agctgcaagtcatccgagatgtttggtgaatctatgagctgctacccaagcatcgccagc
catctgccctctgagcagcctcagagctgcggggttatcaacactaatggatacgaagct
ctgggagacagtctcctgccgacagaggctcaagatggcgacttggagggactggaacct
cctgatctcctgcctgacctactaccccagctggaggatgctttcaggcaacaggacgaa
tccagctgctcttgggccgattccagtcaggagaagggacctgaggacaggaaaccaaca
tctattgaatacaaggaagacaagcctcgaaagaacgctaatggtcccgggagccaggtg
cgggttctcagtcccccaatgaagagcagctcatcgtcctcctcctcttcctcttcgtca
tcatcctcatccagctcctcttcggagaagagggtgcggaggacacatcaacagatggag
tcaactctgcaggacaagcaggaaaaggccaataggataatatcagaggcgattgcaaag
gcccggcagcggggagagaagaacatcccacgggttatgagcccggagagcttccccagc
tcttcatcgcagtacaaggctcaccgtgaccgcgagcacaaaggaaacggcaaggcacgg
tctaaagagaaggcctgcaggaaggcctgcattgtagcctcctccaagcccaagcagaag
gccaagatcgggaaaattgtcatcaagattggaaagaagaaaaagagaaagccagagtcc
tcagaggaggagtcagatgatgctcctccccctcgacacacctcgaagaatgacgattct
aagaggcggtctaatcgccaggtgaagaggaagaaatatgctgaagagctcgaggccagg
ttgtcagacgaggaagtcaaggttatcatgaaagccaagaaaaccaacgctgcatcgtcc
aaaacacccgctcttcaactgtttgtagaaaatcccagtgaagaggacgctgctgtcgtc
gacaaaatcatgtcttctcgggtcgttaagaaggaggtctctgctggagtggtggttgaa
ggggaggagttttttgtcaaatataaaaactactcttacctacactgtgagtgggccacg
gagcagcagctggagaaggacaagaggattcagcagaagatcaaacgcttcaaaacgaaa
caagcacagagggcgctgttcttcgcagatatggaggaggacccgtttaaccctgactat
gtagaggtagacagagtgctggaggtgtcatattgtgaggacaaagacacaggagaggaa
gtggtgtactacctggtgaagtggtgctctctgccttacgaggacagcacctgggagctg
aaggacgatgtagatcagagcaagattgaagagtttgagcagctgcaggcagtcaagcca
gactcgcgcaggacggagcgacctccagccaatctgtggaagaagagggatcagtcgagg
gaatacaggaacggcaacggcctcagggactaccagctcgagggggtcaactggctcctc
ttcaactggtacaacagacggaactgcatcctggcagacgagatgggcctgggaaagacc
atccagtccatcacgttcctggaagagatccagcgcgtgggcatcaaggggcccttcctc
atcatcgccccgctctccaccatcgccaactgggagcgcgagttccatacttggacccac
ctcaacgtcatcgtctaccatggaagcatggtcagcaggcagatgctccagcagtacgag
atctatttcagggatgcgcagggtcgtgtgatacgaggcgcctacaggttccaggccgtt
atcaccacatttgagatgatcctgggaggctgtcccgaactcaacgccatagattggcgc
tgcgtgatcatcgacgaggcccatcgtctcaagaacaagaactgcaagctgctagagggg
ttcaagctcatgagcctggagcacaaggtcctgctgacagggactcctctccagaacaca
gtggaggagctcttcagcctgctccacttcctggagccagcccgcttcccctccgaaaac
accttcatgcaggagtttggagacctcaagactgaggagcaggttcagaagctccaggga
atcctgaagcccatgatgctgcgtcgtttgaaggaggatgtggagaagaagcttgctcct
aaagaggaaaccatcatcgaggtggagctcaccaacattcagaagaaatactaccgcgct
atcctagagaagaatttctccttcctggctaaaggagccggccaggcaaatatgcccaac
ctggtgaacaccatgatggagctgagaaagtgttgcaaccacccctacctcatcaaaggg
gcagaagagaaaatcctcgaggacttccgggaagtgcacagccccactgccattgacttt
cacctgcaagcgatggtacaatctgcagggaagctggtacttattgacaaattgctgcct
aagatgaaggcaggagggcacaaagtgctcatcttctcccaaatggtgcgctgcctggac
atcttggaagactacctcattcagagaaggtacttgtatgagcggattgatgggcgtgtt
cgtgggaacctgcgacaggctgccattgaccgcttcagcaagcccgactccgaccgcttc
gttttccttctgtgtacgagagctggcggcctggggatcaacctcaccgcagcagacacc
tgcatcatctttgactctgactggaacccgcagaacgacctgcaggcccaggctcgctgc
catcggatcggtcagaacaaggcggtaaaggtgtaccggctgatcaccaggaactcgtac
gagcgagaaatgttcgatcgcgccagcctcaagctgggcctggacaaagcggtgttgcag
agcatgagtggccgagataacagcctgggaggaagcaccgggggaggggctgtacagcag
cagctgtctaagaaggagattgaggatctgttgcgacgtggtgcttatggggccatcatg
gatgaagaggatgaaggggccaaattctgcgaagaggacattgaccagatcctccagcgc
aggacgaagaccatcaccattgagtctgaggggcgaggatccacatttgcaaaggccagt
tttgtagcatctggaaaccgcacagacatttctctggatgaccccaacttctgggacaag
tgggccaaaaaggcagacatcgatatggaaatggtcaacggcagaaacagcttggtgatc
gacactcctcgtgtcaggaagcaaacgaggcccttcagtgccaccaaggatgagttagca
gagctttcggagggtgagagtgacagcgacgacaccaaaccgaagctcaggcgaaaccac
gaccgccccaacagctacggccgcacagagtgcttcagagtagagaagaacctgctcgtc
tatggatggggtcgttggaaggatatcctcaaccacggccggtttaagaagcagctgact
gagtgggacgtggagtccatctgccggtccctgctggcctactgcctggtccattaccgt
ggagatgacaaaatcaagagcttcatgtgggacctcatcgctccgactgaagacggacgc
acaaaggagctgcagaatcacctgggcttgtcagccccagtgcctcggggcaggaagggt
aagaaggtgaagatccagtcgagctcttttgacatccacaaagccgagtggctcaggaaa
cacaacccggagcacatgcttcaggacgatggctacaagaagcacctgaagcaccactgc
aacaaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtgataggaatc
caggcggagaaggtgctagacggcgtggactccagtgaggtaaagatctgggtgccggac
cctgaccagtcagagctgcctgccctgtggtgggacgccatctcagacaagtgtctgctg
ctgggtgtctacaagcatggttatgagaagtacaacactattcgtgcggaccctaacctg
tgctttctagagcgagcggggcgaccggatgagaaggccatcgctgccgaacagagaggc
aacgatttcatggatggggatgtggatgatccagaatacaagcctgctccagctctgcta
aaggacgatatggaggatgacgcctcttctcctggagacttggttgtcactgacaacgct
ggagatgcagctccagtgacagaaggtgaatctgcctactggccctccccctcagtgttg
acagccagactgaggcgtctaatcacagcctctcagcgctacaccaagagtcggcagatc
ctgcacatccaccagtcccagtcccaatctcagtcccagtcccaatctcagtcccagtcc
cagtcccaatctcagtcccagtcccagtctcagtcccagcagaccatgatactgtctgct
ccgctctgcccgctgcccgccacactcaacgacaccctcaaccccaagatggctgctaaa
attgaacgtcaacaaagatggaccaggcgggaagaggctgacttctaccgcgtcgtctcc
accttcggtgtcgtgttcgacccgaacctcggccggttcgactggaccaagttcagagcc
atggctcggctgcacaagaagactgacgagagcctgcagaaatacctgtgtgctttcact
gccatgtgccgacgggtgtgtcggctgccgcccaaagagggagactcggcggtggacccg
tctctgaccatccagcccatcacagaggagcgagcgtcgcgcacactgtacagggtggag
ttgctccgccaggtgagggaacaggtccttcgacatcagtttctctacgagcgcctgccg
ctgtgtcagatgagctccgacttaccggtgtggtgggaggccggcgctcacgaccgcgac
ctgctaatcggtgccgcgaagcacggcgtcagccgcaccgattaccacatcctgagagac
ccggagctcagcttcatggctgcccaacgcaactacagccaaacaaaagcctctcagcag
caatcgcgcacatccacccctctgctgcaccctcagctccaggctgccggctcagtgccg
acaggctctccgccgcccccgcccacccagagagacgctgatccctgtgggctcgtgccc
aaagtggaaccagcctcagagggggaggagggcaaggaaaggcggggagagagttggagc
ccctctcgagcaccagctactcccacaggtctggaggagaagccggtttcagtggtgaag
gagaatgagaggcagatggtggcagcgcgaaccaaacccctcacacccaactcgtcagag
aggaaacccaagaaggccagcaagaggggccgcagggaggccaggcacggctccgtgtcc
gactccgacggctcctcctcaagctcttcgtcgcgctcctcttcctcctcctcatcttcc
tccgcttcctcatcacattccggatcaagctcctcgtcctcgtcatcatcttgctcctct
ggctcttcgtcatcctcctcctcctcctcgtcttcctccgatgacagtgaaagtgaaggg
gaggaaaggaagaagaaagtgcctgcagcaacaactgtaaagggctttgacgaggacagc
gtggcgtctctgatcacgacacaggatgaaacgcaagacacccacgtggctgagaacggc
atcaccaacaacaactcctctcaacctttccagggaggagggtacatgctcgcggcatcc
tactggccaaaggatcgagtgatcatcaaccgcctggacagcatctgccaagcagtgctg
aagggcaagtggccgggaacacgtcgggtctacgagcctggaggcgccgtgacctccttc
tacaccaccaagctgctggacaacgccaacagcctatgcgaggacccctctgcctcgcca
caggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactcaac
gatcaggaaggaggtctgaagttgaccttccagaagcagggtctacctctgaagaggccc
ctggagacggaggaaggcccccaggcgcagcagcagtacctggcccggctccacgagctg
cagagtgcctcggacacgggcctcgccgacatcaccaagcctcagtgcagcttccagact
gttccttcaggtctcaccggtcagatgaggttgaacggagcagtggacggccagccggtg
gtgaagaggcgaagagggaggaggaagaacgtggaggggatggacctgctcttcatgaac
aggagtcgagtccctgctgttcccgatcaggtgcctcccgggtgggggggtatcggccag
gtgggcatggccgcggccgtgccgggcttcagccagggctccggccaggtccccgcggac
accgagagcagggtccccgttatcaacctcaaagacggcacgcggctcgccggggacgac
gccccccggaggaaagacctggaacagtggctgaaagagcacccgggcttcgtggcagac
acgggagccttcatccccggggtaaataagatgcaaatgcagttccacttccaggacggt
cggccgaagcagaagaggcatcgctgcaggaaccccaacaagatcgacgtcaacagtctg
acgggagaggaacgagttcagatcatcaacaggagaaacgcacgcaaggtcggcggagcc
ttcgctcctcctctcaaagatctgtgccgcttccttcaggagaaccccgagtacggagtc
ccgcccgaatgggccgacgtggtgaaacagtcgggttacctcccagagagcatgtttgac
aggatcctgacgggacccatcgttcccgaggaagtgagccggcgcggacgtcgacccaag
aaccctctggccaaggcggcggcggcgacggcggcaccgaacccggcggcctcggctctg
ggcctgaaccccctgctggccaacggcctcctctccgggatggacctcaccagtctgcag
gccttccagcaaaacctgcagagtttacagtccctgcagctcaccgcgggcctgatgggg
ctgccgtccgacgccggcaacctggccgcgagcaacttggccgccatgtttcccatgatg
ctgtccggtatggccggattgccgaacctgctcggcatgagcagcttgctcgggaagccc
gctcaggaaggcgccggcggctccgacgagaagacgaagggagccgccgccgccggcgtc
ggagcgggagagccgtctgcctctaaagcccccccccacacctcagacaccaaaggagaa
aggacagagggctcgaacacgactccttcctccacttccagctccgcttcctctgccacc
gccacacaaagtgcttcagctgcctccgcagcctccggtcacccactgtctcttaacccc
ttgttactctccagtatgctttacccagggatgcttctcactccaggccttaaccttcct
gtgtctgccgcacagccgcagagctcaaacactgaccccgccctcccgcccgccgctcct
cttcctcctcctccgccgccagcctcccagtcatcgccgcagcggacggagcagccacag
gcggagaaggacggagaggaggaggaggaggaggaggacgaggaccaggcattggatgac
gaagaggaggaggaggaatccgcagaacaaaaggagaacagtggtcccgacggttcaggg
aaagccgagtcatcttcatcagagtctgggagctcttcctcatcctcagacgattcagac
tccagtgacgaggactga
DBGET
integrated database retrieval system
