Brachyistius frenatus (kelp perch): 138616414
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Entry
138616414 CDS
T10614
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138616414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfre03021
]
138616414
03036 Chromosome and associated proteins [BR:
bfre03036
]
138616414
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138616414
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
138616414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138616414
NCBI-ProteinID:
XP_069546784
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MSAGSKRRRATSPSSSISGGGDVDDASSSTPGSGRKRRRISNVPPVDTIAVCHELFNAVR
DHKDDQGRQLSDIFLRVPKRRNQPDYYEVVSQPIDMTKIQYKLKSEDYNDVEQLTADFQL
MFNNARSFYKSGSEEYQAARKLWEVYLQTRTEFVQPGDGDEDDEDGDDMMDNPGMSTEDE
TSSGSLKEVLEQLLEAIVSHTDPSGRLISELFQKLPSKVHYPDYYAIIKEPIDLRTIAQR
IQMGFYKTVNSMAKDIDLMAKNAKAYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSS
LRIRYQKTILLLKVFSCCQNKSATYCLTENRFVHDAHVWFVSLLSQFRNRRSGQGDRLSG
VSVALQYGSESEEDPVLSGSICYDEGESEAESQSSSMEMSNPIFQLYEAVRGARNNQGQV
FAEPFQQLPSRREYPDYYQQIKQPICLQQIRAKMKNGEYESVEQMEADLTLMFENAKCFN
MPNSSIYKRAFRLQQIMQAKKRELLRRDDEDGDSILSSDAGSIKRKSHKKNVKKNRMKAL
YAAVTEAREAGTNRRLCDLFMVKPSKKDYPDYYKVILEPMDLKTIEHNVRNERYTTEEAL
MEDMRLMFRNARHYNEEGSQVYNDANVLEKILKDKRKELGPPPEEDGVGSPKLKLRKSGV
SPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRAELPDYYATIKRPIDME
RLRSHMAAGRYQDVEALVEDFALMFNNACMYNEPESLIYRDALMLHRVLLETRKQQEGGE
DSGPPAVAPLVRELIRNLFVSVMGHQDEEGRCYSDSQAEIPAVDPAAPEKPPLNFDVIRM
NVDRGRYRRLDIFQEHMFEVLEKARRLHRTDSEIFEDAVELQQFFIKIRDELCKNGEILQ
SSAVNYTSKHLHSDVDQEKREKIPKEIEEDKQKKEEEDNKDDEKAEDLRGEAWQSQSDSA
RVYSQDCSFENRTYHVGDFVYVEPSEPTLKPHIVCIERLWEDEAGEKWLYGCWFYRPSET
FHLATRKFLEKEVFKSDYYNKVSISKVLGKCVVICVKDYFKMQPEGYRAEDVYVCESRYA
ARNKSFKKIKIWAMPESNVKLVLREVPLPVVRVASMFAKPDQEKLTMSYTDSSSFMDKER
EDVPTEMSGAEPGCQYYEQLRYNNVWFKVGDCIYIQSHGLSKPRVARIEKLWVQNGTTYF
FGPIFIHPEETEHEPTKMFYKREVFLSPLEETLPMTCVTGKCTVSSFKDYLSCRPTESSE
DDVLLCESRYIETEKQMKKFKGLKRFSYSSKVVEDEIYYFRKLMVPQKEASPFLDKKINE
LEVKLADIEDADDDMEDMDDDEEAPETPSLPQMQISHATDMDIIPYTPSQTTPKVKGLSK
KEGAKRKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEASKKAEYEERAA
KIVEQQERDRPPQKQASPRAGTPVGALMGVVPSPSTMGMINQTMTPVSGMMGGYGPPYMP
MQGPHEGLLSVAPMLTHPAGGPHLPPHHLQQGMPGYPGMPHQGMMGTGMNGMAGSPGQGN
FMQQPGMFSPGQHAPPPYPGQGQLGQPSHLQPTTPMFVAPPPKTQRVLHSEAYLKYIEGL
NSESSTISKWDQTLKAQRRDAHLTKEQESRLPAHWLKSKGAHTTMADALWRLRDLMLRDS
LNICQAYNL
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggctccaagaggaggagagccacttctccctccagcagcatcagcggagga
ggagacgtggatgacgcctcgtcttctactcctggaagcggcagaaaaagaagacgaatc
tccaatgttccccctgtagatacgattgctgtatgtcacgagctgttcaacgctgtcagg
gaccacaaggatgatcaagggaggcaactcagtgacattttcctcagggtaccaaagaga
aggaatcagcctgattattatgaagtggtgtcccagccgattgatatgacaaaaattcag
tataaactgaagtcagaggattataatgatgtggagcagctcactgcagattttcagctt
atgttcaacaatgccagatcattttacaagagtggcagtgaagagtatcaagctgcacgc
aagctgtgggaggtatatttgcaaacaaggactgagtttgtgcagcctggggatggagat
gaggatgacgaagatggtgatgatatgatggataacccaggaatgtcaactgaagatgag
acctcatctggcagtttgaaggaagtgttagagcaactcttggaggctatagtgtcacac
actgatccctcagggcgtctgatcagtgaactgttccagaaactgccttccaaagtgcat
tacccagactactatgccattataaaggagccaatcgatctgagaacgattgctcaaagg
atacagatgggattctataaaactgtcaattctatggccaaggacattgacctgatggcc
aaaaatgccaaagcgtacaatgaaccaggatctcaggtttttaaggatgccaacaccata
aagaaagtcttcattcagcgtaagactgaacttgaacacgctgaacctactaaatctagt
cttcgcatcaggtatcaaaaaacgattttgttacttaaagtgttttcttgttgtcaaaac
aaatcagcaacgtattgcttgacagaaaacagattcgttcatgatgcacatgtatggttt
gtgtctttactgtcacaattcagaaatcgaaggtctggtcagggggatcgactttctggc
gtcagcgtagctcttcagtatggctcagagagcgaagaggatcctgtgctctcgggctct
atatgctatgacgagggtgagtccgaggctgagagccagagttcaagtatggaaatgagc
aaccccatatttcagctgtatgaagctgtgaggggtgccaggaacaaccagggccaggtc
ttcgccgaaccctttcagcagctgccttctcgcagggaatatcctgactattatcaacag
ataaaacagcccatctgcctgcagcaaatcagggcaaagatgaagaatggcgagtatgaa
agcgtagaacagatggaggctgacctcactctgatgtttgagaatgcaaaatgcttcaat
atgcctaactcaagcatttacaaacgggccttcaggcttcagcagatcatgcaggcaaaa
aagagggaactcctaaggagagacgacgaagacggagacagcattctgtcatctgatgca
gggagcatcaagagaaaaagccacaagaaaaatgtcaaaaagaatcgaatgaaagccctt
tatgctgctgtgactgaagccagggaggcaggcaccaatcgacgtctctgtgatcttttt
atggttaaaccatccaagaaggactacccagactactataaagttatcctcgaaccgatg
gaccttaaaaccattgagcacaacgttcgcaatgaacgctacaccacagaggaggctctg
atggaagacatgaggttaatgtttcgcaacgctcggcattacaatgaggagggatctcag
gtatacaatgatgctaacgttttggaaaagatactgaaagacaagcgcaaggagttagga
cctccacctgaggaggatggtgtgggatctcccaaacttaaactaagaaagagcggtgtt
tctccaaagaagtccaaatatctcacccctcttcagcagaggttaaatgagctctacgat
gctgtgcgaaacttcactgaccgtcgcggtcggcgtctgagcacaatcttcctccggctg
ccctctcgtgccgagctgcccgactactacgccaccatcaagaggcccatcgatatggag
cgtctgcggagccacatggcggcgggccgttaccaagatgtcgaagccctggtggaggac
tttgctctcatgttcaacaatgcctgcatgtacaatgagccagagtctttgatctatcgg
gatgctctaatgttacacagagtgttgctggagacacgcaaacaacaagagggaggggag
gactctggacctcctgctgtggcacctctggttcgagagctgatcaggaacctgtttgtc
tccgtgatgggccaccaggatgaagagggtcgatgctacagcgactcgcaggctgagatt
cctgccgtggatccagctgctcctgaaaagccaccacttaactttgatgtgattaggatg
aacgtggaccgtggccgctacaggagactggacatcttccaggaacacatgtttgaagtg
ctggagaaggcaaggaggctacacaggacagactctgagatatttgaagacgcagtggag
ctgcagcagtttttcatcaagatcagggatgaactctgcaagaatggagaaattctgcag
tcttctgcggtcaactacacatcaaaacacctgcatagtgacgtagaccaggaaaagagg
gagaaaattcccaaagagatcgaggaggacaagcagaagaaagaggaggaggacaacaaa
gatgatgagaaagctgaggacctgcgaggagaagcgtggcagtcacagtcggactcggcg
cgggtttatagtcaggactgcagctttgaaaatcgtacctaccatgtgggggactttgtc
tatgtggagccgtcagaaccaactctaaagccccacattgtctgtattgaacgtctgtgg
gaggatgaagcaggtgagaagtggctctatggctgctggttctatagacccagtgaaacc
tttcatttggccactcgcaagtttctggagaaagaggtctttaagagcgactactacaac
aaagtgtccattagtaaagttctgggcaaatgtgtggtcatttgtgtgaaggattatttc
aaaatgcaacctgagggctacagagcggaggatgtctacgtctgcgagtcccgctacgct
gccaggaacaagtcctttaagaagattaagatatgggccatgcccgagagcaatgtgaaa
ttggtccttcgtgaggtgccgctgccggttgtccgtgtagcctccatgtttgccaagccg
gaccaggaaaaactgacaatgtcgtacacagacagtagcagttttatggacaaggagaga
gaggatgttcctacagagatgagtggagcggagcctggctgtcagtactatgaacagtta
cgctacaacaatgtgtggtttaaagtgggagactgtatttacattcagtcacacggtctg
tcaaaacccagggttgccaggatagagaagctgtgggtgcagaatggaactacttacttc
tttggacccatcttcattcatcctgaggaaacggagcacgagcccacaaagatgttctac
aagagagaggtgtttctgagtcccctggaggagaccttgcccatgacctgtgtcacaggc
aaatgtacagtgtcctcttttaaggactacctgtcatgcagacctaccgagtcctcagaa
gatgatgtcctcctgtgcgagagccgctacattgagaccgagaagcaaatgaaaaagttc
aaaggtctaaaacgcttctcgtactcttccaaagtggtggaggatgagatctactatttc
aggaaattaatggtgccacagaaggaagcatctccctttttggacaagaagattaatgag
cttgaggttaaactggcggatattgaggatgcggatgatgatatggaagacatggatgat
gatgaggaagctccagagacaccttctttgcctcagatgcaaatctcgcatgcaaccgac
atggacatcatcccttacacaccttcacagacaactcctaaggttaagggcttatcaaaa
aaggaaggggccaagaggaagatcaacatgagcggctatatcctgttcagcagtgaaatg
cgagcagtcatcaaagctcggcacccagacttttctttcggggagctgagtcggctggtt
ggcaccgagtggaggaacctcgaagcttccaagaaagcagagtatgaagaacgtgcagcc
aaaatagttgaacagcaagagcgtgacaggccaccccagaagcaagcatccccgagagca
ggtacccctgtaggggcactgatgggggtggtgccttcgcctagcacaatgggaatgata
aaccagaccatgacacctgtgtcaggcatgatgggaggttacggcccgccttacatgccc
atgcagggccctcacgagggtttgctgagtgtggccccaatgttaactcaccctgcaggg
ggtcctcacctgcctcctcaccatctccagcaaggtatgcctggataccctggcatgcct
catcagggtatgatgggcactggtatgaatggcatggcaggaagtcctggacaaggaaac
tttatgcaacagcctgggatgttcagcccagggcagcatgctcctccaccatatccagga
caaggccagttaggccagccctcacatttgcagcccaccactcccatgtttgtggctcct
ccgccaaagacccagagggtcctccactccgaggcctacctgaagtacattgaggggtta
aattcagagtctagcaccatcagcaagtgggaccaaacgctcaaagctcaaaggcgagat
gctcatctgaccaaagaacaggagagtcggctgccagctcactggctgaaaagcaaagga
gcccacaccaccatggcggatgcactctggcgtctgcgtgacctgatgctgagagactct
ctgaacatctgtcaggcttacaacctgtaa
DBGET
integrated database retrieval system
