KEGG   Brachyistius frenatus (kelp perch): 138616425
Entry
138616425         CDS       T10614                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
bfre  Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bfre03009]
    138616425 (rrp9)
Ribosome biogenesis [BR:bfre03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    138616425 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WDR54 WD40_like
Other DBs
NCBI-GeneID: 138616425
NCBI-ProteinID: XP_069546809
LinkDB
Position
Unknown
AA seq 519 aa
MSSSFFIKKKETPKFAKKEKNTALLKRKGDGDSAGKSKVRAKKPNSKYNEEISSDSETES
STVPKKRQSKDDYEYEETPQEKKLRLAKLYLEQLKEEEENKAEEDCFETDLIAGRLQEEV
LEQKGKLQRLIAKDLVPPDPSEIRVFRGHKLPITCLVITPDDKCIFSAAKDCSIIKWHVE
SGKKLHTIPGGRKGTGDRHIGHTAHILCMAISSDGKYLATGDMNKLIMIWEAETCKHLYR
FTGHKGPVSGLSFRKGTHDLYSASHDRSVKVWNVDENAYVETLFGHQDAITGLDSLSREC
CVTAGGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHIITGADDGSVSLWSVNKKK
PLSTVKQAHGFHGDTGLEQPHWVSSVAALQNSDTVASGASSCSQNSLVNVWKCGQNYRGM
EPLFSVPVSGFVNSLKFSSSGQFLVAGVGQEHSTETVNCRLEETRYSLALCAVAVSSCNA
ELVCLNRQVGPMVETKRSQEWDLCYSSEKETFKSRGSQD
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtcttcgtctttcttcataaagaaaaaagaaacccccaagtttgccaaaaaagaaaaa
aacacagcgctgctaaaacgaaagggagatggggactcggctggaaagagcaaagtacga
gcgaagaaacccaactccaaatacaacgaggagatttccagcgattctgagaccgagagt
tccacagtgcccaagaaaaggcagtccaaggacgactatgaatatgaggaaactccgcag
gagaagaagctcagacttgctaaactttaccttgaacaactgaaggaagaagaggaaaat
aaagcagaagaggactgctttgagacggatctgattgcgggaagacttcaggaagaagtg
cttgaacagaaaggaaagctccagcgacttattgccaaagatctcgtaccaccagatcct
tcagagatcagggtgttcagaggacacaaacttcccattacctgtctggtcatcacacca
gacgacaagtgcatattttctgctgccaaagactgctccatcattaaatggcatgttgag
agtggtaagaaactgcatacaatacctggtggaaggaagggtacaggggaccgccatatt
ggacatacagcccacatcctgtgtatggccatatcatcagatggaaaatacttggccaca
ggagacatgaacaaactgattatgatttgggaggcagaaacctgtaaacatctatataga
tttacaggacacaaaggccctgtgtcgggtctgtcattcaggaagggaactcacgatctg
tacagtgcctctcatgaccgctcagtcaaggtgtggaacgtggatgagaatgcatatgtg
gaaactctctttgggcatcaggacgctatcacagggctggacagcctgagccgcgagtgc
tgtgtgactgcggggggacgggaccgcacggtgagggtgtggaagatcgcagaggagtct
cagctggtgttccacggccacgagggttcaattgactgcatccagctcataaatgaggag
cacataataacaggagccgatgatggctccgtgtctctttggagtgtcaacaagaagaag
cctctcagcacggtgaagcaggctcacggtttccatggcgacactgggctggagcagcct
cattgggtctcttcagtagccgcacttcagaactcggataccgttgcctcaggtgcctcc
agctgttcccaaaactcgctagtgaacgtgtggaagtgtggccaaaattatcgtgggatg
gagcctctattcagtgtaccagtgtctggttttgtcaacagtctgaagttttcaagctcc
ggtcagttcttggtggctggagttggacaggagcacagcacagagacagtaaactgcaga
ctagaagaaacaagatattctcttgctttatgtgccgtagcagtatcaagttgtaatgca
gaactcgtttgtctcaacagacaggttgggccgatggtggagactaaaagaagccaagaa
tgggatctatgttattcctctgaaaaggaaaccttcaaatccagaggaagccaagattaa

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