Brachyistius frenatus (kelp perch): 138616544 Help Entry 138616544         CDS       T10614                                  Symbol col2a1b Name (RefSeq) collagen, type II, alpha 1b   KO K19719   collagen type II alpha Organism bfre  Brachyistius frenatus (kelp perch) Pathway bfre04510   Focal adhesion bfre04512   ECM-receptor interaction Brite Glycosaminoglycan binding proteins [BR:bfre00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138616544 (col2a1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  138616544 NCBI-ProteinID:  XP_069547020 LinkDB All DBs Position Unknown AA seq 1491 aa AA seqDB search MFSFMDSRTVLLLVATQVCLLAVVRCQEADDQEDAFSCIQDGQRYSDKDVWKPEPCRICV CDTGTILCDEIVCEELKDCPKPEIPFGECCPICAADQSTSIGAPGAKGQKGEPGDITDVV GPRGPAGPMGPSGEQGHRGARGDKGEKGGAGPRGRDGEPGTPGNPGPPGPPGPNGPPGLG GNFAAQMAGGFDEKSGGAQMGVMQGPMGPMGPRGPPGPTGSPGPQGFQGNPGEAGEPGQS GPMGPRGPSGSPGKPGDDGEAGKPGKSGERGPTGPQGARGFPGTPGLPGIKGHRGYSGLD GAKGETGAVGSKGEAGAPGENGAPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPP GPVGPSGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSSGPSGASGNPGTDGIP GAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGELGPG GLQGAPGPQGEEGKRGPRGEPGAAGPLGPPGERGSPGNRGFPGQDGLAGPKGAPGERGPS GASGPKGANGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGGAGEDGRPGPPGPQGAR GQPGVMGFPGPKGATGEPGKSGEKGLSGAPGLRGLPGKDGETGAGGPPGPAGPAGERGEQ GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEGGAAGATGPRGERGFPGERGAAGPQGLQ GPRGLPGTPGTDGPKGAIGPAGTAGGQGPPGLQGMPGERGGAGIPGPKGDRGDLGEKGPE GASGKDGGRGLTGPIGPPGPGGPNGEKGESGPSGPSGAPGTRGAPGDRGETGPPGPAGFA GPPGSDGQPGIKGEQGESGQKGDAGAPGPQGPSGAPGPAGPTGVYGPKGARGAQGPPGAT GFPGAAGRVGPPGPNGNPGAAGPAGSPGKDGPKGVRGDGGPPGRQGDAGLRGPAGTPGEK GDAGEDGPPGPLGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGGAGDR GPPGPVGPPGLTGPSGEPGREGNSGSDGPPGRDGSAGIKGDRGNTGPVGAPGAPGAPGAS GPVGPTGKQGDRGESGAQGPAGPSGPAGARGMPGPQGPRGDKGEAGEGGERGQKGHRGFT GLQGLPGPPGQSGDQGATGPAGPSGQRGPPGPVGPAGKDGSNGLPGPIGPPGPRGRSGET GPAGPPGNSGPPGPPGPPGPGIDMSAFAGLGQIEKSPDPLRYMRADQASGNLRQHDVEVD ATLKSLNNQIENIRSPEGSKKNPARTCRDLKLCHPDWKSGEYWIDPNQGCTIDAIKVFCN METGESCVYPKPSSIPRKNWWSSKSKDRKHVWFGETMNGGFHFSYGDDNLAPNTAAIQMT FLRLLSTESSQNLTYHCKNSMAYMDASTGNLKKAVLLRGSNDVEIKAEGNSRFTYSVMED GCTKHTGQWGKTVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGSVCFL NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttatggattccaggactgtactgctacttgtagcaacccaagtttgtcta ttagccgttgtaagatgtcaggaggcagacgaccaggaggatgcttttagctgtatacaa gatggacagcgttatagcgacaaggacgtatggaaaccagagccttgtcgcatctgtgtg tgcgacactggaaccatcctgtgtgatgaaattgtctgcgaggagctaaaagactgcccc aaacctgaaatcccatttggagagtgttgccccatctgcgctgctgaccagtctacgtcc attggagcacctggagctaagggtcagaagggcgaacccggagacattacagatgttgtt ggaccaagaggaccagctggcccaatgggcccatctggagagcaaggacaccgcggagcg agaggagacaagggagaaaagggaggtgctggtccccgcggcagagatggtgagcctggc acccccggaaaccctggtccccctggacctccaggacctaatggaccccctggccttggt ggaaactttgctgctcagatggctggtggtttcgacgagaagtctggcggtgcacagatg ggtgtgatgcaaggaccaatgggccctatgggacccagaggaccacctggccccactgga tcacctggtccacaaggtttccaaggcaacccaggagaggctggagagcccggacaatct ggccccatgggtccccgtggcccctctggatctcctggaaaacctggagatgatggtgag gctggcaaacctggaaaatcaggcgagcgtggacctactggacctcagggagctcgtgga ttccccggaacgcctggtctgcctggcatcaagggacacagaggttattcaggacttgat ggtgcaaagggagagactggagctgttggttctaagggtgaggctggtgctcctggagag aatggcgctcctggacctatgggaccacgtggtttgcctggtgagagaggacgtcctgga cccagtggagctgctggagcacgtggaaatgatggcttgcctggccctgctggtcctcca ggccctgttggtccttctggagctccgggctttcccggctctcctggttcaaagggagag gctgggcccacaggtgctcgtggacccgagggtgctcagggacctcgtggagagtctggc actcctggatcatccggaccttctggtgcttctggcaaccctggtaccgatggtatccct ggagctaaaggatcagctggtgctcctggtatcgctggtgctcctggtttccctggacca cgtgggcctcccgggcctcagggagcaactggacctctcgggcctaaaggaacatctgga gacccgggtattccagggttcaagggagaggctggccccaaaggagaacttggaccaggt ggtcttcaaggagctcctggcccacaaggagaagaaggcaagaggggacccaggggtgag cctggtgctgctggaccacttggacctcctggagagagaggatcccctggtaaccgtggt ttccctggtcaagacggtctggctggtcccaagggcgcccccggtgagcgtggaccctct ggagctagtggtcccaagggtgctaatggtgaccctggccgtcctggagagtctggtctg cctggtgccaggggtctgactggacgccctggtgatgccggtcctcaaggcaaagttgga ccttctggaggtgctggtgaggatggtcgtccaggaccccctgggccacagggagcccgc ggacagcctggcgtcatgggattccccggccccaagggagcaactggtgaacctggcaag tctggtgagaaaggactgtctggagctcctggtctgagaggtctacctggaaaagatgga gaaaccggcgctggtggacccccaggccctgctggccctgctggagagagaggagagcaa ggacagcctggtccctcaggcttccagggtcttcctggacctcctggcccccctggtgag ggaggcaagccaggagaccagggtgtccctggagagggtggagctgctggtgccactgga cccagaggagagcgtggtttccccggagagagaggagccgctggccctcagggtctgcag ggacccagaggtctgcctggaactcctggaactgacggacccaagggcgctattggacct gccggtactgccggtggtcagggaccccccggtctacaaggtatgcccggagagagagga ggtgcaggcattcctggacccaaaggagacagaggtgaccttggagagaaaggacccgaa ggtgcttctggcaaagatggtggcagaggtctcactggtcccattggtcctcctggtcct ggtggtcccaatggtgagaagggtgaatctggtccctctggtccctctggtgctcctggt acccgtggtgctcctggtgacaggggagagactggacctcctggacctgctggttttgct ggaccccctggttcagatggtcagcctggaatcaagggagagcagggagaaagtggacag aagggtgacgctggtgcccctggaccccaaggaccatccggtgccccaggacctgcaggt cctacaggtgtttatggacctaaaggtgcccgtggtgctcagggacctcctggtgccact ggtttccctggagctgctggccgagtcggaccccccggccccaatggtaaccccggagct gctggtcctgcaggctctcctggtaaagatggacccaagggtgtgaggggagatggtgga cccccaggcagacagggtgacgctggactccgtggtcctgctggaactcctggtgagaag ggagatgctggagaggatggtcctcctggacccctaggtccttcaggtcctcaaggattg gctggtcagcgcggtattgttggtctacctggacagcgtggtgaaagaggtttccctggt ctgcctggaccctctggtgagcccggaaagcagggaggacctggtggtgctggagaccgt ggaccccctggacctgttggaccacctggactcactggaccttctggagagcctggcaga gagggcaactccggatctgatggacctcctggtagagatggttctgctggaataaagggt gatcgtggtaacactggtcctgttggtgctcctggcgctccaggtgctcctggtgcttct ggccccgtgggtcccaccggcaaacagggagacagaggagagtctggtgcacaaggacct gctggaccttcaggacctgctggagccagaggaatgcctggaccccaaggacctcgtggc gacaagggtgaggctggagagggaggtgagaggggacagaagggacacagaggcttcact ggtctgcagggtctccccggacctccgggtcaatctggagaccagggtgctactggacct gctggaccttctggacaacgaggaccccctggacctgttggccctgctggaaaggacggt tcaaatggtctgccaggacccattggaccccctggacctcgaggtcgcagtggagagacc ggtccagctggtcctcctggaaactctggacccccaggtcctcccggccctcccggccct ggcattgatatgtctgccttcgctggtctgggtcagattgagaagtcccctgatcctctc aggtacatgagggccgaccaggcttccggaaacctccgtcagcatgacgtcgaggtcgac gccacactcaagtctctcaacaaccagattgagaacatccgcagcccggagggatccaag aagaaccctgctcgcacctgcagagacctgaagctctgccatcccgactggaagagcgga gagtactggattgatcccaatcagggctgcaccatcgatgcaatcaaggtcttctgcaac atggagacaggggagtcctgcgtgtaccccaagccttccagcatccctcgcaagaactgg tggtccagcaagagcaaggaccgcaaacatgtctggttcggagagacaatgaatggagga ttccacttcagctatggtgacgacaacctggcgcccaacaccgccgccattcagatgact ttcttgagactgctgtccaccgagtcttctcagaacctcacctaccactgcaagaacagc atggcctacatggacgcctcaacaggcaacctgaagaaggccgtgctgctgcggggctcc aacgacgtggagatcaaagccgagggcaacagccgctttacctacagcgtgatggaagac ggctgcacgaaacacacgggacagtggggcaagacagtgatcgaatacagatcgcagaag acctctcgtctgcccattgtggacattgcccccatggatattggtggagcagaccaggag ttcggagttgacatcgggtcggtctgcttcttgtaa

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