Brachyistius frenatus (kelp perch): 138616594
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Entry
138616594 CDS
T10614
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre00260
Glycine, serine and threonine metabolism
bfre00630
Glyoxylate and dicarboxylate metabolism
bfre00670
One carbon pool by folate
bfre01100
Metabolic pathways
bfre01200
Carbon metabolism
bfre01230
Biosynthesis of amino acids
bfre01240
Biosynthesis of cofactors
bfre04981
Folate transport and metabolism
Module
bfre_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
138616594 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
138616594 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
138616594 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
138616594 (shmt2)
Enzymes [BR:
bfre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
138616594 (shmt2)
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Ortholog
Paralog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
138616594
NCBI-ProteinID:
XP_069547125
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLSFALRQLARPLCQRSPVRLGGRGQQSHAATRAVDEDRLWTGQESLAQDDPEMWDLLQK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPAQWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNTATGLIDYDQLEMTAKLFRPKIIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGVVAAKVIPSPFEYADLVTSTTHKSLRGSRSGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKEYIIQVLKNSKAMAA
ALLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELASITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKQTGKLQDFKNFLLQDPEAAARIA
DLRRRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctctgagacaactcgcacggccactgtgccagcggtccccggttcgt
ctcggcgggcgtggccagcagtcccacgccgccacccgagcagtggatgaagatcgtctg
tggacgggtcaggaaagcctggctcaggatgaccccgagatgtgggatctgctgcagaaa
gagaaggacaggcagtgtcgcggtttggagctcattgcatctgagaatttctgcagccga
gcagctctggaagctcagggctcctgtctgaacaacaaatactccgaaggctacccagga
agaaggtactatggtggagcagaggtagttgaccaaatcgagctactgtgtcagaagcga
gccctggaggccttcgacctggatccagctcagtggggcgtcaacgtccagccatactct
ggttctcccgctaacttcgctgtctacactgccgtgctcaacccccacgaccgtatcatg
ggcctggacctgcccgatggaggacatctgacccatggctacatgtctgatgtgaagagg
atctctgcaacgtcaatctattttgagtcaatgccctacaagctgaatactgcaacagga
ctcatagactacgaccagctggagatgacggccaagctgttccggcccaagatcatcatc
gctggcaccagtgcctatgcccgcctcattgactatgcccgaatcaaaaagctgtgcaca
gacattaaggcgtacatgcttgctgacatggcacatatcagtggcgtggtggcagccaaa
gtcataccttccccctttgaatacgctgacctggtcacctctaccacccacaagtctctc
agaggatccaggtctggcctcatcttctaccgtaagggtgttcgctcagtggacaagaag
ggaaaggaaatcatgtacgacctcgaggacaaggtcaacttttctgtcttcccctccctg
cagggtggacctcataaccatgccattgctggtgtagctgtggcactcagacaggcccag
tctcctatgttcaaggagtatatcatccaggtactaaagaactccaaggctatggctgca
gctcttctcagcaaaggctacaccctcgtatcaggcgggaccgacaaccacctggtcctg
gtggacctgcggccgaagggcattgatggggctcgggctgagagggtgctggagcttgcg
tcaatcactgccaataagaacacctgtcccggggacaagagcgccctgactcctggtggc
ctcaggctgggcgctccggccctgacctccagacagttcaaagaggccgactttgtgcaa
gttgtcgagtttatggacgagggtttcaagatcgccttggatgtcaagaaacagacggga
aagctccaagacttcaagaacttcctccttcaggacccggaggccgcggctcgcatcgca
gacctgcgccgacgtgttgaagcgtttgcaaggcccttccccatgccagggttccacgac
cattag
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