Brachyistius frenatus (kelp perch): 138616634
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Entry
138616634 CDS
T10614
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138616634 (smarcd1)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138616634 (smarcd1)
PBAF complex
138616634 (smarcd1)
GBAF(ncBAF) complex
138616634 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138616634
NCBI-ProteinID:
XP_069547190
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAARGGFQSAPTVGGGGTMGPGPPVPGVGPGMGPGTPSGRMGPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGNSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLNFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcggcaccgacggttggtggaggaggaacaatggga
ccaggaccgccggtaccgggcgtaggaccaggcatgggacccgggacgccttccggaaga
atggggccgtcgtcggccgcgcagaaccacatgtaccgctctccgatgcccgggcccggg
tacccgagacctggcatgcctccatccagccgtatgacaccgcagggacctgccatgggc
cccccaggatacggcaacagccccgtgtctcgcccggggatgcctggcgtgatggacccg
tcacgtaagaggccggctccccaacagattcaacaggttcagcagcagaaccgcaaccag
cacacaaagaagaaaaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctacttgcttttgagaggaagctggaccagactatc
atgcgcaagaggctggacattcaggaggccctcaagaggcccattaagcaaaagagaaag
cttcggatcttcatatccaacaccttcaaccctgcaaagcctgatgctgaggatggagaa
ggcacagttgcatcatgggagcttcgtgttgaggggcgtctgctggaagatacggccgtg
tccaagtatgaagctaccaaacagaagaggaagttctcctccttcttcaaatccctggtg
atcgagctggacaaagacctgtatggtccagataaccacctcgtggaatggcacaggact
gccaccacccaggagactgatggtttccaggtgaagaggccaggtgatgtgggagttcgc
tgcaccgtcctgctcatgctggactaccagcctcctcagttcaagctggacccccgactg
gctcgtatgttgggtatccacacccagaccagacctgtcatcattcaggccctgtggcag
tacgtcaagacccacaaactccaagacccacatgagcgcgagttcatcaactgtgacaaa
tacctgcagcagatctttgagactcagcgaatgaagttctctgagatcccgcagcgcttg
catgcactcctcatgcccccagagcccatcattatcaaccatgtgatcagtgtggacccc
aatgaccaaaagaagactgcttgctatgatatagacgtggaggtggacgacacgctgaag
acccagatgaactccttccttctctccacagccagtcagcaggagatagcaggactggac
aacaagatccatgaaaccatcgagaccattaaccagctgaagacccagagggagttcatg
ttgaacttcgccagagatcctcagggcttcatcaacgactggctgcagtcccagtgcaga
gacctcaaaaccatgacggatgtggtaggaaacccggaggaggagcggagagcagagttt
tactaccagccgtgggctcaggaggcggtctgtcgctacttctactccaaggtgcagcag
aggcgacaggagctggagcaggcgctcggcatcagaaacacctaa
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