Brachyistius frenatus (kelp perch): 138616814
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Entry
138616814 CDS
T10614
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03430
Mismatch repair
bfre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138616814 (pms2)
03460 Fanconi anemia pathway
138616814 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138616814 (pms2)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
138616814 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
138616814
NCBI-ProteinID:
XP_069547459
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MSDACSEPAGAIKAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVKLKECGV
EQVEVSDNGKGVEEDNFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVL
TCHESSQVGTKLVFDHKGHLVQRSPHPRQQGTTISLQQLFSTLPVRHKEFQRNIKKEYAK
MIHVLQSYCIVSTGVRITCSNQNGQGKRSTVLSTSGSQNMRDNIGAIFGPKQPQSLLPFQ
QVSPTENIIEEYGLKEEELPKQLFSITGFVSRGDHGVGRSATDRQFFFINNRPCDPLKVT
KLVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLITMY
EAGVNKISLNYTPIPSTNATSKLCQLALSKKNEAEPGEDIRTVIPSPKSSMNLAGLKAAF
SNHYSSNSGNKSSAEKGSTSGPMQKTLQSFFKDSVTPSAVNQSVKSPVKPTTEAAKCSPV
GKSVLDGFRYGRTPCCDTDSEKDSVTVSSCDSTMAAPDIHCSDLEFSSPKPMIDSDSVKN
ETLKETSDSSHTVPEDLKLQTEACTSTEDSTMSPEAKRARKENPHFPTEQKSSTVLNGCE
DSSSVVDAPVCLQRRTVPLHFSLQELAGKMRRLQDQQKQMNEVKLRYRRFRAKINPGENQ
SAEEELKKEISKEMFKEMEIIGQFNLGFIITKLNSDIFMIDQHATDEKYNFEMLQQHNVL
QGQKLIVPQKLHLTAVSENVLMENIEIFRKNGFEFLVDEDAQVMERVKLVSLPTSKNWTF
GPADIEELIFMLSDSPGVMCRPSRVRQMFASRSCRKSVMIGTALSVSEMKKLVVHMGEIE
HPWNCPHGRPTMRHLVNLDIISQD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttgctctgaacctgctggagcaatcaaggctattgacaaacactcagtg
catcagatctgctctggacaagtggtgctgactttggccaccgctgtcaaagagctggtg
gagaacagcattgatgcaggagccaccaacatcgatgtcaagctgaaggagtgcggagtt
gaacaagtggaagtgtcagacaatggtaaaggtgtcgaggaggacaactttgaaggacta
acactgaagcatcacacatcaaagctacgagatttctcagacctcatccatgtggaaaca
tttggcttcagaggtgaagccctcagctctttatgtgctctgagtgacctcagtgtgctt
acctgccacgagtccagccaggtgggcaccaagctggtgtttgaccacaaaggccaccta
gtgcagcggtcacctcatccccggcagcaaggcaccacgatcagcctgcagcagctcttc
tccaccctacccgttcgacacaaggagttccagcgcaacattaagaaggagtatgccaaa
atgatacatgtcctgcagtcctactgcatcgtctctacaggagtgcgtattacctgctcc
aatcaaaatgggcagggaaagcgcagcactgtcctcagcaccagtggcagccaaaatatg
agagacaacatcggagccatatttggaccaaaacagccacagagtcttctaccttttcaa
caagtatctcctacagaaaatattatagaagaatatggactcaaagaggaagaactaccc
aaacagcttttttccatcacagggtttgtgtctcgaggtgaccacggtgtcgggagaagt
gccacagacaggcagttctttttcattaacaaccggccgtgtgacccccttaaggtgacc
aaacttgtgaatgaagtgtatcatatgtacaacagacatcagtatccatttgttgcgttg
aacatagctgtcgcctcagagtgtgtggatgtgaatgtgacgccagacaaacgacagatt
tttcttcaggaggagaaactcttgctggctattttaaagacctctctcatcactatgtac
gaggctggagtcaataagatcagcctgaactatacaccaatacccagcaccaatgcaacc
tctaaactgtgtcaactcgccctgtctaaaaagaacgaggcagaacctggagaggacatc
cgaacagtgattccaagcccaaagtcctccatgaacctggccggcctaaaagctgccttt
tctaatcattacagctccaattctgggaacaagtcaagtgcggaaaaaggctccaccagc
ggcccaatgcagaaaacgctccagtctttttttaaggattctgtaacaccttctgctgtc
aaccaaagtgtaaaatctcctgtgaaacctacaacagaggcagctaaatgctccccagtg
gggaagtcggtgctagatgggtttaggtatggcagaacgccgtgctgtgatacagactct
gaaaaagacagcgtgactgtgtccagttgtgactctacgatggcagcacctgatattcat
tgttctgatctggagttcagctctcctaaaccgatgattgacagcgacagtgtaaaaaac
gaaacattgaaagaaacatcggacagtagtcacactgttcctgaagacctgaagttgcag
actgaagcgtgcacttctactgaggactctactatgagtccagaggctaagagagccaga
aaagagaatccacatttccccacagagcaaaagtccagcactgttttgaatggttgtgag
gactcttcttcggtggtggacgccccagtctgcctacagaggaggacggtgcctctacac
ttctctttacaagagctggcagggaagatgaggaggttacaggaccagcagaaacagatg
aacgaagtgaagctacgctaccgtcgcttcagggccaagatcaaccccggagaaaaccaa
agtgcagaagaagagctcaagaaagagatcagtaaagaaatgtttaaggaaatggagatc
atcggtcagtttaatctgggcttcattatcaccaaactcaactcggacatcttcatgatc
gaccagcatgccaccgatgagaagtacaactttgagatgctccagcagcacaatgtgctc
caaggacagaaacttattgtcccacagaaacttcacctcaccgcggtcagtgagaacgta
ctcatggagaacattgagattttcaggaagaatggttttgaattcctggttgatgaggac
gctcaggtcatggagagagtgaagctggtgtcgttgcccaccagtaaaaactggacattc
ggcccagcggacattgaagagctgattttcatgttgagtgacagcccaggcgtcatgtgc
cgaccgtccagagtcagacagatgtttgcctccagatcttgtcggaaatctgtgatgatt
ggcaccgctctgagtgtcagtgagatgaagaaactggtggttcacatgggggagattgag
catccgtggaactgtcctcacggcaggccaaccatgagacacctcgtcaacctggacatc
atctcacaagactga
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