Brachyistius frenatus (kelp perch): 138616820
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Entry
138616820 CDS
T10614
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfre01002
]
138616820 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138616820 (usp42)
Enzymes [BR:
bfre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
138616820 (usp42)
Peptidases and inhibitors [BR:
bfre01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
138616820 (usp42)
Ubiquitin system [BR:
bfre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
138616820 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
138616820
NCBI-ProteinID:
XP_069547465
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCNRSSFTSGDVGMDGSCSSSWAVGPTMSSDSPRLKVPGGCLGP
MPGAAVYNNTPSSVERPKEQVISSGDGIDLPQKVLFSPERLILKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKSLEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEYLDLQPFMSQSQGEPQVYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSTDVKKTG
DYNQLSHNPGISGQSSPRPVVIPRINTTVHHNNIGFIGPQLPPHMTKSNLHVNGNGSLRD
YPTNSKPSTSSSVVGKPGHGLASSSISHSISRPTMIPDHDKRQKLSFFIGQSKQNRPSSS
SSSSSSSSSSSSSSSSSSSSYSQPSSASSSSSSSLSCSQSTSDVRFVPRQLNHVNGTSCS
NGDHHTGGNGASFLVPYGQESSEESDQENCGTMDNGCLPKSQPKGNNGTADVFDKSPKTT
NGGSGVHHNGNGLNGQTYGVSKSNQNGHHNGHHKVNGHNTLDSISGSNHGSSSSVASVAT
NGLGTDRGQPNKEVHNPASSLASSSQSIHPAAGESQHVSTPDTRAKTLSEPPPHHPASSA
ASSPPSATATRTHSAAPKESAPSSGHHGNPAALSTQPDCSQSTSGASAAPQNVSIGQDEA
KDLPQTDGPSAGTEGRTDTKEQYQSKPSCRGSERRSSRDRERDRQDSDREKDKHNSGKER
DKQKDRLYSDRERERERHYKDRSQERDSDGDRHRHRRDYRDNYQHRSNRDRGPPPKRYHR
DGESERRREQTVHPSRDRDRVRGSHHYRYSHYQSREDVDHERRAYPHREESHGRPRWQQD
SRESRVMKDKSNGKERDYYPTKESSPARVPETNKPRGSPARDRLSTFESASNREDQNHKR
TSDHRSKERDDSSDARRSKKHKKSKKKKKSKDKDRHRESGSSDVDSDRAAETKKKKKKRR
RHRGSDHEQHSHKYRSSEERESRKRRYSDNKDGKQDNGFSLEKRPRTDARDASGDRLPSS
HHTSPSNASTHRHLNGHTGNGYGQADGNSHRSSSSLKH
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacgagtcagtcgggtgtaaccga
tcctccttcaccagtggagacgtggggatggatggcagttgttccagcagctgggcagtg
ggtcccaccatgtccagtgactctccaaggctgaaggttccaggaggctgcctgggcccg
atgcctggagctgctgtctataacaatacaccctcctctgtggagcggcccaaggagcaa
gtgataagtagtggcgatggaatcgacttgccccagaaggtccttttctccccagagagg
ctcatcctgaagtggacacaggttcaccgcatcggtgccggtctgcaaaacatggggaac
acttgtttcctcaactcagccctgcagtgtctcacctacacccctccgttagccaactac
atgctgacgcgggagcactccaaaacatgccacgagccggggttctgtatgatgtgcacc
atgcaaaaccacatcattcaggtttttgccaactctgggaatgtcattaagcccatcggt
gtgctcaatgagctcaaaaggattgcaaagcacttccgctatggaagccaggaggatgca
catgagttcctgcggtacacagtggatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcaaacgcaggcaaccactttcatccatcaagtatttggcgggtacttaagg
tccagagtgaaatgtttaaactgcaaagctgtctcggatacatttgacccttttctggat
attactctggaaattaagacggctcccagtgtctccaagtctctggagcagtttgtcaag
ccagaacagctggatggtgaaaatgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcgaagagattcacgatccaccgcagctccaatgttctcactctctcactcaaacgg
tttgcaaacttcagcggaggcaaaatcacaaaggatgtaaaatatccagagtacctggac
ctgcagcccttcatgtctcagtcccagggggagccccaggtctacgggctgtacgctgta
ctggttcactctggattcagctgtcatgcgggacactacttctgctatattaaggcaagc
aacggtcagtggtatcagatgaacgactcctctgtgtctgtcagtgacatcaggtctgtt
ctcaaccagcaggcctacgttcttttctacatcaagtccactgatgtgaaaaaaactggg
gactacaaccaattgagccataacccaggcatctctggtcagtcatctccacgaccggtg
gtgataccacgcatcaacaccaccgtccaccacaacaacattggcttcattggtcctcag
ctgccacctcacatgaccaagagcaatctccacgtcaatgggaatggatctctgagggac
tatcccaccaactccaagcccagcaccagcagcagtgtggtgggaaaacccggccatgga
ctggcttcttcctccatctcccactcaatcagccggcccacaatgatcccagaccacgac
aaacggcagaagctttcatttttcatcggacaaagcaaacagaaccgcccgtcgtcctcg
tcctcctcgtcctcctcgtcgtcctcctcgtcgtcctcgtcctcctcgtcctcgtcctct
tacagccagccgtcctctgccagcagctcctcttccagctctttatcctgctcacagtct
acctcagacgttcgctttgttccgcgtcaactcaaccacgttaatggcacgtcttgcagt
aacggggatcaccacactggagggaacggggcgtcatttctggtgccgtacggccaagag
tcctcagaggagtccgaccaggagaactgtggcactatggataacggctgtttacccaag
tctcagcctaaaggaaataacggcacggcagatgtctttgacaaatctcctaaaaccacc
aacggagggtcaggagtgcaccataatggcaatgggttaaatggacaaacatatggcgtc
tcgaaatccaaccaaaatggacaccataatggccatcacaaagtgaatgggcacaacacc
ctggactcgatctctggcagtaatcatgggagttcatcctccgtggcttctgttgctact
aatggattaggcaccgaccgaggtcaacctaacaaagaggtacataatcctgcctcgtcc
ctggccagttcgtctcagagcattcatcctgctgcgggtgaaagccagcacgtctccact
cctgacacaagggctaaaacgctatccgaacccccgcctcatcatccagcatcctccgct
gctagctctccaccttcagccaccgctacaaggacccattctgctgcacctaaagaatct
gcgccttcttctgggcatcatggcaaccctgcggccttatccacacaaccagactgctct
caaagcaccagtggagcatctgcggctccacagaacgtcagcatcggtcaggatgaagcc
aaggatctaccgcagaccgacggtccatcagcagggactgaaggacgtacagacactaag
gagcagtaccagtccaagcccagttgtagaggcagtgaaagaagatcttccagggacagg
gagagagacagacaggactctgacagggagaaagacaaacataactctggcaaggagaga
gacaaacagaaggacaggctgtactctgatagggagagagaaagggagagacactacaag
gacagaagtcaggagcgggacagtgacggcgaccgtcatcggcaccgacgggactacaga
gataactaccaacatcgctccaacagggatcgtgggcctcctcccaaacgttaccacaga
gacggggagtctgagcgtcgccgggagcagactgttcatccatcgagggaccgcgatcgc
gtcaggggctctcaccattaccgctactcccactaccaatccagagaggacgtggaccat
gagcggagggcgtacccccaccgcgaggagtctcacggccgtccgaggtggcagcaggac
agtcgagaatcccgggtgatgaaggacaagagcaacggcaaggagagggactactacccc
acaaaagagtcctcgccggctcgagtgccagaaacaaacaagcccaggggctctccggca
cgggatcgtctgtccacatttgaatcggcttcaaacagggaggatcaaaatcacaagagg
acttctgatcatcggagcaaggagagggacgacagctccgacgcccgtcgctctaagaaa
cacaaaaagagcaaaaaaaagaagaagtcaaaggacaaagacagacaccgtgagagcggg
agctccgacgtggattcagacagagcggcggaaacaaaaaagaaaaaaaagaagaggagg
aggcaccggggcagcgatcacgagcagcacagccacaagtacaggagcagtgaggaacgg
gagagccgcaagcgacgctactctgacaataaggacggtaaacaggacaacggtttctcc
cttgaaaaacggccccgcaccgacgccagggacgccagcggtgaccgtctaccctcgtcc
catcacacctcaccgtcgaacgcttcaactcatcgccatctcaacggacacacaggaaac
ggttacggccaagccgacggcaactcccacagatcgtccagtagcctgaaacactga
DBGET
integrated database retrieval system
