Brachyistius frenatus (kelp perch): 138617285
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Entry
138617285 CDS
T10614
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138617285 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfre01009
]
138617285 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138617285 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
bfre03029
]
138617285 (rb1cc1)
Protein phosphatases and associated proteins [BR:
bfre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138617285 (rb1cc1)
Membrane trafficking [BR:
bfre04131
]
Autophagy
Autophagosome formation proteins
ULK complex
138617285 (rb1cc1)
Mitochondrial biogenesis [BR:
bfre03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
138617285 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
138617285
NCBI-ProteinID:
XP_069548240
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAEKRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFNTAYTNYQH
DLEEIKVKLSKLGTAVSVMARIPLLECLTRHSYRESMEKSSSTPGKDSDETEEEKSTDSV
LCTGEAQKPSKLSASFSASGTATCEPAADQETNEMTDSGGLRAALLDDDTPELTNPPSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKRESFGKLFIFL
LSGKSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPVEVQPFLMV
PTMCDFEPLNHHVETLHQLVQAAQSVDEMSQTITYLLSEQRASYCQSAQRSSLFTPQSES
IHGRRTPLSSKTFSSLSLQGLSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPV
LQQGPLDLDSLAESPESDFMSAVNEFVIEGHLISPNPISDPTSPEMMVESLYSSVINAID
IKRMQDTTILERENSRITVLKQVVEKYQSAAEESHSSLRSVKDDLTHLRGQVLKEQHDFS
FVLCSMSTQVRSIVDNICQAHEMQLKEQHQSELLTLRQDLEKQVQALTDENQVNQNIVRD
VQRAMLELEGLMERKEKELTQLENDKERWVETDSNQTDRIKNLDQINSDQAEEIKTLSAS
RDSLTSQLENLHFEIERGQQKIRQELEGVAQSHLKELEDRMKQEHKAELETLTKENREAL
EHLSAESCAKLSEAADHHVISLREKDNQVKDLEVRITELAELRCKLEVELALKESETEDV
RLLFEEAKMQQTEALKSQVEAETKVLSEELADIKKQLQLKNEEYEVDLAELRSLMRSEKD
HCISELVDRHEEEAILLRNKLSSLQHQAHDAEKNHAEQQQKLKEDLDQQVAALNKDKEQQ
LRSFQELEQELRTVISILQAENDLFSKKVEQDRRSLEKEEAAKAATSDAFKAMDQQKEEL
EKRLLDKIRQLENELQERQSSKSAEGLSLHAEGRTDAGAPLSLDSALQERLQQERASLQT
QMELLEKKKNEELQNLKTSLIAEQQTNFNTVLTREKLKKEHIINELSEQLQQVTQQQDKD
KALIETLSEDRASLMQEKKHLEEELNHMRSTATVSSALFTLNPSAQEVTEAGAAARALPF
AGACSLEPLAETDRLASVAAVREDEHVDSAVEASMVTVHDNLMSEEKQRIILLERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNR
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtacgtgttccaggtcaacaatggcagcacgctgacatttgacacagacctt
gctgtccaaaccgtactggagcttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagaaacgcgtctgc
agctacagtgctggcactgaaaccaaccccatattcttgttcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcgattgagagtgagattcaggtt
aaggtggaggagtctctactgatgccagctgtctttcacactgttgcctcgcgaacacaa
cttgctctggaaatgtttgaagttgccaataaactttgctctttctgtgagcgtttggtt
catgatgaacaccttcaacaccaaggctgggcagctattatggctaatctggacgactgc
actctgtcttatcagaagttgctcgtgaaattcaataccgcttacacaaattatcaacat
gatttggaggaaattaaggtgaaactttcaaagttagggacagccgtttctgtcatggcc
aggatacctctgctggaatgtctgacgagacacagttacagagaaagcatggagaagtcc
agctcaaccccaggaaaggattcagatgagactgaagaagaaaaatccacggactctgtg
ctctgcactggtgaagcacagaagccctccaagttatcagcctccttctctgcgtcgggg
acagccacatgtgagccagctgcagaccaggaaacaaatgaaatgactgacagtggtggc
ctgagagcagcgctattagatgacgacaccccagagctcaccaacccgccctcgttcaat
gttacactattagactggatcaacgtacaagacagacccaatgatgtggaatcggttgtg
aggaaatgctttgactccatcaataggcttgacccacggatcattcaacccttcctggca
gattgtcgcgacacaattgccaagctcgataatcaaaacatgaaagccatcaaagggcta
gaggacaggttgtatgctttagaccaaatgattgcaagctgcaagaagttggtgaatgaa
cagaaagaacttgctcagggatttctggccaatcagaagcgtgctgaaaacctgaaggat
acatctgttctgcctgacttgtgtctgagtcataccaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacattaaaaaaaagtgcaccactgccaaacaagaacttgca
aacaaccttcaagtcagactcaaatggtgctgctatgtgatgcttcatgctgaccaggat
ggagagaagcttcaggctctactcagactactgacagagctaattgagagagtgagggtg
gtcgaggccctcagtaccgtgccccagatgtactgcttggcagttgtggaagtcgtcagg
agaaaaatgtttatgcgccactacagagagtgggcgtatgcgctggtgaaggatggaaaa
cgactgtacgaggcagagaagttcaaaagggaatcctttgggaaactctttatttttctc
ttatcaggaaagtctttcctccgaaatcggttgtttagaggacttgactcatggcctccg
acttcattttgtacacgaaagcccagaaggtttgatgatgaacttccggacatctccctg
gatgacctgcagtacttgaaatcttgttgtcctgtagaggtgcagcctttccttatggtc
cccaccatgtgtgactttgagcccttaaatcatcacgtagagacgcttcaccagctggtc
caagctgcgcagagtgtggatgagatgtctcaaacgattacttacctgctcagtgaacaa
agggcatcttactgtcagagtgcccagagatcatccttgttcactccgcagtctgaaagc
atacatgggagaaggacacctttgtcctcaaagacattttcctctctcagccttcaggga
ctcagctgccagcccctacatgtacctgtaccagctcctctagaagacttatccccagac
agcattgacgcgcaaacgtttgactttgaaaccattggccaccctaacatggatccagtc
ctgcagcagggaccccttgacttggattctctggcagaaagccctgaatctgacttcatg
tcggctgtcaacgagtttgtgattgaagggcacttgatctctccgaaccccatcagtgac
cccactagccctgaaatgatggtggagtcgctgtactcctcagtcattaatgctattgac
atcaagcgaatgcaggataccacaatactagagagggagaactcaaggatcactgttctc
aaacaagttgttgagaagtatcaaagtgctgcagaggagtcccattccagcttaagaagt
gtgaaggatgacctcactcacttaagaggtcaagtattaaaagaacaacatgactttagc
tttgttttgtgcagtatgtctacacaggtgcgcagtattgtggacaacatctgccaggcc
catgagatgcagttaaaggagcagcatcaaagtgagcttctgacccttcggcaagacctt
gagaagcaagttcaggcactaacagatgaaaaccaagtaaaccagaatatcgtcagagat
gtccaacgcgctatgctggagctggaggggcttatggagcgcaaagagaaagaacttact
cagctggagaatgacaaagaaagatgggttgagacagatagtaatcagactgataggatc
aaaaacctggatcagattaacagtgatcaagctgaagagatcaagacactctcagcttca
agagactctttgaccagccagctcgagaatctgcattttgagattgaacgtggtcagcag
aaaatccgacaggagctagaaggtgttgcacagtcccatttaaaggagttggaggacaga
atgaagcaggaacacaaggccgaactggagacattgaccaaggaaaacagggaggcgctg
gaacatctctctgctgaaagttgtgcaaagttaagtgaggcagctgatcatcatgtcatt
tctcttagagagaaggacaaccaagtcaaggacttggaggttcggattactgagctggca
gaactccgctgcaaactagaggtggagttagccctcaaagagtccgagacagaggacgta
aggctcttgtttgaggaggccaagatgcagcagacagaggctttgaagtcccaagttgag
gccgagaccaaagtcctgagcgaagagctggcagatatcaaaaaacagcttcagttaaaa
aatgaggagtatgaagtggacctggctgagctgaggagtctcatgaggagtgagaaggac
cactgcatctcagagctggtagacagacacgaggaggaggctattttactgcgtaacaag
ctctcctctctgcagcaccaagcccatgatgctgagaagaaccatgctgagcagcagcag
aaacttaaagaggacttagatcagcaagtggctgctctaaataaagataaagaacagcag
ctgaggagtttccaagaacttgagcaggagttgaggactgttatcagcattttgcaggca
gaaaatgacctgttctccaaaaaagtagagcaggacagacgttctttagagaaagaagag
gctgccaaggctgcaacatcagatgcctttaaagcgatggaccagcagaaggaggagttg
gagaagagacttctagacaaaattagacaacttgagaatgagcttcaagagagacaatcc
tcaaaaagtgccgaagggttgtcgttgcatgccgaggggcgcacagatgccggagcacct
ctgtctctagactcggcactacaggagcgcctgcagcaggagagggcctccctgcagacc
cagatggagctcttggagaagaagaagaatgaggagctgcagaacctgaagacatcacta
atcgctgagcagcagactaatttcaacaccgttctaacccgagaaaagctgaagaaggag
catatcatcaatgagctctcagagcagttgcaacaagtgacccaacagcaggacaaggac
aaagctctgatagagacactgtctgaggaccgggctagtctgatgcaagaaaagaaacac
ttggaagaagagctcaaccacatgcgcagcactgcaacggtctcctctgctctctttacc
ctgaacccctcagctcaagaggtcacagaggctggagcagcagctcgagctctgcccttt
gctggggcttgttctttggagcccctggctgaaactgacagactggcctctgtggcagcc
gttcgagaagacgaacatgtcgattcagcagtggaggccagcatggtgaccgtccatgat
aatttgatgtcggaggagaaacagcggataatcttacttgagaggactttacacatgaag
gaagaagaaaacaagcgtctcagtcaaagactgatgtctcaaagcatgtcgtctgtgtcg
tcacggcattcagacaaaatcgccatcagagattttcaggttggcgatttggttctaatc
atcctggatgaaaggcatgacaactacgtgctgttcacagtcggtcccactctctacttc
ctccactcagagtctctcactgcactggacctcaaaccagcatcaggaacctcaagacgg
ccgtgggtacttggaaaggtgatggagaaagaatattgccaggcaaaaaaggctcagaac
aggttcaaggttcctctaggaaccaagttctacagagtgaaagctgttccatggaacaga
aaagtataa
DBGET
integrated database retrieval system
