Brachyistius frenatus (kelp perch): 138617414
Help
Entry
138617414 CDS
T10614
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138617414 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138617414
NCBI-ProteinID:
XP_069548513
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MFSTEQSCWFIRKVICWRAAASTAWAVMLLPPTTAVFVLLSRFSLLHPIQSISECLTLLA
SACAIFSFILLCGVILVVGFLNLEYYTVIPTVACSKIALLGQLLHPQQFVNSLVHSVTGI
IVAWFCAVTIGFRYETLGHPCTQSDDFPQMCLNEYHLILLLAGAFVGFSHSLLGVMHNMN
YVSFHTAQQYKYLRFKGSLPLVMKCSATQALYSVRNFIVVYFFLGYVPRAWICKTLNLHL
NSSVHPLDSIAGLLDLSLLYHLWLSATFLLFTWYITLLLFRIFVTEVYSFPVQSPFTDDD
VHSLSKVLTDKQPMILKFLALQDMALLSQHSPSRRCEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLVAYHDTVATNGRAKCLSTGSERKLSSETSATSGTEDLMSPRPAFLMRTPAS
VFARSVVGGPQSPLTAPFTPDLDSPFSSPALRRLTAPVEQCSPWHGTAQSPHIMRRAPKL
WSTATDSQVSGSPPPSPASVPSPKQEPSKPSFLAQFLQNRKDQVKNFLAKRALIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVRASFSEDQFGVVQTMLPSILSCMLVLQEAVDRH
FKLPHASSKPARSTSSMADSTYKTLRFAVRATLKTAIYRITTTFGDHLKAVQVSAEHRKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttttctacagagcaaagttgctggttcatccgcaaggtgatctgctggagagctgca
gccagcactgcttgggctgtcatgttgttgccccccaccacggcagtttttgtcctcctc
agcaggttcagtctcctccaccccatccagtcgatatcggaatgtctcaccctgctggca
agcgcgtgcgccatcttctccttcatactgctgtgcggcgtgatcctcgtggtcggtttc
ctcaacttggagtattacaccgtcattccgaccgtcgcgtgctcgaaaatcgccctgttg
gggcagctgctccacccgcagcagttcgtcaactcgctggtccactccgtcacgggaata
atcgtggcctggttttgcgccgtcaccatcggtttccgatacgagactctgggccacccg
tgcacacagagtgatgatttccctcagatgtgtctgaatgagtatcatctcatcctcctg
ctggcgggagccttcgtcggattctctcacagtctgctgggtgtgatgcacaacatgaac
tatgtctccttccacactgctcagcaatacaaataccttcgcttcaagggatcccttcct
ttggtgatgaagtgcagcgccactcaagctctgtactctgtcaggaacttcattgttgtg
tatttctttttgggatacgttccaagagcatggatctgcaaaacactgaatctccatctg
aacagctccgtccaccctctcgacagcatagccggactgctggacctctctctgctctac
cacctgtggctcagcgccaccttcctcctcttcacttggtacatcacactgctgctcttt
aggatctttgtcactgaggtgtacagttttcctgtgcagtcaccttttaccgacgatgac
gtccacagtctttccaaagtgcttaccgacaagcagccaatgatattaaagtttctagct
ctgcaggacatggctctgttgtctcaacattctccatcacgacgctgcgaagtcttcagt
ctgagtcagccaggaggccaccctcataactggaacgccatcagcaaagagtgcctgtct
ctgctggctgatctgacccagagactcgtagcctaccacgacaccgtagcgaccaacggc
agggccaaatgtctgtccaccgggagcgaaaggaagctttcatctgagacatcagcgacc
tcgggcacggaagacctgatgagcccgcggcccgcttttctgatgaggaccccagcgtcg
gtcttcgcccgctcggtcgtcggaggcccgcagagcccgctgacggctccgttcactccc
gacctggacagccctttttcttctcctgccctgcggcgtctcactgccccggtggaacag
tgctcgccgtggcacggcaccgcgcagagcccgcacatcatgaggagagcaccgaaactc
tggtccaccgccacagattcccaggtcagcgggagtccccctccgtctccagcctcagtt
cccagccccaaacaggaaccctccaaaccaagttttctggctcagttcctccagaacaga
aaagatcaggttaaaaatttcttggcaaagcgggcgctgataatgtatttgtttaacaag
ctcccagaagcctccagtcaggctctctttgctgacagccaggctcacatctgggctttg
gaaggactgtcttacctcgttcgagcctcattctcggaggaccagtttggagttgtacaa
actatgttacccagcattctcagctgcatgctagtcttacaagaggccgtcgatcggcac
ttcaagctgccgcacgcctccagcaagccggccaggtcgaccagcagcatggcggactcc
acttacaaaacactgcgcttcgccgtccgggccacgctgaagacggccatctaccggata
accaccactttcggagaccacttaaaagccgttcaggtgtccgcggagcaccggaaaaga
ctgcagcagtttctggagtacaaggaataa
DBGET
integrated database retrieval system