Brachyistius frenatus (kelp perch): 138617463
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Entry
138617463 CDS
T10614
Symbol
skic2
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138617463 (skic2)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138617463 (skic2)
mRNA degradation factors
3'-5' decay
Ski complex
138617463 (skic2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138617463
NCBI-ProteinID:
XP_069548629
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MLTTSEASTKTTWWQLLAFIYKVGGMDRINVPPVGPLDLPMSLLEMGCSGRFELITRPLP
DQPLAPQSTLPHGLPPTSLTLETEVEKQFLRDPAWLPIHDTDFAFQKFLKVTERKVNIAS
LLNCTPSALHSGLSVVRDPTTGMLLDFTEVLLENTGMSAKNSLSLQRQPGPPSESLRGSN
TNYPFLPGGMEELTLDQIKNKSELETAIDFENDLLRVPPGLKAGMDFTDKDAKLAKPEVN
LMSLLSTLEDIPDLQPEAEEKEEGKGSEEAPKLPRTNSLEDLGIKDAVSSLSPPETGKEE
KSKPKENPVENKKWAIPVNITSPCEDFYKRIPNPAFKWPFELDVFQKQAVLRLEAHDSVF
VAAHTSAGKTVVAEYAIALSQKHMTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQL
SPESSCLIMTTEILRSMLYNGSEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVS
IILLSATVPNALEFSEWIGRIKKKHIYVISTMKRPVPLEHYLYTGNSTKTQKEMFLLVDP
AGNFMTKGYYTAVDAKKERTSKHAQSFGTKNTSHSTTASQDRAVWLTLVHFLSRRQQTPV
VAFTFSRTRCDDNARSLDSMDLTTSIEKAEIHSFFQKSLSRLRGGDRQLPQILVMRDLLK
RGIAVHHSGILPILKEVIEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGF
RNLLPGEYIQMAGRAGRRGLDATGTVIILCKAGVHEMAALHVMMLGKPTTLHSQFRLTYT
MILNLLRVEALRVTDMMRRSFSESHRDTQAQEKRISQLKRALSTLPPLDTEGQLSDLMPY
YHTVTELRNTTEALQRAMLESVNGLKALSVGRVVVVNNKQHLNALGVILQVSNDSVNRTF
TALIICEKGNEEGEGNNNAAFPHLFNTALFIPEGPCSHTVQKLKLQDVSGITVKTLKVIP
DRIIDNYNKRQQPRFRHDPPGQAISTATQELLRLAEASPSGKIATLDPVNDLQLKSMDVV
EGSMRVRVLQDSLKDFNCIHSPTFAEQFARVKERMSVQEELDQLLFLVSDQSLTLLPEYH
QRIKVLQSLQYVDSSGAVQLKGRVACQISSHELLLTELLFENVLSPLAPEESAALLSCLV
FTQNTQVEPHITNTLQEGIKRVLSVAQRIGELQRDCGIPQTAEEFVGQFKFGLTEVVYCW
ARGMPFAEIAQLTDVQEGTVVRCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRD
IVFTASLYTH
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaacttccgaggcgtcaacaaaaactacttggtggcaacttttagctttcatt
tacaaagtggggggcatggacagaatcaatgtgccccctgtgggccccctggacctgccg
atgtccctgctggagatgggatgctctggcagatttgagctcatcacacgtcccctgcca
gaccagcctttagctccgcagagcacgcttcctcatggccttcctcccaccagcctgacc
ttggagacagaagtagagaaacagtttttacgggaccctgcctggcttcctatacacgac
acagactttgccttccagaagtttctcaaggtgactgagaggaaggttaatatcgcctct
ctgctcaactgcactccgtctgcgcttcactctggtctttccgttgtcagagatccaacc
acagggatgcttctggacttcacggaggtgttactggagaacacaggcatgtcagcaaag
aactcgctgtcgttgcagcggcagcctggacctccttcagaaagcctccgaggaagcaac
accaactaccccttcctccccggagggatggaggaactcactctggaccaaattaaaaat
aaatctgagctcgagacggcaatagattttgagaatgatttactgagagtcccgcctgga
cttaaagctgggatggattttactgacaaagatgccaaattagcaaagccggaggtcaac
ctcatgtccctcctgtccacactggaagacatccctgatcttcagcctgaggcagaggag
aaggaggaaggcaaaggaagtgaagaagcccccaaactacccagaacaaacagtctcgaa
gacttgggcatcaaggatgctgtgtcatccttgtctcccccggagacaggaaaagaggag
aaatcaaagccaaaagagaatccggtggaaaacaagaaatgggcaattcctgtcaacata
acatcaccttgtgaagatttttataaacgcatccccaacccagcttttaagtggccgttt
gagctggacgttttccagaaacaggctgtgctgaggctggaggctcacgactctgtgttt
gtagctgcgcacacctccgctggcaaaacagtggtggccgagtacgccatcgctctctca
cagaaacacatgacaaggaccatctacacgtctcctatcaaagctctgtcgaaccagaag
ttcagagactttaaaaacacgtttggagatgttggcctcctgacgggcgacgtgcagctc
agtcccgagtcttcctgtctcatcatgaccacagagatcctcaggtctatgctttacaac
ggctcggaggtcatcagagacttggagtgggtgatcttcgatgaagtccactacattaac
gacgccgagagaggagttgtgtgggaggaggttttgattatgcttcctgatcacgtcagt
atcattctccttagcgccacagtgccaaatgctctggagtttagcgagtggatcggtcgt
attaagaaaaagcacatttatgtgatcagcacgatgaagagaccagtgcctttggagcat
tatctgtacactggaaacagcaccaagactcagaaagagatgttcctgctcgtggaccca
gcaggaaacttcatgactaaagggtattacaccgccgtcgatgccaaaaaggagcgcacc
agcaaacacgcccaatcatttggcacgaaaaacacttctcacagcaccacagccagtcag
gaccgagcagtgtggctcaccctcgtgcacttcctgtctcgacggcagcagacgccggtg
gtcgcgttcaccttttcccggacgcggtgcgacgataacgcccgctcgctggactccatg
gacctgaccacctccatcgagaaggccgagatccactctttcttccagaagagcctgagt
cgcctccgaggaggagaccggcagctgccgcagatcttggtcatgagggacctgttgaag
agaggaatcgcagtccatcacagcgggatcctgccgatcctgaaggaggtcattgagatg
cttttctcgcgaggtctcgtaaaggtgctgtttgccactgagacatttgcgatgggagtg
aacatgcccgccaggaccgtagtgttcgacagcatcaggaaacacgacgggaccggcttc
agaaatctgctgccaggggaatacattcagatggcgggcagagcgggccggagaggcctg
gacgccaccggcaccgtcatcatcctgtgcaaagccggcgttcacgagatggcagctctg
catgtcatgatgctgggtaaacccaccaccctccactcccagttcagactgacctatact
atgatcctcaacctgctgcgagtggaagccctccgagtgaccgacatgatgaggaggagc
ttctctgaaagccacagggacactcaggcccaggagaagaggatcagccagctgaagcgg
gcgttgtccactctgcctccgctggacacggagggccagctgtccgacctgatgccttac
taccacaccgtgacggagctgcgaaacaccacagaagccctccagcgcgctatgctggag
tctgtgaacggactgaaagctctgtcggtgggccgagttgtggtggttaacaacaaacag
catctcaacgccctgggagtcattctgcaggtatccaatgactcggtgaatcgcaccttc
acggctctcattatctgcgagaagggcaacgaggaaggagaaggcaacaacaacgctgct
ttccctcacctcttcaacacggctctcttcatacctgaaggcccttgcagccacacggtt
cagaagctgaagcttcaggacgtctcgggcatcacggtgaaaaccctcaaagtgattcca
gacaggatcatcgataactacaacaagagacagcaaccgcggttcaggcatgaccctccc
ggccaagccatctccacggcaacgcaggagctcctgcgattggccgaagccagccccagc
ggcaagatagcgaccctcgaccccgtgaacgacctgcagctgaagagcatggatgtggtg
gagggctccatgagggtccgtgtgctgcaagacagcctcaaggatttcaactgcatccac
tcgcccacattcgcagagcagtttgctcgtgttaaggagaggatgagtgtgcaggaggag
ctggaccagctgctgttcctggtgtcggaccagtctctgactctgctgcctgaataccac
cagaggatcaaggtccttcagtccctccagtacgtcgacagcagcggggcggtgcagctc
aaaggccgcgtcgcttgtcagatcagcagccacgagctgctgctgaccgagctgctgttc
gagaacgtcctgagcccgctggcgcccgaggagagcgccgccctgctgtcctgtctggtc
ttcacgcagaacacgcaggtggagccgcacattaccaacacgctgcaggagggcatcaag
cgggtgctgtcagtggctcagcgtatcggagagctgcagagggactgtgggataccgcag
acagccgaggagtttgtaggccagttcaagtttggcctgacagaggtggtgtactgctgg
gccagaggcatgcccttcgccgagatcgcccagctgactgacgtccaggagggcacggtg
gtccgctgcatccagcgcctggacgaggtgctgaaggaggtgcgacaggccgcccgcatc
gtgggagactccgtcctgggcagcaagatggagagggcgtccctggcaatccgcagggac
atcgtcttcaccgcctccctctacacccactga
DBGET
integrated database retrieval system
