Brachyistius frenatus (kelp perch): 138617678
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Entry
138617678 CDS
T10614
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138617678 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138617678 (dis3)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
138617678 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Dis3l2_C_term
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
138617678
NCBI-ProteinID:
XP_069548959
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MLKSKTFVKKTRSGGVMKIVREHYLRDDIWCGCECCTDCKQEATVLQKDARIESDLCSYP
HYLIPDTNVVLHQIDVLEDPGICNVIILQTVLQEVRHRSAPVYKRLKDIIHEKEKHFYTF
TNEHHRETFIEREPGETANDRNDRAIRVAAKWYSKHLKTSESDADGLKVVLLTNDQGNKQ
KAAESGLLVYKFEEYIKSLTANPELVDHLALSNDDKAEITSSKVLFPEHIPLSRIQAGIK
SGAFLQGTYRASRDNYLEATVFVQGEGEDSTEVLVQGLQNLNRAVHQDVVALQLLPRNQW
VSPSSVVLQDEGAAKDDNVEEEEEEKNVLMISAAEAARKPTGKVVGIIKRNWRPFCGMLN
VSQIKESTRHLFTPADRRIPRIRIETRQSSTLAGQRIMVAIDGWPKDSRYPNGHFVRSLG
GAGDKDTEQAVLLLEHDVPHQAFSQVVLSFLPKTPWAITPEDMVGREDLRHLTVCSVDPP
GCTDIDDTLHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVP
ELLSSNLCSLRSNVERLAFSCIWEMNHKAEILKTRFTKSVINSKASLTYAEAQMRIDDTN
MDDDITKGLRGLNKLAKILKRKRIEKGALTLSSIEVRFHIDSETHDPIDLQTKELMETNS
MVEEFMLLANISVAQKIYNEFPECAVLRKHPAPPPSNYDILLKAGKSKDVDIHTDSAKAL
ADSLDGAKVDGFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRR
YADIIVHRLLAVAIGADSTYADLMDKHKQSALCNNLNYRHKMSQYAQRASVAFHTQLFFK
TRGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDHKDKVAPSMVFNEEGPTLNVEQHTF
HIFDKVKVTISLDDSNIQHQKIRMSLIDPVITGVSVPAPNTEPQAKKPKLDR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatctaaaacctttgttaagaagacccgatcgggtggggtgatgaaaatagtg
cgcgagcattatctgagagacgatatttggtgtggatgtgaatgttgcacggattgcaag
caggaggctacggtgctgcagaaagacgctcgtattgaaagcgatctctgctcttatcca
cattatctgatccccgacaccaacgtggtgctgcatcagattgacgtgttggaagatcct
gggatttgtaacgtgatcatcctccagactgtactgcaggaagtacggcaccggagcgca
ccagtctacaaacgcctgaaggacatcatacatgagaaagagaaacacttttacaccttt
accaacgaacaccacagagagactttcattgaacgtgaaccgggggagacggccaatgac
cggaacgaccgtgccatccgtgtggcagcaaaatggtacagcaagcacctgaagacatcc
gagtcggacgcagatgggctcaaggtggtcctcctcaccaacgatcaagggaacaaacag
aaagcagcggagagcggcctgctggtgtacaaatttgaggagtacatcaagagtctcaca
gcgaatcctgagcttgtggatcatctggctttgtccaatgatgacaaggccgagatcact
agcagtaaagtgttgtttccagagcacatccctctgtccaggatccaagcgggaattaag
agtggcgccttcctccagggcacctatagggcgagcagggacaactatctggaggccacg
gtctttgtccagggagagggggaagacagcacagaggttctcgtccagggtcttcagaat
ctcaacagagcagtgcaccaggatgtggttgcactgcagctgttgccacggaatcagtgg
gtgtcgccctcctcagtcgtgctgcaggatgaaggcgcagcaaaggacgacaatgttgaa
gaagaagaagaggagaagaatgtgttgatgatatcagcagctgaagcagccagaaagccc
acaggaaaggttgtgggaatcatcaaaagaaactggaggccattctgcggcatgttgaat
gtctcccaaatcaaagagtccacccggcatcttttcaccccagcggaccgccgtatcccg
cgcattcgcattgaaacacgtcagtcgtccactctggcgggccagagaatcatggtggcc
atcgatggctggcccaaagactccagataccctaatggtcactttgtgcgcagcctggga
ggtgcaggggacaaggacacagagcaggcggtgctgctgctggagcacgacgttccacat
caggccttctctcaggtggtgctcagctttcttcccaagacgccgtgggccatcacacca
gaggacatggtggggagagaggacctgaggcatttgacagtgtgcagtgtggatcctccg
ggatgtacagatatagatgacacgctgcactgcagagagctggaaaacggaaaccttgag
gtgggcgtccacatcgccgatgtcagtcacttcatcagacctggcaacgctctggacaaa
gaggccgccaatcgtggcaccactgtgtacctgtgtggcaaaaggatcgacatggttcct
gagctgctcagctcaaatctttgttctctgcgctccaacgtggagaggctggctttctca
tgtatctgggaaatgaaccacaaggctgaaatcctgaaaacacgcttcacaaagagtgtc
attaactccaaggcatccctgacctatgcggaggcccagatgaggattgatgacaccaac
atggatgatgacatcaccaaaggcctgcggggtctcaacaaactcgccaaaatcctcaag
aggaagaggatagagaaaggggcattgacgctgtcgtccatagaagtccgtttccacata
gacagtgaaacccacgaccccattgacctccagactaaagagctcatggagactaactcc
atggtggaggagttcatgttgctcgccaatatctcagtcgcccagaagatttacaatgaa
tttccagaatgtgctgtgctgaggaaacatccggcacctcctccatccaactatgatatc
ctgctcaaggctggaaagtccaaggatgtggacatccacactgattcggcgaaggcgctg
gccgactcccttgatggagccaaagtagacggcttcccgtacttcaacacgctgctgcgc
atcttggccacccgctgcatgatgcaagccgtctacttttgttccggcatggacagcgat
ttccaccactacggtctcgcttcgcccatttatacgcacttcacgtcacctattaggagg
tacgcagatatcatcgtgcaccgcctgctggcagtggccatcggagcagacagcacatac
gccgatttgatggacaaacataagcagtcggccctctgcaacaatctcaactacagacac
aaaatgtctcagtacgcacaaagggcgtccgtggccttccacacacagctgttcttcaag
actcgaggcattctgaacgaagaagggttcgttctgtttgtgaggaagaacgccatcatc
gtactcatcccaaagttcggcctcgagggaacagtcttctttgaccacaaagacaaagtt
gccccaagcatggtttttaatgaagagggtccaactctgaatgtggagcagcacacattc
cacatatttgacaaggtgaaggtcaccatcagcctagatgactccaacattcagcaccag
aagatccgcatgtctctgattgaccctgtgatcactggtgtgagtgtgccagcaccaaac
actgaaccacaggccaagaaaccaaagctggaccgctga
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