Brachyistius frenatus (kelp perch): 138617891
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Entry
138617891 CDS
T10614
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bfre00535
]
138617891 (col14a1a)
Proteoglycans [BR:
bfre00535
]
Extracellular matrix (ECM) proteoglycans
Others
138617891 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4959
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
138617891
NCBI-ProteinID:
XP_069549336
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MLSTGQIRWCSWAPLVLLALSSYYPSKAQSQVPAPRRLRFKVLSSSILLVSWKEPKGDFD
SYLFLYNSIPGGQQREIIASKSDTKVFITDYSPTKHYTVSVIAVSGSEQSRPLQGRYKGE
RGESEGSDKTEPHRLTDSVGPPEDANEITGVDQFVCHTAAIADIVILVDGSWSIGRINFR
LVRMFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNAFSTKDTVIDAVKNLPYKGGNT
LTGLALTYILENCFKPESGSRVGVPKIGILITDGKSQDDVIPPAESLRNAGVELFAIGVK
NADENELRSIASEPDDTHVYNVADFNIMSSIVEGLTRTVCEQVEQQDKDIKHYQIPEKMG
PPLDLVTSDVTARSFRVSWSHAPGHVEKYRVVYYPSQAGEPQEAVVVGSETSVVLQHLSS
LTEYQLAVFAVYVSEASEALRGSETTLALPVVTGLQLFDVTHSTIKARWDSVDRVSGYML
LYAPLTDDEDLDEKEVKVSDAVTELELDGLTPQTEYTVTVYAMYGEEASDPITNQESTLP
LSPPSNLQFSDITHNSAHISWDPAPGEVKGYRIMWVKTGELLTQEMEMGPVSSYDLSELT
SLMEYSVAIFALYDDGQSEPLTDGFTTTPVPGPLDLRSTDVDTDSFKVSWDHSADDIVLY
RLSWAPFTGGDTKEVVFSGSDNRYILTGLSPLTEYEVMLTAIFKDESESDTVSVIETTLA
KTTTIATTTTVVRQAVRNLQLSDETTQSLEASWVLEDPNVDSYRVTYGGLNGEHKEKSVL
VPAAQRRAVLQPLLSDNQYKVTVTPVYNDGQDGISVSAWGSTLPLLPPENLRLSEEWYNR
FRVTWDPPQSPTVGYRIVYQPIYDKGPVLETTVGEDVNSLLLLNLQSGTEYSVQVMASYP
AGQSEPLLVNAKTLFLGVSGLSTYQVRPNSMCVQWQPLLRATLYRVSIQSPLNGQKQEVS
LGGGASRQCFYDLTPSSQYQISINTQIQEMEGPSVSVTDMTLPAPTQAPTERPTTEPPPT
IPPAKEVCKEAKADLVFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAVAQFS
DDARTEFQLSSHGNKEALLEAIQRIRYKGGNTKTGRAIKHVKESIFTLEAGARRGVPKVL
VVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAV
KKIEEQLITFVCEAATATCPSVLMSGNTMAGFHMMEKFGLVEKEYSTIPGVSLEPGSFNS
FPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPEEPFALWEILNKDNEPLVG
LILDNSGKTLTFFNYNYKGDFQTVTFEGTEFKKIFHGSFHKLHVTISKTSVKVVLDCSVV
GEKSTSAAGNITTDGVEILGRMVRSRGRRDSSAPFQLQMFDIICSTSWASRDKCCELPGL
RVEEHCPSMPHACTCSQDSKGPPGPSGPPGGPGTRGARGDRGEPGVTGPQGPNGKIGSSG
PPGPPGPQGPGGLSIQGPPGTAGEKGERGEIGPTGQMGVPGSPSSPGRDGPPGTRGLPGN
NGPQGQQGPPGPIGTPGAPGATGSGGPGGPHGDQGLPGPAGTKGDKGERGDVQSQAAVRA
IARQVCEQLIQSHLSRYNSILNQIPVQSEVSVRTVPGPPGEPGRRGLPGSQGEQGPTGRP
GFPGTNGQNGRPGERGLSGEKGERGSPGVGNQGPRGPPGSPGLPGEGQTGSQGPSGRPGN
PGTAGRPGNPGTTGPAGPPGYCDQNSCMGYNVGVQQDYGNDY
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaactggacagatcaggtggtgttcgtgggctccactggtgttactggccctc
agttcctattaccccagtaaagcacagagtcaagttccagctccgaggaggctgcgtttc
aaagtcctgagctcaagcatactcctcgtttcatggaaggagcctaaaggagactttgac
agctatctgtttctctacaacagtataccaggtggtcagcagagggagatcatagcatca
aaatcggacactaaggtgttcataacagactacagtcccactaaacactacactgtcagt
gtcatcgctgtcagcggcagcgagcagagcagacctcttcagggtagatataaaggtgaa
agaggtgagagtgaaggatcagacaagactgagccccacaggctgactgattcagttgga
cctcctgaggatgccaatgagatcacaggagttgaccagtttgtgtgccacactgcggct
atcgcagacattgtgatcctggtggacggctcctggagtattggtcggatcaacttcagg
ctggtccgtatgttcttggaaaacctggtcaatgccttcgatgttggcatcgataagaca
aggataggcctggctcagtacagcggagatcccaggatagagtggcatctaaatgctttc
tccactaaagataccgtcattgatgccgtcaagaacctgccctacaaaggaggaaacact
ctcacaggtcttgcgttgacatatatcttggagaattgttttaagcctgaatctggctca
cgggtcggtgtacccaagattgggatcctcatcacggacgggaagtcccaggacgatgtc
ataccaccagcagagagcctgagaaatgctggtgttgagctgtttgctattggtgtaaag
aatgccgatgagaatgagttgcgatccatcgcctcagagccagatgacactcatgtctac
aatgtggctgacttcaacatcatgagctctatagtggagggactaacaagaacagtgtgt
gagcaagtggagcagcaagacaaagacatcaagcactaccaaataccagagaaaatggga
ccgccacttgacctggtgacttcagatgtcacagccaggagttttcgggtctcatggagt
cacgccccaggacatgtagagaaatacagagtggtttattatccttctcaggcgggagaa
cctcaggaggctgtagtggtcggcagtgagacctcagtggtgttacagcatctcagctct
ctgactgagtaccagctggctgtgtttgctgtgtacgtgagcgaggcaagtgaagctctg
aggggatccgaaacaaccttggctcttcccgtagtgaccggcctccagctgtttgatgtg
actcacagcaccataaaagcaaggtgggacagcgtggacagagtctcgggctatatgctg
ctgtatgctcctcttaccgatgatgaagacttggatgagaaggaggtcaaggtatcggat
gcagttacagagctggagttagatgggttgactcctcaaactgaatacactgtaactgtt
tatgccatgtatggagaggaggccagtgaccctattacgaaccaggaatctacattacct
ctgagtcctcccagcaacctccagttctctgacatcactcacaactccgcccacatcagc
tgggaccccgcacccggggaagtcaaaggctatcgcatcatgtgggtcaagacaggcgaa
ctactcacacaggagatggagatgggtcctgtgagttcttatgacctcagtgagctgacg
tctctcatggagtactcagtggccatctttgccctgtacgatgacggccaatcagagccc
ctcactgatgggttcaccaccactccagttcctggtcctctggatctacgctccactgat
gtcgacacagacagctttaaggtcagctgggatcactcagccgacgacatcgtcctctac
agactctcctgggcaccgttcacaggtggcgacacaaaggaggtggtcttcagtggaagt
gacaacagatacatcctgaccggtcttagtcccttgactgagtacgaagttatgctgacg
gccatattcaaagatgaatccgagagtgacaccgtctccgtcatagagaccacattggcc
aagacaacaacgattgctaccactactacagtggtgcgtcaggctgtgagaaaccttcaa
ctgagcgacgagaccacccagagcttggaggcttcatgggtgctggaggaccctaacgtg
gatagctacagggtcacctatggcggcctcaacggtgaacacaaggagaagtctgtgtta
gtaccagctgctcagaggagagcagtgctccaacctttactatcagacaatcagtacaaa
gtgacagtcacaccggtgtacaacgatggacaagacggcatcagtgtgtcggcctggggt
tccacgttgcccctcttgcctcctgaaaatcttcggttgtctgaggagtggtacaaccgc
ttcagggtcacctgggatccacctcagtctcctacagtgggttacaggatcgtctaccag
cccatctatgataaaggtcccgttttggagacaacagttggtgaagatgtgaactccttg
ctccttctgaatctgcaaagtgggactgagtacagtgtccaagttatggcttcctaccct
gcaggacaaagtgaaccactgcttgtgaatgccaaaacattgttcctcggtgtctcaggc
ttgtcaacctaccaggtgcgtcccaacagcatgtgtgttcagtggcagcctcttctacgt
gccacattatacagagtctccatacagtctccactcaatggtcagaagcaggaggtgagc
ttgggaggtggagcttcccgacagtgcttctatgacctcacgcccagcagccaataccag
atcagcattaacacgcaaatacaagaaatggagggaccttctgtctccgtcactgacatg
acattgccggcacccacacaggctccgactgaacgacccaccacagagccccctcctacc
atccctcctgctaaagaagtgtgtaaggaggccaaggctgatctggtgttcctggtcgac
ggctcctggtccattggagacgacaacttcatgaagatcacacgttttctctacagcacc
atgggatcactggatctgattggaccagatggcacacaggtggccgtcgctcagttcagt
gatgacgcccggacagaattccagctgagttcccatggcaacaaggaagcgctgctggaa
gctattcagaggatccgctacaagggagggaacaccaagacaggtcgagccatcaaacat
gtgaaagaatctattttcacccttgaggcaggagccaggaggggcgttcctaaagtcctg
gtggttctgaccgacggacgttcgcaagatgatgtcaacaaagtgtcaaaggagatgcag
atggagggttatatcatctttgcaatcggcttcgcggatgcagactatggcgagctggtg
aatattgccagcaaacccagtgatagacacgtcttttttgtggatgatttggatgctgtg
aagaaaatagaagagcagctcattacctttgtctgcgaggctgccactgccacttgtccg
tctgttttgatgagtggtaacacgatggcgggtttccatatgatggagaagtttggcctg
gtggagaaggagtacagcaccatacctggagtttctctggagccgggttcattcaacagc
ttcccctgttaccggttacaccgtgacgccctggtgtcacagcccaccaagtaccttcat
cctgaaggtttgccctccgactacaccatttccatgatgctccgcctacttccggagacc
ccggaggagccctttgcattgtgggaaatcctcaacaaggacaatgagccactggtggga
ctaatcctcgacaactctggaaagacgctgacgttcttcaactacaactacaaaggagac
ttccagactgtcacctttgaaggaacagaatttaaaaaaatcttccatggcagcttccac
aagctccatgtgacaatcagcaagacttcggtgaaggtggtgttagattgttctgtggtt
ggggagaaatccaccagtgcagccgggaacatcaccaccgatggagtggagatcctcggg
aggatggttcggtcaagaggcagacgagacagctctgctccgtttcagctccagatgttt
gacatcatctgcagtacgtcctgggccagcagagataagtgctgtgagctgccaggattg
agagtcgaagagcattgcccttccatgcctcatgcctgtacctgctcccaggacagcaaa
ggacctccaggaccctccggaccccctggcggtccaggcacaaggggagccagaggagac
agaggagagccaggagtgacgggaccacaagggcccaacggcaaaattggctcatctgga
cccccagggccgcctggtcctcaggggcccggcgggctctccattcagggacctccgggt
actgctggggagaagggagagagaggagagatcggtcccactggacaaatgggggttcct
ggaagtcctagctcacctggtagagacggccccccaggaacaaggggtctgccaggtaac
aatggaccacagggacaacaaggaccccccggacccattggcacaccaggagcaccagga
gctacaggatcaggtgggccaggagggccccatggggatcaaggacttcctggtcctgct
ggtaccaaaggcgataagggagaaagaggcgatgtgcagtcccaagctgctgtcagagct
attgcacggcaagtgtgtgaacagctcatccagagccatttgtctcgttataactcaatc
ctgaaccagatcccagtccagtcggaggtgtcagtccgaacagtacctggaccacctgga
gagcctggcaggagaggcctcccaggttctcagggggagcaaggcccaactgggaggcca
ggtttccccggtactaacggtcagaacggccgaccgggtgagagaggtctatcaggagag
aagggagaaagagggagtccaggggttgggaatcagggacctcgaggaccacctggatct
cccggtttgccaggtgaagggcagacaggcagccagggcccatctggtcggcccggcaac
ccggggacagcagggcggccggggaacccaggtaccaccggaccagcaggcccaccagga
tactgtgaccagaactcctgtatgggatacaacgttggagttcaacaggactatgggaat
gattactga
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integrated database retrieval system
