Brachyistius frenatus (kelp perch): 138618121
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Entry
138618121 CDS
T10614
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138618121 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138618121 (cstf3)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138618121 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
138618121
NCBI-ProteinID:
XP_069549743
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSTEGPAEQAAAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERL
VSQFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPS
YKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCV
NPMINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSV
PPQNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEA
AQYLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYE
KVHSIYNKLLAIDDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDSRTRHHVYVTAAL
MEYYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLS
PEKSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCS
ASELKALGYKDVSRAKLAALLPETVVTPSVPAMKDEADRKPEYPKPDTNQMIPFQPRHLA
PPGLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFGTCTLPETVDAAVEL
ITGRQPDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgagggaccagccgagcaggctgctgctgctgctgagtatattcccgagaag
gtgaagaaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcatt
ctgattcgagaagcacagaaccaacccatagataaagcgaggaagacatatgagcgactt
gtctctcagttcccaagttctggcagattctggaaactattcattgaagctgagatcaag
gctaaaaactatgacaaagtagaaaagttgtttcagagatgtctaatgaaagtgttgcac
attgacctgtggaaatgctacctctcatatgttcgagagaccaaagggaagcttccaagc
tacaaagagaagatggcccaggcgtatgacttcgccctggataagattggcatggaaatt
atgtcttatcagatttgggtggactacatcaatttcctcaaaggagttgaggctgtgggc
tcatacgcagagaaccagcgaatcactgctgttcggagggtgtaccagagaggctgtgtg
aaccccatgatcaacatcgaacagctctggagagattatagcaaatacgaggagggaatc
aatgtgcatttggccaaaaagatgattgaagatcgaagtagagactacatgaatgccagg
agggtggctaaggagtatgagacagtgatgaaagggctggacaggaatgcaccctcagta
ccacctcagaactcccctcaggaggcccaacaagtcgaaatgtggaagaagtacatccag
tgggaaaaaagcaacccactgcgcacagaagaccagactctcatcacaaagagagtgatg
tttgcctatgagcagtgcctgctggtgctgggccaccaccctgacgtatggtatgaggca
gcacagtatctggagcagtccagcaaactgttggccgagaaaggggacatgaataactca
aagctgttcagtgacgaggcagctaacatctatgaacgtgccattgggactctcctgaag
aagaacatgcttctgtacttttcatttgctgactatgaagagagtcgcatgaagtacgag
aaagtccacagcatctataacaaactgctggccatcgatgacatcgacccgacgctggtc
tacatccagtacatgaagtttgccaggagggcagagggcatcaaatcaggtcgcactatc
ttcaaaaaggcccgagaggattcacgcacacgtcaccatgtgtacgtgaccgcagcactg
atggagtactactgcagcaaggataaatcggtggcctttaagattttcgagcttggtttg
aagaaatatggggacattccagagtacatacttgcgtacatcgattacctgtctcacctt
aatgaggacaacaacaccagggttctgttcgaacgtgtcctcacctcaggaagcttatca
ccagaaaagtccggcgagatctgggctcggttcctggcctttgagagcaacatcggagac
ctggccagtattctgaaagtagaacgcaggcgctttactgcctttaaggacgaatacgag
ggcaaagaaacggccctgctcgtagatagatacaagttcatggacctgtatccctgctct
gccagtgaactcaaggcccttggatacaaggatgtctctcgtgccaaactggcagcactg
ctcccagagaccgtggtgacgccctccgtgcctgcaatgaaggacgaggctgaccgtaaa
cctgagtaccccaaaccagacaccaatcagatgatcccctttcagccacgtcacctcgcc
cctccaggtctacaccctgtgcctggtggagttttcccagtccccccggctgctgttgtc
ttaatgaagctgctccctccgcctacgtgcttcactggtccctttgtccaagtggatgag
ctcatggaaacttttgggacatgcacacttcctgagactgttgacgctgccgtggagctg
atcaccggcagacagcccgatgccggaggggagggcaacggttccatggagaaccacgct
gttgccaagtcactcaagaggcctaatgcagactcggacgaggaggacgacaaaggagcc
gtggctccgcccatacatgacatctaccgcgcacgccaacagaagaggattcgataa
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integrated database retrieval system
