Brachyistius frenatus (kelp perch): 138618242
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Entry
138618242 CDS
T10614
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138618242 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138618242 (dcp1a)
03036 Chromosome and associated proteins [BR:
bfre03036
]
138618242 (dcp1a)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138618242 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
138618242 (dcp1a)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138618242 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
138618242
NCBI-ProteinID:
XP_069549937
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MESVNAGHMMSLAALQRQDPYINNLLDVTGQVALYNFNSKVNEWEKTEIEGTLFVYARSA
SPHHGFTIMNRLSTENLVEPINKDLEFQLQDPFLLYRNGNLGIYSIWFYDKRDCQRIAQL
MVKIVKLEADHAQRKSPERAEPGRTNGVAEPRPIDILELLSKAKEEYQRAQAGETDVPTE
VNKKAAVNTAEHAHSSTQPEKSSHTVVKQITVEELFGSSLPKDPSLPTMPAQNAAASGDP
SNTYIQKQPYPPPAHQNPLIVSQLSAQDPGSNQRHQAPCLLPAPYALHHGPAFQSVVPRP
DPQPHCSVSPLMVLPAGSEHHAAPPGSAAPPVAPSAYLRQEILGTLKAAVPSLHSDIHKP
ILAPNFLPRQLFTPHRYQEPVGKPLLQHSKEMDVFSQPPNLIKPMSAVPMSPGLAVPGSE
ISVLLSPSAFQQAVNKTAAAAAAAAMASPAPSEPSSASGGAVEPPPVPCSKTLLQETLIH
LIKNDADFLSAIHDAYLQSLSKDFSSMKL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtaaatgctgggcatatgatgagtttagcagctctgcagaggcaggatccg
tacataaacaacttgctcgatgttaccggtcaggtggctctttacaacttcaactccaaa
gtgaacgaatgggagaagaccgaaatcgaaggtaccctgtttgtttatgcgaggtctgcc
tcccctcatcatggcttcaccattatgaatcgactgagtacagagaaccttgtggagccg
atcaataaagacctggagttccagctgcaggatcccttcttgctctacaggaatggaaac
ttgggtatctacagtatttggttctatgacaagagggactgtcaacgcatcgctcagctg
atggtcaagattgtgaaactagaagcggaccatgcccagagaaagtcaccagagagggcg
gagccagggagaaccaatggtgtcgcagagccacggcctatcgacatcttggaactgctc
agcaaagccaaggaggagtaccagagagcccaggcaggtgaaacagatgtgcctacagag
gtgaataagaaagcagcggtgaacactgcagagcatgcccacagctccacacagcctgag
aagagctctcacacggtggtgaagcagatcacggttgaggagctctttggttcgtctctc
ccgaaggacccctctctgcccaccatgcctgcgcagaacgccgctgcttccggtgacccc
tccaacacctacatccagaaacagccatatcctcctccagcccaccaaaacccgctcatc
gtttcccagctttcagcccaagacccaggatccaaccagcggcaccaggccccctgccta
ctcccagctccttatgcgctacaccacggccctgctttccagtcagtggtccccaggcca
gacccccagcctcactgctctgtctcccccctcatggtgcttccagctggctcggagcat
cacgcagctccccctggatccgcagcacctccagtagctccttcggcctatttgagacag
gagatactcggcacgctcaaagcggcggtgccatctttacattcagacatccacaaaccc
atccttgcacccaacttcctgccacgccagctgtttacaccccacagataccaggagccc
gtggggaaaccgctcctccagcacagcaaagagatggatgtcttctctcagcctccaaac
ctgatcaaacccatgtctgctgtccccatgagtccaggtcttgctgttccagggtcggag
atctctgtgctcctctcgcccagtgccttccaacaggccgtcaataagacggcggcagcg
gcagcagcagcagcgatggcctcccctgccccctctgagccctcctctgcctctggagga
gccgtcgagcctccaccagtcccctgcagtaaaacactgctgcaggagactctgatacac
ctcatcaagaatgacgcagacttcctgagtgccatccatgatgcttacctgcagagtcta
tccaaggacttcagcagcatgaagctatag
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integrated database retrieval system
