KEGG   Brachyistius frenatus (kelp perch): 138618506
Entry
138618506         CDS       T10614                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre03420  Nucleotide excision repair
bfre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    138618506 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    138618506 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bfre04121]
    138618506 (cul4b)
   03400 DNA repair and recombination proteins [BR:bfre03400]
    138618506 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bfre04147]
    138618506 (cul4b)
Ubiquitin system [BR:bfre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     138618506 (cul4b)
DNA repair and recombination proteins [BR:bfre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      138618506 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      138618506 (cul4b)
Exosome [BR:bfre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138618506 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 138618506
NCBI-ProteinID: XP_069550359
LinkDB
Position
Unknown
AA seq 874 aa
MFPTGLSSPNPPPPPTQEARPAATDVKNDSGNITSPKKRKINGSEREDTSDTISSSPPKT
LNSSSSSSSSSSSSCCSLTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAAAASCSNN
KSKAAFLAGGVGHHANGLTKTAGSATFSNSKPGAAKKLVIKNFREKPKLPENYTQETWQK
LKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDA
LDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSSLPSIWDMGLELFRFYIISD
LKVQSKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAA
EGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQK
GLTHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKSFGSTIVINPEKDKTMVQEL
LDFKDKVDHIIDVCFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEAT
DEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGA
AFTSKLEGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPP
EMVRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEG
EEFTLEEIKLATGIEDSELRRTLQSLACGKARVLTKLPKSKDVEDGDKFSCNDDFKHKLF
RIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKF
PVKPADLKKRIESLIDRDYMERDKENSNQYNYVA
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
cccgcggctactgatgtcaaaaacgacagcggtaacatcacatctccgaagaagaggaaa
ataaacggctcagagagggaagacactagcgacacgatctcctcttcgcctcccaagacc
ctgaattcctcctcttcttcctcctcctcctcctcctcctcctgctgctctctcactccg
cttcacatccagaagaagttgaggttcgaggattcagtggatttcattggactggatgtg
aaaatggctgaggaggctgctgctgccgccgccgccgccgctgcttcgtgctccaataac
aaaagcaaagccgctttcctggccggcggcgtgggacaccatgcaaacggactgacgaaa
accgcaggctccgccaccttctccaacagtaaacccggtgctgccaagaaactagtcatc
aagaacttcagagaaaagccgaagttgcccgagaactacacacaggagacctggcagaag
ctgaaggaggcggtggaggccatacagaacagcacttcaatcaagtacaatctagaggag
ctctaccaggctgttgaaaatctctgctcccataagatttctgccaagctttacaagcag
ctgagggccgtgtgtgaagaccacatcaaggcacagatcgatcaattcagagaggatgct
ctggacagcgtgcttttcctgaagaaaatcgacaagtgttggcaagatcactgcagacaa
atgatcatgattaggagtatatttttgtttttggaccgcacctacgttttgcaaaattca
tcgctgccatcaatctgggacatgggtctggagctgttcaggttctacatcatcagtgac
ctgaaggtccagagtaaaaccatcgacggcatcctgctgctcattgagagggagcgaaac
ggcgaggcgatcgaccgcagtctgctgaggagcctgctgagcatgctctccgacctgcag
atttatcaagactcctttgagcagcgctttttggaggaaactaatcgactgtacgctgcg
gagggacagaggctgatgcaggagagagaggtaccagaatatctccatcatgtcaacaag
cgcctggaggaggaggcagaccgagtgatcacatatctagaccagagcacacaaaaacct
ctcattgctacagtggagaagcagctgctgggtgaacatctcaccgcaactctgcagaaa
gggctgactcacctgctggatgagaacagaattcaggatctgtctctcctctatcagctc
ttcagtcgagtgcgaggtggtgttcaggtgctcctgcagcactggatagagtacataaag
tcttttggaagcacaatcgtaatcaacccggaaaaagacaaaacgatggtgcaagagttg
ctggacttcaaagataaggtggatcacatcattgacgtgtgtttcatgaagaatgagaaa
tttgtgaatgccatgaaggaggctttcgaaaccttcatcaacaaacggccaaataaaccc
gcagagctcatagcaaaacatgtggattcaaagctaagggcaggaaacaaagaggcaaca
gatgaagaactggagaagatgctggataaaataatgattatctttagattcatctatgga
aaagatgtttttgaggccttttacaaaaaggatctggccaagaggttgctggttggaaaa
agcgcctctgtggatgcggaaaaatcaatgttgtcgaagctgaaacacgaatgtggagca
gcgttcaccagcaaactggagggaatgttcaaagacatggagctttctaaagacatcatg
gtacagttcaaacagtatatgcagtgccaaaacattcccggcaacatcgagctgacagtc
aacatcctcacaatgggctactggccaacctatgtcccgatggaagtgcacctgcctcct
gagatggtgcgactgcaagagatcttcaagactttctacctgggcaaacacagtggcagg
aagctgcagtggcaatcgactttaggccattgtgtcttaaaagctgaatttaaagagggc
aaaaaagagctacaggtgtcacttttccagacactcgtactgctgatgtttaatgaagga
gaggagttcaccctggaggagatcaaactggcaacaggaatagaggacagtgaactgcgg
cggacgctgcagtcgctcgcatgtgggaaagcacgtgtcctcaccaaactcccaaaaagc
aaagatgtggaggacggggacaagttttcctgcaacgatgacttcaaacacaagctcttc
agaatcaaaataaaccagatccagatgaaagaaacggtggaggagcaagccagcaccaca
gagagggtctttcaggatcgtcagtaccagatcgatgctgccatcgtgcggatcatgaag
atgaggaagactctgagccataatctcttgatgtctgaggtttacaaccagctcaagttc
cctgtcaagcctgctgacttgaagaagaggatagagtctcttattgacagggactatatg
gagcgtgacaaggagaactccaaccagtacaactatgtggcttag

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