Brachyistius frenatus (kelp perch): 138618526
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Entry
138618526 CDS
T10614
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138618526 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138618526 (cstf2)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138618526 (cstf2)
U7-dependent histone pre-mRNA processing factors
138618526 (cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
138618526
NCBI-ProteinID:
XP_069550394
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MANVAAAAAAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGDSLAPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTTVQPLIPSGQAGGVQPVNPPPAQPSVPVSQPQ
PVPMHVNGAPQMMQPPSMGVVPGPMPVPGPGPGQGPVGPPGNLQHSPTGSSGQAAIERPQ
GPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIDPNRGYMGAPPPHQAPPVHMSQMASGPPP
DMRGPPMDMRGPPMGEPRNMMGDPRGPPMMEPRGPPMETRGRDPRAMDARGPATGQRVPM
TAGMQAPVPHSMAPNAPPPARPGPGISGVPPSGGGFSPGQSQVSTQDQEKAALIMQVLQL
TPEQIAMLPPEQRQSILILKEQIQKTAGGAP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtagctgctgccgccgcggctgctgcagccgcagctgccgccgcgaataga
gacccagccgtcgaccggtcgctgcgatcggtgtttgtgggaaacattccgtatgaggcc
acagaagaacagctgaaagacatcttttctgaagtcggacttgtcgtgagcttcaggtta
gtgtacgacagggagactggaaagccaaagggatatggcttctgtgaatatcaagaccag
gagacggccctcagtgccatgcggaacctgaatgggagagagttcagtggtcgagctctc
cgtgttgacaatgcagccagtgagaaaaacaaggaagagctgaaaagtttgggaacggga
gccccaattattgagtctccttatggagacagcctcgcaccagaggaggccccagagtcc
atcagcagagctgtggccagtctgccacccgagcagatgtttgaacttatgaaacagatg
aagctgtgtgttcaaaacagtccccaggaggcgaggaacatgctgctgcagaaccctcag
ctggcttatgctctgctgcaggcccaagtggtcatgcggattgttgaccctgagatagcc
ttgaaaatgcttcatcgccaaactacagtccagcctctgattcccagcggacaggctgga
ggagtgcagccagtcaatcctcccccagcgcagcccagcgtgccggtgtctcagccgcaa
cctgtgcctatgcatgtgaatggagcaccacagatgatgcagccccccagcatgggtgtt
gtccctggaccaatgcctgtaccaggacctggacccggacaaggcccagttggacctcca
ggaaaccttcagcattctcccacaggatcgtctggtcaagctgcaatcgagcggcctcaa
ggacccggcggtatccctcccagaggcctgctgggagacggtcccaatgaccccagagga
ggaaccctgctgtccgtcactggagaggtcatagaccccaaccggggctacatgggagct
ccaccaccccaccaagctccacctgtgcacatgtctcaaatggcaagcgggcccccgccg
gatatgagagggcctccgatggacatgagaggcccacccatgggtgaaccacgaaacatg
atgggtgaccccagagggcccccgatgatggagccccggggaccgccgatggaaaccaga
ggtcgtgacccgagggcgatggatgctcgtgggcctgcgacaggtcagagggttcccatg
acagcaggaatgcaggcccctgtccctcacagcatggctccaaacgcccctccacctgca
agaccgggtcctggtatttctggtgtccccccatcaggaggaggcttcagtccgggacag
agtcaggtctccacacaggaccaggaaaaggccgctctgatcatgcaggtcctgcagctg
actccagaacagatcgccatgctgccgccggagcagcggcagagcattctcattctcaaa
gagcagattcagaagaccgctggcggtgcaccctga
DBGET
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