Brachyistius frenatus (kelp perch): 138618649
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Entry
138618649 CDS
T10614
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138618649
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138618649
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138618649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
VPS18_RING_C
zf-RING_UBOX
COX15-CtaA
VPS13_N
Motif
Other DBs
NCBI-GeneID:
138618649
NCBI-ProteinID:
XP_069550630
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MDPPRTRSRSRSGFYHFAVSGGIGSGGNAVGNGSLMNATGGGVSNPGWAPHHGGRSYPES
QQQQQQQQQQQQQQQQQQQQQQQQQHTQGSYLSAGAQRHSSHGAHRHPGAGGLLHFHPDN
VCSEDRDKIEDSPSPKRQRLSQQSILDLSSAPPSTPSSPIRPWELPPSRRPHPHYMPERC
HTPVRNRRSPPMRRQRGRRDRLTRHHHHNAHNNHHHYNSNNNHHHHHHPNAHHHHHHQHL
HSHHGPSPGHQDENYRHPAPPQGYPPYSQQPPRGPGPGPEERPGYHPPNPSPRPLHQSPN
LSPRLLHPAAHPQHPHPSQQQSSVLLDLHEQGSAPVSYPVSPPGAPPGLPPRSAPQQIPA
CSVVFSGQHYPVCSVPPPVLQTCSVQHLPMPYPFPSLLSSDPAFLLPPPHLTHPPTHLSH
HPPHLPQPGQFGPYPAQQARSPLQRIENDVELLGEHLSLGAGLHYPPATHPALTPHSTQL
HFLSHDPLPQEFFGVSYPNFIPRRLPGRRYRSQQLPPSPYHPSLLPYFLSMLPVQPTGPA
ISLELDVDDGEVENYEALLNLAERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVV
CMSDFESRQLLRVLPCSHEFHGKCVDKWLRVSEHSMEPADTHIHACIIHTHTHTHTHTHT
HTRVHIQKYTHTHTYNTHVHF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccgaggactcggtctcggtctcggtctggcttctatcatttcgccgtgagc
ggcggcattggaagcggcggcaacgcggtcggtaacgggagcttgatgaacgccaccgga
ggaggggtgagcaaccccggctgggcgccgcaccacggaggtcgtagctacccggagagc
cagcagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcaacagcagcaa
cagcagcagcagcaacacacccaggggagctacctgtccgcgggggcgcagcgccactct
tcgcacggagctcacaggcaccccggggccggaggtttgctacattttcatccagataat
gtgtgcagcgaagatcgggacaaaatagaagacagtccaagcccgaaaaggcagcgtctc
tcccagcagtccatattagatctaagctccgcccctccctcgactccctcctctcccatt
cgcccttgggagctgcctcccagtcgcagaccacacccccactacatgccggagagatgc
catacacctgtccgaaaccgtcgcagccctccgatgagacgtcagcgtggccgcagagac
cgtctgacccgccaccatcaccacaatgcccacaacaaccaccaccactacaacagcaac
aacaatcaccaccaccatcaccaccccaatgcccaccatcatcaccaccaccagcacctg
cactcccaccacggcccgtcaccgggccatcaggatgaaaactaccgacacccagctcct
cctcagggttacccaccctacagccagcaacctcctcgagggccggggcccggacccgaa
gaacgcccgggttaccatcccccaaacccctccccgaggcctctacaccagtcacctaac
ctgtctcccaggctgctgcaccctgccgcccatccgcagcacccccacccgtcccagcaa
cagagcagcgtgctgctggacctccatgagcagggttcagctccggtatcataccctgtg
tctcctccgggggcgccaccgggcctgccgcctcgctctgccccacagcagatcccagca
tgctcggtggtcttcagtggacagcactatcccgtttgcagcgtccctcctcctgtcctt
cagacttgttctgtgcagcacttacccatgccctacccattcccgtcactgctgtccagc
gacccggccttcctgctcccccctcctcacctcacccacccccccacgcacctctcccac
catccaccccatttgccgcagcccggacagtttggaccctatccggcgcagcaggcccga
tcgccattgcagaggatagagaacgatgtggagctgcttggagagcacctgtctttgggt
gccgggctccactaccctcccgccacccaccctgccctcaccccacactcgacgcagctc
cacttcctctcccatgaccctctgccacaggagttctttggagtgtcctatccgaacttc
attcctcgacgtctcccggggcgacggtaccgctcgcaacagctgcccccttcgccttac
caccccagcctcctgccttacttcctatcaatgctgccagtccagcccaccggtcctgca
atcagtctcgagctggatgtagacgacggagaggtggaaaattatgaggccctcctgaac
ctcgctgagcgcctgggagaggccaaactccgagggctgaccaagggagacatcgaacag
cttccttcctatcgattcaatccaaataaccatcagtctgaacaaacactgtgtgtggta
tgtatgagtgattttgagtcccgccaactgctgcgagttcttccgtgcagtcacgagttc
cacggaaagtgtgtcgacaaatggctgagggtaagcgaacacagcatggagcccgctgac
acacacatacacgcatgtataatacacacacacacacacacacacacacacacacacaca
cacacacgtgtacacatacaaaaatacacacatacacacacatataatacacacgtacat
ttctaa
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