Brachyistius frenatus (kelp perch): 138618903
Help
Entry
138618903 CDS
T10614
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre00310
Lysine degradation
bfre00514
Other types of O-glycan biosynthesis
bfre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138618903 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
138618903 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bfre01003
]
138618903 (colgalt2b)
Enzymes [BR:
bfre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
138618903 (colgalt2b)
Glycosyltransferases [BR:
bfre01003
]
O-Glycan biosynthesis
O-linked Gal type
138618903 (colgalt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
138618903
NCBI-ProteinID:
XP_069551088
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MRAVGAVGVGVVWALLAAVVPGGVSELATLVQEQVKAESTLLKPKVMIAIVARNAAHSLP
HSLGCIERLEYPKERIAIWAATDHNMDNTTAILREWLKIAQRVYHYVEWRPMEEPRSYTD
EWGPKHWPPSRFNHVMKLRQAALKAARERWADFILFVDSDNLLTNPQALNLLMAENLTLV
APMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCYPVPMVHSTFLLDLRRESSR
DLAFYPPHPDYSWAFDDIMVFAFSARQAGVQMYVCNREHYGFLPVPLKAQQSVEDESESF
IHTITEALIDHDIEPSEHVYSPPLLQAKIGFDEIFLINLKRRLDRRTRMLKTMGSLGLHA
TLTDAVDGKALNTSQLQALEIEMMPGYKDPYSGRVLTRGEIGCFLSHHSVWMQVIDRGLQ
RVLVLEDDVRFEPRFKRRLQAIMDDTDKAQLDWDLIYVGRKRMQVQQPEQSVEGVNNLVK
ADYSYWTLGYALSQQGARKLLAAKPFTKMLPVDEFLPVMFNKHPNVQYMSHFEPRDLKAF
SVEPLLIYPTHYTGEPGYVSDTETSTIWDDEAVATDWDRQHARKTAQQGSIRPVAQNSVT
GDSPPPAARASRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgtcggggccgtgggagtcggtgtggtgtgggcgctgctggccgctgtggtg
cccggtggcgtgtcggagctggcgaccctggtgcaggagcaagttaaggccgagtccacc
ctactgaagccaaaggttatgatcgccattgtggctcgtaacgcagcgcatagcctgccg
cactccctgggctgcatcgagaggctggagtacccgaaggagcgcattgcgatctgggca
gcaacagaccacaatatggacaacaccactgccatattgagagaatggctgaagatagcc
cagcgagtctatcactacgtggagtggagaccgatggaggagccgaggtcctacacagat
gagtggggtccaaaacactggcctccttctagattcaaccatgtgatgaagctgagacaa
gcggcactgaaggctgcccgggaacgatgggccgacttcatactgtttgtagacagtgac
aacctgttgacgaaccctcaagcgctgaacctgttgatggccgagaacttgactttggtg
gctcctatgttagagtctcgctctctctactccaacttctggtgtggcatcaccccacag
ggatactataagcgaaccccagactaccagccaatcagggagtggaagcgactcggctgc
taccccgttccaatggtgcacagcactttcctgttggacctgcgtcgtgaatccagcaga
gacctggctttctacccccctcaccctgactacagctgggcatttgatgacatcatggtg
tttgccttctcagcacgtcaagcaggtgtgcagatgtatgtgtgtaatagagaacactat
ggtttcctgcccgttcctctcaaggcccagcaaagcgtggaagatgaaagcgaaagtttc
atacacaccatcacggaggctttgattgaccacgacattgaaccctctgagcacgtgtac
tctccgccattgctgcaggccaagataggctttgatgaaattttcctaatcaacctgaag
cgccgactggacagaagaaccaggatgttgaaaacaatgggctcactcggccttcacgct
acactgacagacgcagtggacggcaaggctctgaatacgtcccagctgcaggcgttggaa
atagagatgatgccgggctacaaggacccgtactctggtcgagtcctgactagaggggag
atcggctgcttcctcagccatcactctgtatggatgcaggtgatagatcgtggcctccag
agggttcttgttttagaggatgacgtcaggtttgagcccaggtttaaacgaaggcttcag
gccataatggacgacacagacaaagcccagctggactgggacctcatctacgtggggcgt
aagcgtatgcaggtgcagcagccggagcagtcagtggagggagtaaacaacctggttaag
gccgactattcctactggacgctcggctacgcgctgtcgcagcaaggagccagaaagcta
ctggctgcaaagccgttcaccaagatgctgcctgtcgacgagttcctgcccgtcatgttc
aacaaacaccccaatgttcagtacatgtctcactttgagccgcgggacctgaaggccttc
tccgtggagccgctgctcatctaccccacccactacaccggagagccgggctacgtcagt
gacacagagacctccaccatttgggacgatgaagctgtggccacagactgggaccggcag
cacgcccgcaagacggcccagcagggaagcatccggcccgtggcacagaacagcgtcact
ggagattcgccgccccctgcggctcgagcgtcacgtgacgaactctga
DBGET
integrated database retrieval system
