Brachyistius frenatus (kelp perch): 138619050
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Entry
138619050 CDS
T10614
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138619050
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
138619050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138619050
NCBI-ProteinID:
XP_069551353
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Position
Unknown
AA seq
889 aa
AA seq
DB search
MESHTKPRAGHRGEAGGVCQRGCGLRLSGPNVNGRGEHRCLEALRTVADALEERSATFEH
GARMARLRWNRRERSLLAQVSTLQNEAQLAALKYQRRLHQYLLHINSIAEQVIGYCKRDL
STAAEMESRVSDEATCAEGEPQETTDALQVNGKELSKSSHEETVEPFRAAKDPVVVQVIR
RTPSGRPHGPPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHT
MDQDYYEGTDYLSPIPADGERTEEFEYEEVELYRLSSQEKLGLTLCYRTDEEEDVAIYVS
EISPNSIAARDGRIREGDRILQINGQDVQDREEAMAALSNEECRNIVLLVARPEMQLEEA
WLDDEHSEFLEQLKMEMLEEQQREEMELAALQEEQENEQRAEDDKPTCSTLPHHKDNVRS
MKERMDSSEHNVLAHIQRRLSQCLRDNRDTHCTSSSSRLEDREDEDDDETEGDRFQQLLE
LKCQIRNSGEYDLFYSHRSTIECSMGEQGGVQHELRMLNEELRSIELECQNIMQAHKLRK
GQQSPSTGRSAPSTKNQSLHCGEPTRGKLADINERLEKSDKDSSSAYNTAESSRSTPLAM
DRSPEHSLQRMVSLTNQRNLCSGLAAGHSLSPSPVPACRAPVPGKSSSPDHSNPSESDQT
PQAEEESTGKLKQCASRIPYFSPSHSSQQRPANIPAHARHYQSYMQLIQQRSAVEYAQSQ
LSLLSVCKEPQRPINEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTT
DDDAMSEMKMGRYWSKEERKQHLVRAKEQRKRREFMQRSRLESLKENPQSSSEGRKEVSI
IELSHKKMMKKRNKKILDNWMTIQELMTHGTKAPEGAKVHNAFLSVTTV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcacaccaaaccgcgcgcgggtcatcgcggtgaagccggtggtgtttgtcag
agaggatgcggtctccggctgtccggtccgaacgtcaacggcagaggggagcaccgctgc
ctggaggcgctccgcaccgtcgccgacgcgctggaggagagaagcgcgactttcgagcac
ggagcccgcatggcgaggctcaggtggaaccggagggagcggtccctgttggcccaggtg
tcaactcttcagaacgaggctcagctcgccgctctcaagtaccagaggagactccaccag
tacctgctgcacatcaacagcatcgcagagcaggtcattggatactgcaagcgtgacctc
agtacagctgccgagatggagagccgggtatcagacgaagcaacgtgtgcggagggagag
ccgcaggaaaccaccgacgcacttcaggtgaatgggaaggagttgtccaagtccagccat
gaggagactgtggagccctttcgcgctgccaaggaccccgtcgtggtgcaggtcatccgg
cggacccccagtggccgcccccacggcccccctcaggaaatccatgtggtggatgtgtgc
actcagaccgacatcacctttgaacacatcatggcgttggcaaagctccggccttcgacc
cctcccgtgcctgacgtctgtcccttcctgctctctgacagttgtcattctcttcataca
atggaccaggattactatgaagggacagactacctctcccccattccagctgatggagag
aggacagaggagtttgagtacgaggaagtggaactgtatcgactcagcagccaagagaaa
ttggggctgactctgtgctacaggacggatgaagaagaggatgtggctatctacgttagc
gagatcagtccaaacagcattgctgcccgagatggacgcattcgagagggggatcgcatt
ttacagattaatggccaagatgtacaagacagagaggaggcgatggctgcactctccaat
gaagagtgtaggaacatcgtactgctggttgccagaccggagatgcagctggaagaggcc
tggctggatgatgagcatagtgagttcctggagcagctgaagatggaaatgttggaggag
cagcagagagaagagatggaattagctgccttacaggaggagcaggaaaacgaacagaga
gctgaagatgacaagcccacatgctccacactccctcatcataaggacaatgtacggagt
atgaaggaaagaatggacagctcggaacataatgtcttggcacacatccagagacgtctg
tcccagtgcctgagagataatcgggacacacactgtacctccagctcctcacggctggag
gacagagaggacgaggacgacgatgagacggagggggatcgtttccagcagcttttggag
ctaaagtgtcagatacgaaacagcggtgagtatgacctgttctacagccaccgcagcacc
atcgagtgcagcatgggggagcagggcggcgtacagcacgagctacgtatgctcaatgag
gagctgcgcagcatcgagcttgaatgtcagaacatcatgcaggctcataagcttcgcaag
ggtcagcaatctccgtcaacgggccgctctgctccctccaccaaaaatcaaagcctccac
tgcggtgagcccacaaggggtaagctggccgacattaacgagaggttggagaaatcggac
aaggacagctccagtgcctataacacggcagaaagttcacggagcacccctctggcaatg
gaccgctccccggagcactcgctccagagaatggtcagtctcaccaaccagaggaacctc
tgcagcggccttgctgctggccactctcttagcccgagccccgtcccagcatgccgtgct
ccagtcccgggaaagagcagcagccccgaccacagcaatccctctgagtcagaccagaca
cctcaggctgaggaggagagcacaggaaagttaaagcaatgtgcttcccgcattccttac
ttttctccttcccacagttcccagcagaggccggccaacatcccagctcatgcccgccac
taccagagctacatgcagctgatccagcagcgctccgccgtggagtacgctcagagccag
ctcagcctgcttagtgtctgcaaagagcctcagcggcccattaatgagcccaagatggag
tggaaggtcaagatccgcagcgacggcacccggtacatcaccaaacggcccgtgagagac
aaaatcctgagggagcgagccctaaagattaaagaagagcgcagtggtggaatgacaaca
gatgatgatgcaatgagtgaaatgaagatggggaggtactggagtaaagaggaaaggaag
cagcaccttgtcagggcaaaagaacagagaaaaagacgggaattcatgcagcggagtcgg
ctggaaagcttgaaggagaaccctcagagcagcagcgagggtcgcaaggaagtcagcatc
atagagctcagccacaagaagatgatgaagaaacgcaacaagaagatcttggataactgg
atgactatccaggagctgatgactcatggcacgaaggcccctgagggagccaaggtgcac
aatgccttcctttcagtcactactgtataa
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