Brachyistius frenatus (kelp perch): 138619362
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Entry
138619362 CDS
T10614
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138619362 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138619362 (u2af2a)
Spliceosome [BR:
bfre03041
]
Complex A
U2 snRNP components
U2 related factors
138619362 (u2af2a)
Complex B
138619362 (u2af2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RRM_occluded
DUF8489
RRM_7
F07F6_N
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
138619362
NCBI-ProteinID:
XP_069551854
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSDFDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGESKERR
HRRSASPLLPRLLPSSSHTPVAENIFIQVRVPPRTAAVIPSSPTSYPQDNAGSRSPHREK
KKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQM
TRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRS
VDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGTQTINGVVSTVVPDSA
HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIA
GLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLNSSVTQMGGLPTEVLCLMN
MVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDS
QKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgaattcgaaagacagctatcagaaaacaaacaagctgaaagggac
aaagagaaccgccaccaccgtcggtcctcctcccgcagccgcagcagagagaggaaaagg
aggagcagagacagggacagacgcagcagggaccgccgtggggaaagtaaggaacggaga
cacaggcgcagtgccagccctctcctcccaagactgttgccatcatcttctcatacgcct
gtcgctgagaacattttcattcaggtgcgagttcctcccagaacagcggctgtgatacca
agctcaccaaccagctacccccaggacaatgctggaagccgttctccccaccgcgagaag
aagaagaaggtgaagaagtactgggatgtccctcctcctggtttcgaacacatcactccc
atgcagtacaaagcaatgcaagctgcagggcagatcccagccacagccctcctgccgacc
atgactccagatggcctggctgttactcccacccctgtacctgtcgtgggcagccagatg
acccggcaggcccgccggctctacgtgggaaacatcccctttgggatcacagaggagtca
atgatggacttcttcaatgcccagatgcgtttgggtggtcttactcaggcccctggaaac
cctgtccttgcagtacagatcaaccaggataagaattttgccttccttgagttccgttca
gtggatgaaacaacacaggcaatggcctttgatggcatcatctttcaaggccagagtctc
aagatccgccgtccccatgattaccagcccttgcccggcatgagcgagaaccccagtgtc
tatgtgcctggtacacagacaattaatggtgtggtgtccacagtggtgccagactcagct
cacaagctcttcattggcggcttgcccaactacctgaatgatgaccaggtgaaggagctg
ttgacgtcatttggccctctgaaggcctttaacctggtgaaggacagcgccacaggccta
tccaaaggatatgccttctgtgaatatgttgacgtcaaccttaatgaccaggctattgct
ggactgaatggcatgcagctgggagacaagaagctcctggtgcaaagagccagcgtggga
tccaagaacgccactctgacaagtataaaccagaccccggtgacgctgcaggttccaggt
ctgaacagctctgtgacccagatgggcggcctgcccactgaggtgctgtgtctgatgaac
atggtggccccagaggagctgctggatgatgaagaatatgaggaaattgtggaggacgtc
agggacgagtgcagcaagtacggccaagttaagagcatcgagatccctcgacctgtcgac
ggcctggaagtcccagggactggcaagatctttgtggagttcatgtcagtttttgactcc
cagaaggccatgcaggggctgacaggcaggaagtttgccaacagggtggtggtgaccaaa
tactgcgatccagacgcctatcaccgccgggacttctggtag
DBGET
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