KEGG   Brachyistius frenatus (kelp perch): 138619698
Entry
138619698         CDS       T10614                                 
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre04140  Autophagy - animal
bfre04142  Lysosome biogenesis
bfre04148  Efferocytosis
bfre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    138619698 (vps41)
   04140 Autophagy - animal
    138619698 (vps41)
   04148 Efferocytosis
    138619698 (vps41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    138619698 (vps41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bfre04131]
    138619698 (vps41)
Membrane trafficking [BR:bfre04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    138619698 (vps41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin WD40_CDC20-Fz zf_RING_Vps8_fungal VPS18_solenoid_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 TPR_7 WD40_Prp19 Vps39_1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_IFT122_1st TPR_19 zf_RING_Vps8 TPR_PEP5_VPS11 Beta-prop_THOC3 TPR_YpiA TPR_17 Beta-prop_WDR3_1st zf-RING_11 CFAP251_N Beta-prop_IFT140_2nd zf-Vps39_C Helicase_PWI MIB_arm TPR_INTS8 zf-rbx1
Other DBs
NCBI-GeneID: 138619698
NCBI-ProteinID: XP_069552455
LinkDB
Position
Unknown
AA seq 854 aa
MAEVEEQGRKPSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQNDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGLH
ETFDCPIKVVALHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSVLHEGEGTITNIQWR
ANLIAWANNVGVKIYDISTKQRITNVLRDNVGLRPDMYPCSLCWKDNTTLIVGWGTSIKI
CVVKERNLTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLFFVKENSDKMDEEFRA
RPRLDIIQTLPESCEEISSDALTVRNFQDNECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMAYINHLVEKGDYDTAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLV
REWPGELYNNMAIVQAVTDHLKRDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELADRPELLHVYLHK
LFKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQM
RGVRVDEENICESCHATILPSDMAKPFSVVVFHCRHMFHKECLPSAGTIPGVQFCNNCSA
KKRGPGSGILEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaagtggaggagcagggaagaaaaccaagtgaggaattcacagatgagtctgag
gaggaggacagcgaggaggagcccaagctgaagtatgagaggctctccaatggggtgaca
gaaatcctccagaacgacgcagccagctgtatgaccgtccatgacaagttccttgccctc
ggtacccattttggaaaggtcttcctgctggacatccaaggaaatgtaactcagaagttt
gaaattagttcagtaaagatcaaccagatcagcctggatgaaagtggagagcatgtgggc
atctgctccgaggacgggaaggtgcaagtgttcggcctctatacgagagaaggcttacat
gagacctttgactgtcccatcaaagtggttgcgttacaccctcagttcaccagatcaaac
tacaaacagtttgtcaccgggggcaacaagctgcttctgtatgagagaaactggttgaat
cgctggaagacttcagttctacacgaaggcgaaggcacgatcactaacatccagtggagg
gctaacctgatcgcctgggccaacaatgtgggagtaaaaatctatgacatcagcaccaaa
cagcggatcaccaacgtgctgagggataatgtcggtctgaggcccgacatgtacccgtgc
agtctgtgttggaaggacaacaccaccctcattgttggctggggcacttccattaagatt
tgtgtcgtgaaagagcgaaatctgactgaaatgagggatctgcccagccgctacgtggaa
atagtgtctgcgtttgagacggagttcttcatcagtggtctggcaccgctggccgatcag
ctggtcacgctgttcttcgtgaaggagaactctgataaaatggacgaggagttccgtgcg
cggccccgtctcgacatcattcagacgctccccgagagctgcgaggaaatctcttcggac
gcgctgactgtgcgtaacttccaggacaacgagtgcagagactaccgcctcgagcattcg
gagggagagtcgctcttctacatcatcagtcccaaagacatcgttgtggccaaagagcga
gaccaggatgaccacatcgattggctgcttgagaagaagaagtacgaggaggcgctgatg
gccgcagagatcagcttcaaaaacattaagagacacgacgttcagaaaattggaatggct
tacatcaaccacttggtggagaagggcgactacgacactgctgcgaggaagtgtcagaag
gttcttgggaaaaacatggagctgtgggagaacgaagtgtacaggttcaagaccattggg
cagctgaaggccatcagtcagtacttgccgagaggagatctgcgtctcagaccggccatc
tatgaaatgatcttgcatgaatttctaaaaactgactatgagggtttcgccacactggtc
cgggaatggcctggagagctttataacaacatggccatcgttcaggccgtcactgatcac
ctgaagagggatcccaccaacagcacgctgctcaccacgctggctgagctgtacacctac
gaccagcggtacgaccgagccttagaaatctacctgagactgaggcacaaagatgtttac
cagctgatccacaaacacaaccttttctcctccatagaggacaagatcgtactcctcatg
gacttcgacaaagagaaagctgttgacatgcttctcgacaatgaagacaagatatcgaca
gacagggtggtggaagaactggcagacaggccggagcttctgcatgtgtatctccacaaa
ctgttcaaacgggaccaccacaaaggccaaaagtaccacgagaggcagatcggcctgtac
gccgaatacgaccgacctaatctcctccctttcctgagagacagcacacactgccctctt
gaaaaggctctagagatttgtcagcagaggaacttcgtcgaggagaccgtcttcctgctc
agcaggatggggaactgccgacgagccctgcagatgatcatggaggagctggaggacgtg
gacaaggccatagagtttgctaaagagcaggacgacgccgagctgtgggaggatctcatc
tcctactccatcgacaagccaccattcatcaccggcctcctcaataatattgggactcac
gttgatcccattctgctcatacaccggattaaggaaggcatggagatcccaaacctcaga
gattccctggtgaaaatcctccaggactacaatctgcagattcttttgagggaaggttgc
aagaagatcctggtggccgactccctctccctcctccagaagatgcatcgaacgcagatg
agaggagtccgggttgatgaggagaacatttgtgagtcctgtcacgctacaatattaccc
tcagacatggccaaacccttcagtgtggtggtgtttcactgcagacacatgtttcacaag
gaatgtttaccatctgcaggaacaattcctggagtgcagttttgtaacaactgcagcgcg
aagaagagagggcccggaagtggaatacttgagatgaagaagtag

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