Brachyistius frenatus (kelp perch): 138619708
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Entry
138619708 CDS
T10614
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138619708 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfre03021
]
138619708 (smarcd3b)
03036 Chromosome and associated proteins [BR:
bfre03036
]
138619708 (smarcd3b)
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138619708 (smarcd3b)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138619708 (smarcd3b)
PBAF complex
138619708 (smarcd3b)
GBAF(ncBAF) complex
138619708 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
TFIIA
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
138619708
NCBI-ProteinID:
XP_069552477
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MAMEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PAPVMEPSRKRPAPSQQVQQQQQQQQQQQQQAVQNRSRKKPVGFPGANEMPARQMDMREP
QSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALK
RPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDP
RLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQ
RLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIAS
LDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRA
AFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgccccggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggcccgccgtacggcgggagcccggcggtgcggcccggcctg
cccgccccggtgatggagcccagccgtaagaggcccgccccctcccagcaggtccagcag
cagcagcagcagcaacagcagcagcagcagcaggccgtccagaaccgctccaggaagaag
ccggtcggattccccggagccaatgagatgccggcgaggcagatggacatgagagagccc
caatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagattctt
ccgcaaaggatccgggagctggtcccggagtctcaggcctacatggacctgctggcgttc
gagcgcaaactggaccagaccatcatgcgcaaacgcgtggacatccaggaggcgctgaag
agaccgatgaagcagcaaaagcgtaaactgaggctttacatctccaacaccttcaacccg
gccagacccgacgccgacgactccgacggcagcatcgcatcgtgggagctgcgagttgag
gggaagctgctggatgatccggggaagcagaagaagaagttctcctccttctttaagagc
ctggtgatcgagctggacaaagacctgtacggtcctgacaaccacctggtcgagtggcac
cgcacgcccaccacccaggagacggacggcttccaggtgaagcggccgggagacgtgagc
gtgcgctgcactctgctgctgatgctggactaccagcctccccagtttaagctggaccct
cgcctggctcgcctgctcggcattcacactcagacgcgctcctgcatcatccaggccctc
tggcagtacgtgaagaccaacaagctgcaggactcccacgacaaggagtacatcaactgt
gacaagtacttccagcagatttttgactgccctcgtctgaagttctccgagatccctcag
cgcctcaccaacctcctcctgccccccgaccccatcgtcatcaaccatgtcatcagcgtg
gaccccaacgaccagaagaagacggcctgctacgacatcgacgtggaggtggaagatccc
ctgaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaatcgcctcg
ctcgacaacaagatccacgagaccatcgagtccatcaaccagctgaagatccagagggac
ttcatgctcagtttctccagagatcccaagggctacatccaggactggctcaagtcccag
agccgagaccttaagttaatgacggacgtggtggggaaccccgaggaggagaggagggcg
gcgttttaccacgagccctggtcccaggaggccgtcagccgctacttctactgcaagatc
cagcagaggagacaggagctggaacaggccttggcggtccgcaacacctaa
DBGET
integrated database retrieval system
