| Entry |
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| Symbol |
topbp1
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| Name |
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
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| KO |
| K10728 | topoisomerase (DNA) II binding protein 1 |
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| Organism |
bfre Brachyistius frenatus (kelp perch)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bfre00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138619745 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:bfre03032]
138619745 (topbp1)
03400 DNA repair and recombination proteins [BR:bfre03400]
138619745 (topbp1)
DNA replication proteins [BR:bfre03032]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
138619745 (topbp1)
DNA repair and recombination proteins [BR:bfre03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
138619745 (topbp1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1512 aa
MSKGDKEVFLVKFVESKEPKTKYAVKAYEAILELQSEKYVKTIEDEDVLQMDQKDKSLFV
FSSFTTPGFLHCKKLGCRVVSPLLVLYCLQQQRCVPKAEKPVFNMAMADVTISCTSLDKA
MRAEMMDLVQLMGGRVYLDLNVSVTHLIAGEVGSKKYLVAARLGKPIMLPSWIKACWEKS
QDSLFRYTDLPLEDYLCPVLRGCTVCVTGLTSTERKEVQRLCEQHGANYTGQLQMNECTH
LIVSEPTGQKYECARKWNVYCVSLHWLFDSIEKGFCQDESRYTVERTASKTTRPHTSTPT
VTGKTADGPSLLGLSHISVNASMTVNDTAVTNSTMSRLETPDTIDISLCPADDLLDGCKL
YLCGLPGKKLEKLRRLVNAAGGLRFNQPSEELTHAIMGELDQDLKNFLFKATHRPHVVTV
QWLLDSFSKGSLLPEEGYLHPDCLPPAPAALSVSALRNNSRPSAGPTVASSSTPRQKRAE
EELLSQYMDDDPTVIEAAAKRTSRTSISTAAEPQPDPWAPSHSRGPEPESTLQEASQAGL
FSGKCFLLVGFGAEAEAQLSELVTDHGGRVLVGRTRVVADYAVVPLLGCSVEATVDEVVT
DTWLAMCAEKECVLRLSSNPLFTPVPVMDGHFPLKDCILSVSQFTGAERESLVELSKHLG
ADVQDYFVRLANQKKGMLASSHLVLQTPEGTKYQAAKKWGLPAVTMHWILESARTGRRAD
EKRFQVDLPPSPERDEGSFVGGSQRPSMPPPARLSPELPLLGLQSGRAVTPLDLGRFQSK
VFRSVLDELKPREETATPKQNQEDGRRNPLQKEPSLQLDTPSRFLSRDQLFRPSFNIKDA
LGALETPGGRLKPGEKVETPLTDFVNRNLKVALANSSRNNVSEMQQVSASPQFTKTTEKV
VPEKEAAPLTGVVICVGKKLSKVQNELNAVAASLGADFRWACDDSVTHYVYQGRVGDNNR
EYRGVKERGLHVVSQHWLHACAEEQRHVAESLYPFTYNPKMSLNLSQVPNSSQRSPPLTR
TQRRDITKDDKSELNSAEEAASLRRVSDGSVDQDETTDAAGRSGISETLEMRENLQRQLQ
EIMSATKMTTGRRTSARLTRMGSGGADSGTHTPDGSRVGRSGNRRTLEALRVSRHAAMDV
NTEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSDPLAPPPPPAAADNRPHFKDSM
TDSELMEMAACDVIDQQMARRFVTPPSEEPEDATLTPNAPSIAFPLANRAAAPEPQEQRE
EEKQPPRFQLSSLSPKERIDYSQLIEELGGVVLDKQCFDPSCSHIIVGTPLRNEKYLAAM
AAGKWILHRRYLEACRAVGLFIQEDEYEWGCSSILEALPSITSQQKRLALAAMRWRKALH
GRSEHEGAFGGWTVMLNIDQSRESGFRRLLQSGGAKVLPSPSPSSYRDTTHLFADFSRLK
PGDFRVDVSEAASQGVTCLKPEYIADYLMQEPIPSIDLYQLTENPSEEASGTPSRKRKVA
AETPKLKKSRLN |
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| NT seq |
4539 nt +upstreamnt +downstreamnt
atgtctaaaggggacaaggaagtcttccttgtgaagtttgtggaaagtaaagaacccaaa
acgaagtatgccgtcaaagcttacgaggccattctggagctgcagtctgaaaagtatgtg
aaaaccatcgaagatgaagatgttttgcagatggaccagaaggacaagtctctgtttgtg
ttcagcagcttcaccactccgggctttctgcactgcaagaagctcggctgcagggtggtg
agtccactgctggtgttgtactgcctgcagcagcagcgttgtgtccccaaagcagagaag
cccgtcttcaacatggccatggccgacgtcactatttcctgcaccagcctggacaaagcc
atgcgggcagagatgatggatctggtgcagctcatgggtggacgggtctacctcgatcta
aatgtgtctgtcacacacctgattgcaggagaggtcggcagcaagaaatacctggtagct
gccagactgggtaaacccatcatgctgccctcctggatcaaagcctgctgggagaaatca
caggacagtcttttcaggtatacagacctgcccctggaggactatctgtgccctgtgctg
cggggctgcactgtttgtgtgacgggcctcaccagcaccgagcgcaaagaggtccagagg
ctctgtgagcagcatggagccaactacaccgggcagctccaaatgaacgagtgcacacac
ctcattgttagtgaaccaacaggtcaaaagtacgagtgcgcccggaagtggaatgtctat
tgcgtgtctctgcactggctgtttgacagcatagagaagggcttctgtcaggatgagagc
aggtacactgtggagcgcacggcgtcgaaaaccacccgacctcacacttctactccgact
gtcaccggcaagacggctgacggtccatctctgttgggcttgagccacatttctgtcaat
gccagcatgacagtaaacgacacggccgttaccaacagcaccatgagccgtctggaaacc
ccagacaccatagacatctccctgtgcccagctgatgatttattggacggctgcaagctg
tatctgtgtggcctgcccgggaagaaactggagaagctgcggcgtctcgtgaacgctgcg
ggaggtctgcgcttcaaccagcccagtgaggaactcacgcatgcaatcatgggcgagctg
gaccaggacctcaagaattttctcttcaaagcaactcacaggccgcacgtcgtcacggtg
cagtggctgctggacagcttctccaaaggcagtctgctcccagaagaaggatacctccac
cccgactgtctgcctcccgctccggctgctctatctgtgtcggcccttcgcaacaactcc
cgtccctcagctggcccgactgttgccagctccagcactcccaggcagaagagagcagag
gaggagctgctgtcacaatacatggatgatgaccccacagtgattgaagcagcagcaaag
aggaccagcaggacgtccatcagtacagctgcggagccgcagcctgatccgtgggcaccg
agccactccagaggaccagaaccagagtcgaccctgcaggaagccagccaggcaggactg
ttttctgggaaatgtttcctcctcgtgggatttggtgctgaagctgaagcgcagctctcc
gagctggtgaccgaccatggaggcagggtgctggtgggccgcacacgggtcgtggcggac
tacgccgtggtcccactgttgggctgctcagtggaggcgacagtggacgaggtggtcact
gatacctggctggccatgtgtgcggagaaggagtgtgttctgcggttgtcctccaaccct
ttgttcacccctgtccctgtgatggacggacatttcccgctcaaagattgcatcctctcg
gtcagccagttcaccggagcagagcgggagtctctggtggagctgtccaagcacctcgga
gccgacgtccaggattactttgtgcgcctggccaaccagaagaaaggcatgctggccagc
tctcacctggtgctgcagacccccgagggcacaaagtaccaggctgccaagaagtggggg
ctccccgccgttaccatgcactggatactggagtctgctcgaactggccgcagggcagac
gagaagagatttcaagtggatctgccaccctcaccagagagggacgaagggagtttcgtc
ggcggttcccagagaccatcaatgcctccgccggctcgcttatctccagagctgcctctg
ctgggtcttcagagcggtagggccgtcacaccgctggatttgggtcgctttcagagcaaa
gtgtttcgctccgtgttggacgagttgaagccccgagaggaaaccgccaccccgaaacaa
aaccaggaagacggcagaagaaacccccttcagaaggagccctccctgcagctcgacacc
ccgtctcgcttcctcagcagagaccagctcttcaggccctccttcaacatcaaggatgca
ctgggggctttggaaactccgggtgggaggttgaagccaggcgagaaggtggaaactccg
ctgactgatttcgtcaacaggaacctgaaggtggctctggccaacagcagccgcaataat
gtctccgagatgcagcaagtgtctgcgagcccccaatttacaaagacaactgagaaagtg
gtgccggagaaagaagctgctcctctgactggtgttgtgatctgcgtgggaaagaaactg
agcaaagtgcagaatgaactaaacgccgtcgccgcctcgctcggagctgacttcaggtgg
gcttgtgacgactcagtgacccactacgtctaccagggccgcgtgggggacaacaaccgg
gagtacagaggggtgaaggagagagggctgcacgtggtctcccagcactggctgcacgcg
tgtgccgaggagcagaggcacgtcgccgagtctctgtatcctttcacctacaaccccaag
atgagcctgaacctgagccaggtgcccaacagctcccagaggtctccgcctctgacacgg
actcagcgcagagacatcacgaaggacgacaagtcggagctgaactccgcagaagaagcc
gcgtctctgcgtcgcgtcagcgacggcagcgtcgaccaagacgagacgaccgacgccgcg
gggaggagcggtatttcggagaccctggaaatgagagagaacctgcagaggcagctgcag
gagatcatgtcggccaccaagatgacgacggggaggcggacctcggcccggctcactcgg
atgggatcgggaggcgccgactcggggacccacacgcccgatggcagccgggttggacgc
agcgggaacagacgaactctggaagctctgagggtttccagacacgcagctatggacgta
aacacggagccgtctcagagtgaacagatagtttgggatgacccgactgccagggaggag
agggccaagctggctgataacctccagtggcccggcagcccgtcgcagcactcggatccc
ctcgcgcctccacctccccccgccgccgccgacaacagacctcacttcaaagactccatg
accgactcggagctgatggagatggccgcctgtgacgtcatcgaccagcagatggcccgg
aggttcgtgacgcctccatcggaggagccagaagacgccaccctcactcccaacgcgccg
agcatcgcctttcctctcgccaaccgcgcagcagcgccggagccgcaggagcagcgagag
gaggagaagcagccgcccagatttcagctgtcctccctcagccctaaggagcgcatcgat
tacagtcaactcatagaggagctcggcggtgtcgtcctggacaagcagtgtttcgacccc
agctgctcccacatcatcgtagggacgccgctgcgtaacgagaagtatctggcagcgatg
gcagccggcaagtggatcctgcaccgccggtacctggaggcctgtcgcgccgtcggcctc
ttcattcaggaggacgagtacgagtggggctgcagctccatcctggaggcgctgccctcc
atcacgtcccaacagaagaggctggcgttggccgcgatgcgctggagaaaagcgctgcac
gggcgctccgaacacgagggagccttcggcggctggacggtcatgctgaacatcgaccag
agcagagaatcgggcttcaggcggttgctgcagtcgggcggggcgaaggtcctgcccagt
ccctccccgtcctcgtacagagacaccacacacctgttcgcggacttcagtcggctcaaa
cctggagacttcagagtggacgtatcggaggccgcctctcagggagtcacgtgcttgaag
ccggagtacatcgcagactacctcatgcaggagccaatcccgtcgatcgatctgtaccag
ctgactgagaatccctctgaggaagcctccggcacaccgtcacgtaaacgtaaagtagca
gcagagacgcccaagcttaaaaagagccgtctgaactga |
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