Brachyistius frenatus (kelp perch): 138620003
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Entry
138620003 CDS
T10614
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03013
Nucleocytoplasmic transport
bfre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138620003 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138620003 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138620003 (nup153)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138620003 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
138620003
NCBI-ProteinID:
XP_069552982
LinkDB
All DBs
Position
Unknown
AA seq
1502 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVKSIVPSWLQKYFKNGDSPGGTE
AVQGTDENCKTPTPRSPNGSEEGSPPLDGRDTPEPSTSNTEPSTSRASLNFQEYVLSRPP
LSRSHLHFTPLDPSSPTLGASSSLFCQPSTSSAPGPFSTGFSLVKEIKDNLSQHEDDNIS
TTSGFSSRASEKDVPTSKTASLPQLWSPETDRTHSGPQPSQSSLKKPAFNLSVFGTSSNS
TLNSTVMNSSQLGDSPFYPGKTVYGGAAAVRSSRSRPGTPYQAPVRRQIKAKPAGVQPCG
VTSATARRILQSLERMSSPLADAKRIPAAASSPLSPSMDGINLHVSHLQAKKKRMEPTLP
PVQKLVVPTATSLSGNRSVTFRPTLTPGGVTRTLDWTTRETPTRQSPQLPEPTPGPSQST
MGSRGPACPLSSTPVASSVSSGGGKMKRERTSTRPSSKRPGDDEVAEMPNLPTISLPIST
SALPTFSFSSPLPPVTTSSTSTPKIPAVTPAKETITNKDPPKAATPPCVPFTFSSPIVKA
TAASPPSFSPSAGFTFSAPVAKLGPSMSNGKLATPIAAAVKPATSKSTEDFDGPFKPAKV
LKQGSVLDLLKAPGFASPVAQISPRPDAAPQQTSTQSISTSTTSSPLPSSIGFGLLKASP
DWTCEVCLVANKPSETKCVCCSAPQPNSSSKSVDSKQSSATSVGLESNSTNNTSTTTTTA
GFGTMFSKPAGTWDCDTCLVLNKPDAVKCVACETAKPGTGLKPSLTLPSAFSAIKTVSAP
AAPIYAGFSGFGDKFKKPEGAWECDTCLVENKAEDTKCVACMSAKPGASAGPSSSAVSAP
VFKKPEGGWDCDVCLLQNKAADVRCVACQAAKPGANVEPKAFGSSFSSSAGGTSGSSTFG
SSTSNSGGFKFGTSDSTSGSESGGFKFGGSESSSSSSSSGGFKFGVPFGNSSSETTSKDT
TASSGFKFGSSSEGFKFGTASSDDKKPDHSAAGSGFKFGVSGGIAFGTGSSSTESNSSKG
GFTFGLSKPEEKTSDSTTTSSSSINFTPAPPSQEKSESEAPSNDTTSANTNSTTTTTTTA
RSVFGRLGEPSLATNTPPARSTFGSLQADKEAAAPTFTFGKPEEKKEAAASSAPSSFLFG
AASKDVDSATAASGGFSFSKPSAPTEQPAAAFTFVKPADKSETSTSEAPKPNFTFGQTAS
DPAAAPKPAFNFMTGNPSNTTNSTTSSSSTPTPSLFGTTSSGTTTSSSSSSSSSSTTAAP
APSAAPSIFMFGQPAATSSDAPPAKAFMFGQSQDGQAPAPSAAPLNSAPAPAPAQPFIFG
APAIAAPPPPPAAAAAPSFGFGAAAPSSASSSASSVVPCPFVTPSFGSSFGSPFTAAPSQ
TPAFGAKPNAAPVFGQQTNSTPVFGAAANSAPGGGFQFGGASSFGATNNASGVFTFGAGS
AASPAPAASPSVAPQPGAPGGGFNFAQPPTFNIGSAKSFTASPAGPQAIAGRKIKTAVRR
RK
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaatcagaagcagaagatatcatatcgcctcgaaacct
tacgccaagagcaaacagcagtcaggcctcatcagtcgagtgacagacacagtaaagagc
atcgttccttcctggctccagaaatactttaagaatggagattctcccggagggacagag
gctgtgcaggggacagacgagaactgcaagacgccaactcctcgttctccgaacggcagc
gaagagggatctcctcctctcgatggacgcgacaccccggagccaagcacgagtaacaca
gagccctcaaccagccgtgcatcgctgaactttcaggagtacgtgctctctcgacctcct
ctgagtcgctcccacctccactttaccccgctggatccctcctccccgaccctgggggcc
tccagcagcctcttctgccagccttccacctcctcagcccctggacctttttccacgggt
ttctccttggtcaaagaaatcaaggataacctctcacagcatgaagatgataacatctcc
accacaagcggattctcctcccgcgcgtctgaaaaggatgttcccacttccaaaacggca
tcgcttcctcagctttggtccccagagacagacagaacccactctgggcctcagccctcc
cagtccagtctgaaaaagcctgctttcaacctgtctgtctttggaacctcctccaattca
acattaaacagcacagtgatgaactccagccagctcggagattcacctttctaccccggg
aagacggtgtacggcggggcggctgcagtcaggagctcccgctcccgtcctggaactccc
taccaggccccggtgaggagacagatcaaggccaagccggctggtgttcagccctgtggg
gtgaccagcgccacagccaggcgcatcctgcagtcactggagcgcatgtcgagcccgctg
gctgatgccaagagaatcccagcagctgcctcatcccccctgtcaccatcaatggatggc
ataaatctacacgtgtcacatcttcaggcaaaaaagaagcggatggagccaactctccca
ccggtgcagaaacttgtggttcctactgcaacatctttgtcaggaaatcgctctgtgacc
ttcaggcctactctgacccctggaggagtgacccgaactctggactggaccacaagagag
accccaacaagacaatcaccgcaactacctgaaccaaccccaggtccctcccaaagcaca
atgggttcgaggggcccagcctgtcccctgtctagcacacctgtagccagcagcgtgagc
tctggagggggaaagatgaagagagagaggaccagtacacgaccctcctcaaaacgcccg
ggagatgatgaggtggccgagatgccgaacctcccaaccatctcacttcccatcagcact
tctgccttgcccaccttcagcttctcttctcccctgccgccagtcaccacttccagtacc
tccacccccaagatacctgctgttactcctgctaaagaaactattacaaataaggatcca
ccaaaggccgccacacccccctgtgtaccttttacattttcctcccctattgtcaaagcc
actgctgctagcccaccttcattttccccttctgctggatttactttcagtgcacctgtg
gcaaaattgggtccctccatgtcaaatggaaagctggccacacccatagctgcagcagtg
aaacctgcaactagcaaaagcacagaagattttgatggacctttcaaaccagccaaggtc
ctgaagcagggcagtgtcctggatcttctcaaggcacctggctttgcttctcccgttgct
cagatttccccgagacccgacgccgctccccagcagacgtccacccaatccatctccacc
tcgacgacgtcctcacccctcccttcttcaatagggtttggtttgctcaaagcctcccca
gactggacgtgtgaagtctgtttggttgcgaacaaaccatctgaaacaaagtgtgtttgc
tgttcggcgccacaacccaactcctcatccaaatccgtggacagtaagcagtcatctgcc
acctctgttgggctggagagcaacagcaccaacaacacctccaccactacaaccacggca
ggttttggcacaatgttctccaaacctgcaggaacctgggactgcgatacgtgtcttgtg
ctcaataaacctgacgcagtaaagtgcgtggcctgtgaaacggccaaacccgggacgggg
ctcaaaccctcactgacacttccttctgccttctcagctattaagactgtatctgcccca
gcagcccccatttatgcagggttcagtggatttggagacaaattcaaaaaacctgagggt
gcatgggaatgtgatacgtgtttggtagagaacaaggcagaggacactaagtgtgtggcc
tgcatgagtgctaaaccaggagcctcagcaggaccctcttcatcagccgtcagtgctcca
gtgttcaagaagcctgagggcggctgggattgtgacgtctgtctcctacagaataaggct
gcggatgtgcggtgtgtcgcctgtcaggcagccaaacctggagctaacgtggagcccaag
gcatttggttcttctttcagttcctcagctggtggaacttcaggttcctctactttcggc
tcttctacctctaattctggaggttttaagtttggcacatcagacagcacttctggatcg
gaatctggaggtttcaagtttggtggctcggagtcgtcctcgtcgtcttcttcatcaggt
ggattcaaatttggagtaccatttggaaactcctcatcagaaaccacttctaaagacact
actgcctcctcagggttcaaattcggcagctcatctgagggctttaaatttgggactgcc
tctagtgatgacaaaaagcctgaccattctgctgcaggttctgggtttaagtttggagtc
agcggtgggatagcatttggaacaggatcatctagcacagaaagtaactcctctaagggg
ggcttcaccttcggactgtcaaaacccgaagagaaaacgtcagacagcaccacgacctca
tcatcctccattaatttcactcctgctcccccctctcaagaaaagagtgaaagtgaggca
ccatcaaatgacaccacatcagcgaacaccaactcaaccaccaccacaactactacagca
aggtctgtatttgggagattgggcgaaccaagtttggcgaccaacacgccaccagcgagg
tctacgtttggatccttacaggcagacaaggaggcagcggctcccacgttcaccttcggg
aagccagaggaaaagaaggaagcggctgcctcctcggctccgtcctccttcctcttcggc
gctgctagtaaggatgtcgattcagcaacggccgcttcaggggggttttccttcagcaag
cccagtgctccaacagagcaacctgcagcggctttcacttttgtcaagccagcagacaag
agcgaaacttctacttcagaggctccaaagcccaacttcacttttggacaaactgcttca
gatcctgctgctgcaccaaaaccagcgtttaattttatgactggtaatcccagcaacacc
accaactccaccacctcatcgtcctccaccccgactcccagtctgtttggcaccaccagc
agcggcaccaccaccagcagcagcagcagcagcagcagcagcagcaccacggcggctccg
gctccctctgctgctcccagcattttcatgttcggtcagcctgccgcaacctccagtgac
gctcctccagctaaagcctttatgtttggccagagtcaggacggtcaggcgcctgcccca
tcagctgcccctctgaactcggctccggccccagcgccagctcagcccttcatctttggt
gctcctgccattgctgctcctcctcctcctcctgctgctgccgctgctccctccttcgga
tttggagcagcagcaccctcctctgcctcttcgtcagcgtcatctgtagttccctgcccg
tttgtgactccttcgttcgggtcatcctttggatcccctttcacagccgcaccctcccag
accccggccttcggggccaaacccaacgcagcccctgtctttggacagcagaccaactcc
acacctgtatttggggcggctgctaattctgcaccaggtggaggctttcagttcggagga
gccagttcgttcggcgccacgaacaacgcctcgggtgtgtttacctttggagcaggatca
gcagcatctcctgcccccgctgccagcccctccgtcgcacctcagccaggagcacctgga
ggtggattcaacttcgcacaaccccccacatttaatattgggtcagctaaatccttcacc
gcctcgccggcgggaccgcaagcaatcgctgggcgcaagatcaagacagcagtgcggcgc
aggaagtag
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integrated database retrieval system
