KEGG   Brachyistius frenatus (kelp perch): 138620089
Entry
138620089         CDS       T10614                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
bfre  Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bfre04121]
    138620089 (rlim)
Enzymes [BR:bfre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     138620089 (rlim)
Ubiquitin system [BR:bfre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    138620089 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 138620089
NCBI-ProteinID: XP_069553134
LinkDB
Position
Unknown
AA seq 645 aa
MEGSNSLEPSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNTTPSTESVEEPVEQPESSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPSEQSTEGQEAVV
AAANAEPQVPMETEVAEEPVVEELAVIVEPEPELEEVVSQEVLGEPPSSPPPPPVQPPLC
PSPRRGQRRARSRSPEPRRTRARLARSRSPLNLDQLDGLPNPRHAHSSQGPSSSTNAPPV
PQVEGSSRTRQHVLSRQSTADGDVQPSRAGAESVPEAPNVGSQEGEAAGGEGGAAGRRPP
TIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRT
YVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSTRGANAPA
DLEALNNPDAAAAEAPAADADEQPVAAGVRGRTVETDMDEGLAAAPPASGGRARPRPPIS
LEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAE
GNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggaagggtcaaacagtttagagccgagtggcagcgaccagccagagtcacaacgcagg
aggcagctggaccgcctggacagggaggaggctttctaccagttcgtcaacaatctcagt
gacgaggactatcgtctcatgagagacaacaatcttctgggcactccgggagaggtaaca
gaagacgagctgttcagtagacttcagcaaatcaaagacggtccagaacagcagaatacg
acccctagtactgaaagtgtagaagaaccagttgaacaaccagagagctctgaggatcct
gccagtggcgatagtctcctggactggctgaacacggtgaggcgcaccggcaacacaacc
agaactggccatcgtggaaaccagtcgtggcgggctgtgagccagaccaacccaaacagt
ggtgattttcgcttcagcctggaaatcagtgtgaaccgcaacctggctgaacagcaggca
gccgctgaaggggagcaggagccttcagagcagtctacagagggtcaagaagcggtggtg
gcggcggcaaatgctgaacctcaggttcctatggagacagaagtggctgaggaaccagtt
gtagaggagttggctgtcatagtagagccagagcctgaactagaagaggttgtttcacaa
gaagtcttaggagaacctcccagctctcctcctccgccgccagttcagccaccgctttgt
ccgtctccacgcagaggtcaaaggcgagcccgcagccgtagtccagaaccacgcaggact
agggcccgtttagccaggagccgctcccctctcaacttggatcagctagatggtctccct
aatccacgacatgctcacagctctcaaggccccagttcttccacgaatgctccccctgtg
cctcaagtggagggcagttctcggactcgacaacacgttctttccaggcaaagcaccgct
gacggtgatgtgcagccatcgagagctggtgcagaatcggtccccgaggcgccaaacgtg
ggatctcaggaaggagaagctgctgggggggaagggggcgcagcagggcgtcgtcccccg
actattatgctcgatctccaggtgcgtcgcgtgcgtccgggtgaatatcggcaaagagac
agcatcgccagtcgtacccgctcgcgctcccagaactcaaacaacacatttctttatgag
agtgagcgtggcggatttcgtaggactttctcccgctctgagcgtgctggtgtgaggacc
tacgtcagcactattcgcatccctatccgaagaatctctgatgcaggtttgggagaggcg
acctcgatggctctccagtctatgatacggcagataatgactggttttggtgagctcggc
tacctcatggattcagactctgattcttcagattcaacccgcggagccaacgcacctgca
gacctggaagccctcaacaatccagatgctgctgctgctgaggctccggctgctgatgct
gatgaacaaccggttgccgctggagtcagaggaaggacagttgaaactgatatggatgag
ggccttgccgcagctccacccgcctctggtggaagggcacgacctagaccacctatcagc
ttagaggaacccagctcactgcccttcctgcggcttgctcacttcttcctcctaaacgat
gacgatgaggaccagccccagggactgaccaaagaacagattgacaacctctccatgcgc
aactttggtgagagtgatgccttgaagacttgcagtgtctgcatcacagagtatgcagaa
gggaacaagctacgcaagcttccctgctctcatgagtaccacgtgcactgcatagatcgt
tggctctccgaaaactccacctgccccatctgccgcagggctgtcctggtatcggccaac
cgagaaagtgtagtgtaa

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