KEGG   Brachyistius frenatus (kelp perch): 138620137
Entry
138620137         CDS       T10614                                 
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre03010  Ribosome
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    138620137 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfre03019]
    138620137 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bfre04147]
    138620137 (rack1)
Messenger RNA biogenesis [BR:bfre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     138620137 (rack1)
Exosome [BR:bfre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138620137 (rack1)
  Exosomal proteins of colorectal cancer cells
   138620137 (rack1)
  Exosomal proteins of bladder cancer cells
   138620137 (rack1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_Gbeta WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EML TRM82_WD WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th DSE1_N Beta-prop_SCAP ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_TEP1_C ASA1 CFAP251_N Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Tricorn_2nd Beta-prop_pof12 Cytochrom_D1 Env-gp36
Other DBs
NCBI-GeneID: 138620137
NCBI-ProteinID: XP_069553208
LinkDB
Position
Unknown
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLK
GHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRQFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDEGHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGFLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDTINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgaccgtgagggggaccctgaaggggcacagtggatgggtcacccag
atcgccacgacgccccagtaccccgacatgattctgtcggcgtcccgagacaagtccatt
atcatgtggaaactgacccgtgatgaaaccaactacggcatcccccagcgctccctgaag
ggccactctcacttcgtgagtgatgtggtcatctcctcggatggacagtttgccctttca
ggcgcctgggacgggacgctccgcctgtgggacctcaccactggcctcaccacgcgccaa
tttgttggacacaccaaggatgttttgagcgtggccttctccgctgataaccgccagatt
gtgtctggctcccgggacaagaccatcaagctgtggaacactctcggagtctgcaagtac
accatccaggatgagggacattctgagtgggtgtcttgcgtacgcttctcccccaacagc
agcaaccccatcattgtctcctgtggctgggacaaaatggtgaaggtgtggaacctggcc
aactgcaaactgaagaccaaccacatcggccacactggcttcctgaatacagtgaccgtc
tctcccgatggctccctgtgtgcatctggtggaaaggatggccaggccatgctgtgggac
ctgaatgagggaaaacacctctacaccctggacagtggtgacaccatcaacgccctttgc
ttcagccccaaccgttactggctctgtgctgccaccggccccagcatcaagatctgggat
ctggagggcaaaatcattgtggatgagctgagacaggaagtgatcagcacaaacagcaag
gctgagcccccacagtgtacctccctggcatggtctgctgatggacagaccctgtttgct
ggctacactgacaacctgatcagagtgtggcaggtcactattggaactcgataa

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