Brachyistius frenatus (kelp perch): 138620146
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Entry
138620146 CDS
T10614
Symbol
pcdh20l
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138620146 (pcdh20l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfre01009
]
138620146 (pcdh20l)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138620146 (pcdh20l)
Protein phosphatases and associated proteins [BR:
bfre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138620146 (pcdh20l)
Cell adhesion molecules [BR:
bfre04515
]
Cadherins
Protocadherins
138620146 (pcdh20l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SecY
Motif
Other DBs
NCBI-GeneID:
138620146
NCBI-ProteinID:
XP_069553220
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MGHGTPDNMNWAGLLQNLLLVVHIRPIICGSVRFSVPEELEPGALIGSLSKHFPPPYQLL
TQEYLWMDKNTGNVYTSEQKMDREALCPKETKAEECIILHNAVVGPSGDLIQFPVIIEDI
NDNAPHFESSEIHLRLSEDVTVGTSFLLDDHAEDRDTGHNGELQYHLKGYKGVFSVKVKE
DKLLITLVVQSALDRETQDLYQMQLVATDRGADPLSATATLIVTVTDVNDNCPSFSSDSP
RRVTIPGDSPKNTVVTQVRATDPDTGPNAAIIYSLSPKVSERAKKLFSLDSLTGYIKLTQ
DLQSDNSEELVLKVLASGHHCPPADTQVTVSVLPKMNQELTIKIGFIAEHQNQTLVLPEN
HPPSVLAVLELEGDSSFKGLCLAIEGEVPFSLSPQNGKYLLSTSKPLDYEMKSEHHIPVV
VQGTSAEGSVVVPSRHVIRLLVADVNDNSPHFLHAHYQLEVEENNQPGMSLLQVSASDAD
SGNNGRVAYRLDKYPSDIFNIDSATGQLSVSAPLDREQQGVHKLTVFARDSGSPPLESMV
TVVIRVLDLNDNAPVFLTPHFIFFIPENVPTFAQVGRIEVKDRDEGENGNIELHVVKSSG
PFVVGNTQGTLRTTTNLDRETQDRYELYLLASDHGHPLALTSTARVTIFVEDINDNQPKV
ILPSSNSSCLTVSPDTLAGTMVTKIYAIDDDSGLNSEITYSVVAPEPVQNSSPFQVDSRS
GNITLSQQLLHKDLGMHHLFIVVRDGGKPAPLYTTVWVNLLVNESVEPCHLDRAPTWTGI
PDLVQTPSKAPICEADTTRSAQVTLLIGLGMMLASTCLLAVTAVLYLKQRRISLQQNKRR
YGEENEIPLRLKDKYYSDE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcctgataatatgaactgggctggattactgcagaatctgctgctt
gtggtccatatcaggccgatcatatgtggatctgtccggttttctgtcccagaggaactg
gagcctggtgctctgattggatcacttagtaaacactttccacctccgtaccagctcctg
acccaggagtatctgtggatggataaaaacaccgggaatgtctacaccagtgagcaaaag
atggatcgcgaggccctctgccccaaggagacaaaagccgaggaatgcattattctacac
aatgctgtcgtggggccctcaggagaccttatacagtttcctgtgatcatagaggacatc
aatgacaatgcaccacattttgaaagtagtgaaatacacctgagactgtctgaggacgtg
actgtggggaccagtttcttgttggatgaccacgctgaggacagggatactggtcataac
ggagagctgcagtaccacctcaaaggctataaaggggttttcagtgtaaaagtcaaagaa
gacaagctgttaatcacgctggttgtacaaagtgctctggatagggagactcaggatctg
tatcagatgcagctggtggccactgatcgtggcgcagaccctttaagtgcaacggcaact
ttgatagtcacagtgacagacgtcaatgacaactgtccgagcttcagctctgacagccct
cgcagggtcaccatcccgggagactccccgaagaacacggtggtcactcaggtcagagcc
acagacccagacacaggcccgaacgctgccatcatttactccctcagtcccaaagtctcc
gagcgggccaagaagctgtttagccttgacagcctcactgggtacatcaagctaacgcaa
gacctccagagtgacaactccgaggagctggtgttgaaagtgttagctagtggccatcat
tgccccccagcagacactcaggtaactgtatccgtgctccccaagatgaaccaagagctg
acgatcaagattgggttcatagcagagcatcaaaaccagactctggtgttaccagagaac
cacccccccagcgtcttagctgttttagagctcgagggtgacagcagctttaaaggctta
tgtcttgccattgaaggtgaagtgcctttctctttgagcccgcagaatggcaagtatctg
ctttccacatcaaagcccttagactacgagatgaaaagtgaacatcatattcctgtggta
gtgcaagggacatcagctgaaggatctgtggtcgtcccttccaggcatgtgataaggctg
ctggtggcagatgtcaatgataactcgccacatttcctccatgctcactaccagctggag
gtggaggaaaacaaccagccaggaatgtccctgctacaagtctcagcttcagacgcagac
agtggaaacaatggcagggtggcctacaggctggataaatacccgtctgacatctttaac
attgactctgcgacaggacaactgtctgtgtcagctcctctggatagggaacagcagggt
gtacacaaactcactgtgtttgcacgagatagtggctctcctccgttggagtccatggtc
acagtggtcattcgtgttctggacttgaatgacaatgcgcctgtttttctaacccctcac
ttcatctttttcatccctgagaatgtaccaacattcgcccaagtagggaggatagaggtg
aaagacagagatgaaggggagaacgggaacatagaattgcatgttgtaaaaagcagtgga
ccttttgttgtgggtaacacccaggggacactgcgcaccaccaccaacttggaccgcgag
acacaggaccgctatgaactctacctgttggccagcgatcatgggcacccgctcgctttg
acttccactgccagagtgactatctttgtggaggacatcaatgacaaccagccaaaagtg
atccttcccagcagcaactcctcctgcctcactgtctctcccgacaccctagcaggcact
atggtaacaaagatctatgccatcgacgatgactcgggtcttaattcagagattacatac
tctgttgtagcgccagagccagtgcaaaacagcagccccttccaggtagattcaaggtca
gggaacatcaccttaagtcagcagcttctacacaaagacctgggaatgcatcacctgttc
attgtggtcagagatggagggaaaccagctccactttacaccactgtctgggttaatctg
ttggtcaacgagagcgtggagccgtgccacttggacagggcacccacctggacaggaata
cctgacttggttcaaaccccttcaaaggcccccatctgtgaggccgacactaccagatct
gcacaagtgacattgttaatcggcctgggtatgatgctggcctccacatgtttgctggca
gtgacagctgttttatacctgaagcagaggagaataagtctacaacagaacaagaggcga
tacggcgaggagaatgagattccactcaggctcaaagacaaatattactccgatgaataa
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