Brachyistius frenatus (kelp perch): 138620318
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Entry
138620318 CDS
T10614
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138620318 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfre01009
]
138620318 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138620318 (pcdh7a)
Protein phosphatases and associated proteins [BR:
bfre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138620318 (pcdh7a)
Cell adhesion molecules [BR:
bfre04515
]
Cadherins
Protocadherins
138620318 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
138620318
NCBI-ProteinID:
XP_069553527
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MQRLGAVHSSAAQALSLVVLVLQLLTQLPGADSALRYRVAEEGPPDVKIGNVAADLGLTA
GTGSGDVTFALESGSEFFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGGAGSSSTRRTAGGNPITRVEGLGDRRGRSGDNGGGARSSVFELQVADIPDG
EKQPQLIVKGTLDREQKDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYE
AEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRID
REEVAQLRFTVTARDRGVPPRTDRTTVVLAVRDENDNVPVVEIRKIGRIPVRDGVALVPE
NVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKKY
FLHTSALLDYEVTKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPTFAQSVVEVHFA
ENNSPGERVVTVVATDADSGKNAEIAYSLDPAANGPFYIDADNGDIRATGVLDREQRERY
ELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTD
ADEGENAELSLFVEMDGADEKTGEKTEAEEGEKEQQEVFSIENNTGTIFSSASFDREKLS
TYTFRVRAVDGGEPRKTATATVSLFVTDENDNAPSITSPANETYTLLPPASSARTIVRTV
TAVDSDTGPNADLRYALVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLVVRVNDSGI
PSLCATALVHVFINESLANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIGV
LAGAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPSGAQPQAGRGGGSDRGRK
PRRDKRNGSGGSAAGGGGKSDRSLYSGIVTVNGLRRHANDDDEEDLSSASERLAARYCAV
DGDPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQELPPSNTF
VGSGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYSKQGTLRRVTFSVVSQ
PQDGGCYDSGLEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQLP
DVALTGKCTRECDEFGHSDTCWMPLRRSPRQRQRHGSDPPRLSTFAPGDDNNNLRGNDHE
SDSESAGSAGSSEPGVVVSGEGQRLPLANGDPLGTLGRGDRNRNMGDHNRNLLNRKMTSA
SYDTFSSAGFGRRQQEEEGGEAQNPPEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggtgcagtgcactcctccgcggcgcaggctctcagcctcgtggtctta
gtgctgcagctgctgactcagctaccgggtgccgactcagctctccggtaccgggtggcg
gaggagggcccacctgacgtcaagattggcaacgtagccgccgatctgggcctcacagct
ggtaccggcagtggggatgtcactttcgccctggagagcggctcagagttcttcaagatt
gacaatgtgacaggtgagctgactacaggcccacggcgcatcgacagagagaagctccca
cagtgccagatgatatttgatgaaaatgagtgcttcttggattttgaggtgtcagtgatt
gggccactgcaaagctgggtagacctgttcgaaggccgcgttgtcataacagacatcaat
gacaacacaccatccttcccctcacctgttctccagctctcagttgaggagaatcgccca
ataggaaccctttacctgctgccaacagccacagacagggattttgggcgaaatggcatt
gaccgctatgaactcatccaagatggtggggctgggtcaagttcaacaagacgcacagca
ggaggaaaccccattactagagtggaggggctgggggaccggaggggtagaagtggagat
aatggaggaggagccaggagtagtgtgtttgaactgcaagtggcagatataccagacggt
gaaaaacaaccacagctcattgtgaaaggcacattggatcgtgagcaaaaagactcatat
gagctcgtcctcagggttcgagatggagggaacccaccacgttcctcccaagctctgctt
cgtgtttccatcactgatgtgaacgacaacagtccacagtttgagaggtcgacatatgag
gcagaaatggcagaaaacgctcctccaggtacgcctgtcctccaggtcagagcctcagac
cgtgacattggtgtcaacgggcaggtggagtatgtcttcggagctgccactgaatctgtc
aggcgactcctgcggctggatgaagccactggatggctgagcgttctccacaggattgat
cgagaagaagtggcacaactgaggttcacagtaacagccagagaccggggtgtgcctccc
cgcactgaccgaaccacagtggttctggctgtccgcgatgaaaatgacaacgtcccagtc
gtagagatccgaaagatcggacggatccctgttcgagatggagtagccttggtaccagaa
aacgttctggtggacacaccagtggctctggttcaggtgtcagaccgagaccagggagag
aacggggctgtgacttgtacagtcgtaggagatgtcccattcacactgaagccagccggt
gaaacagctctcccacccctacctgcagatgaagcctttgacaggaacaagaaaaaatac
ttcctacatacttcagccttgctggactacgaggtcacaaaagagtacagcgtaacaatc
gtggcagtagattctggcagccccagcctgtccagcaacagctcactgatggttcgagtg
gtagatatcaatgaccatgccccaacctttgcccagagtgttgtggaggtccacttcgct
gagaacaactcacccggagaaagggtagttactgttgtagctacagacgcagacagtggc
aagaatgcggaaattgcctactccctggaccctgctgctaatgggccattttacatagac
gcagacaatggagatatccgtgccactggggttctggaccgtgagcagcgagagcgatat
gaactacgggtgattgcaaaggacaaaggcaccccctccctgcaaggctctgcaactgtt
gttgtgcaggtgaccgaccgcaatgacaacgcgccaaagtttgttcaggaaatcttcacc
ttctacgtcaaggagaacctgctcgccaacagtccagttggcatggtcaccgtgacggac
gctgacgaaggtgagaacgcagaacttagtctgtttgtggagatggatggagctgatgag
aagacaggagagaagacggaggcagaagaaggtgagaaagagcaacaagaggtgttctcc
attgagaacaacactggaactatcttctcctctgcatccttcgaccgtgaaaagctgtcc
acctacaccttccgtgtccgggcggtggatggaggagagccccgcaaaactgccaccgcc
accgtctcactttttgtgacggatgaaaatgacaacgccccctcaatcacctctccagcc
aacgagacctacaccctcctaccacctgccagcagtgcccgcaccattgtcaggactgta
acagccgtggactcagacacgggtccgaatgccgaccttcgctacgctctagtgggggga
aatcccttcagactgtttgagattggccacaccaacggagtgatcaccctggcagagcct
ctggagcggcgccacagaggtctacatcgcctggtggtccgagtcaatgacagtggcatc
ccctctctgtgtgccactgcactggttcatgtcttcatcaacgagagcttggctaacgca
acactagtggatgcacaggtggcccgaagcctgatggctccactgtctctggacattgca
ggggacccagacagtgaacgtgcattagggaagcagcgcctcagtgttgccattggtgtc
ttggcaggagccgcagcggtcatcctggttattcttcttgtagttacagctcggcagtgt
ggcgctcagggcaagaatggctatgaggccggtaagaaggagccagaggaggacttcttc
agtccttcgggggctcaaccacaggctggccgtggtgggggatcggaccgtggacgcaaa
cctcgacgcgacaaacgcaatggaagtggtggcagtgcagctggaggaggagggaagtca
gacagatcgctctacagcggtattgtcacagttaacgggctgcgtcgccatgccaatgac
gacgacgaggaggatttgagcagtgccagcgagcgcctggcagcccgttactgtgctgtg
gacggtgaccctggcagcccacggatgggcggcggccggagacaccagtcaagcccagat
cttgccaggcactacaaatcgagctcacctctacctgcagtgaatctacagccccactcc
cctccagcagagggaaagaagcatcaggcagtccaggagctgcctccctccaacaccttt
gtgggcagtggtggatgtgtgggaagtgccggctccagcagcagcagtagtgggggaagt
ggcaatgcagatgccatgtccctgggatctgaccagtgctcagagtatggctgccagact
gggaacaagtacagcaaacaggggacccttcgtcgggtgaccttctctgtagtgagccaa
ccccaggacggcggttgctatgacagcggcctggaggactcggagacaccaagcagcaag
agttcgtcggggccgcgcctgggagccctgccgcttcccgaggaaggctacgagcgaacc
acaccggagggcagcgtgggggaagaggagcacgtggagaatgatgccagacagctgcca
gatgtagctctgacaggaaagtgtaccagggagtgtgatgagtttggccactctgacact
tgttggatgccgctccgccgttcgccgcggcagcgtcagcgccatggcagcgacccccca
cgactctcgaccttcgccccgggagatgacaacaataatctccgtggtaacgaccacgag
agtgacagcgagagcgccggcagcgctgggagctcagagcccggagtagtcgtcagtgga
gaaggtcagaggttacctttagccaatggggatcctctcggcaccctgggaagaggagac
cgcaacagaaacatgggcgatcacaaccgtaaccttctaaaccgcaagatgacttcagca
tcctacgacacattcagcagtgcaggcttcggtaggcgccaacaagaggaggaaggagga
gaagcccagaacccaccggaggtcataccactgacgcggacaggaggggactacaagacc
acctcctgcctcacgttgtcgcgccgtgaggtctacctgtga
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