Brachyistius frenatus (kelp perch): 138620416
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Entry
138620416 CDS
T10614
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138620416 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfre04147
]
138620416 (copb1)
Membrane trafficking [BR:
bfre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
138620416 (copb1)
Exosome [BR:
bfre04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
138620416 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
138620416
NCBI-ProteinID:
XP_069553691
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVASDSEPPSEVSLKTDLEKGDMKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRSCLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHSIKTVKIYRGALWILGEYCSTKDDIQNVMTEIR
RSLGEIPIVENEIKKETGEVKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKLALRYVAIVQDKKKQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMTDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILRSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKANI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaacgtttgttacactctgatcaatgttgcctctgactcagagcct
ccttctgaagtcagcctgaaaacagatctggaaaagggagacatgaagtcaaagactgaa
gctctgaagaaggtcatcatcatgatcctgaatggtgagaagttgccaggactgctgatg
accataattcgctttgtgctgccacttcaagaccacaccatcaagaagctgctgctggtt
ttctgggagatcgtccccaaaacaactccagacggcaagctgctccaggagatgatcctg
gtctgtgacgcctacagaaaggacctgcagcatcccaatgagttcatccgcggctccact
ctgcgtttcctgtgcaagctgaaggagtcggagttgcttgagccactgatgccagcaatc
cggtcctgtctggagcaccggcacagttatgttcgccgcaacgctgtcctggccatttac
accatctataggaactttgagcatctcatcccagatgctcccgagttgatccacgatttt
ctcgtgaatgagaaagatgccagctgtaagagaaacgctttcatgatgctgattcatgca
gatcaggatcgagctctggattacctcagcacatgtattgaccaagttcacacctttggc
gacatcctccagctggttatcgtggagctgatttacaaagtttgtcacgcaaacccttct
gagcgcgcccgttttatccggtgcatctacaacctgctgcagtcctccagcccggctgtt
aagtatgaggcagctggcactcttgtaactctctccagcgcgcccactgccatcaaggcc
gctgcccagtgttacattgatttgatcatcaaggagagcgacaacaacgtgaagctgatt
gttcttgatcgtctgattgagctgaaggagcatccaactcacgagcgcgtactccaggac
cttgtgatggacatcctgcgtgttctcagcactccagacctggaagtcagaaagaagacc
ttgcagctggcactggaccttgtctcatctcgcaatgtagaggagttggtgattgttttg
aagaaagaggtgatcaagacaaacaatgtaacggaacatgaagacactgataagtacagg
cagctcttggtgcgcactctccactcatgcagcgtacgctttcctgacatggcggctaat
gtcatacctgtgctgatggaattcctgagtgacactaatgaggcagctgcagctgatgtg
ctggagtttgtgcgggaggcaattcagaggtttgacaacttgagaccgctgatcatcgag
aagatgctggaagtctttcattccatcaaaactgtcaagatttataggggagcgctgtgg
atcttaggagaatactgcagcaccaaagacgacatccagaatgtgatgacagaaatacgc
aggtccttgggagagatcccaattgtagagaatgaaataaagaaggagacaggtgaggtg
aagccagaagacgaagtgagtgcagctccagctcagaagcttgtgacagagatgggcacg
tatgtgacgcagagcgccctcagctcctccagaccttcaaaaaaagaggaggacagacct
ccgctcagaggcttcctgatggatggagacttctatgtggcagcttccctggccaccaca
ctaaccaaattggccttgcgctatgtcgctattgttcaagacaaaaagaaacaaaattca
ttcgttgcagaggccatgctgatcatggtcactgtgttgcacctgggtaagtcctctcta
cccaagaagccaattacagacgacgatgtggatcgcatctcgctgtgcctcaaggtcctg
tcagagtgctcaccacttatgactgacatattcaacaaggagtgccgcaaatccctgtca
catatgttgactgtcagactggaggaggagaagctgtcacagaagaaagagtccgagaag
cgtaacgtaacggtgcaggcagacgatccaatctccttcatgcagctcacagccaaaaat
gagatgacatctaaagaggaccagttccagctcagtctgcttgctgctatgggcaacact
cagaggaaggaggctgctgatcctctggcatcaaaactcaacaaggtgactcagctgaca
ggcttctcagacccagtgtatgctgaagcctacgttcacgtcaaccagtatgacattgtg
ttggatgtgctggtggtcaaccagaccagtgatactcttcagaactgcaccctcgagctc
gccactttaggggatctcaagttggttgagaagccttcacctctaactctggcccctcat
gattttgctaacatcaaagctaatgtcaaggtggcatctacagagaatggcatcatattt
ggcaacattgtctacgatgtgtcgggagctgccagtgacagaaactgcgtcgtcctcagt
gacatccacatcgacatcatggactacatccagccagcctcctgcacggatgcagaattt
agacagatgtgggcagagtttgagtgggaaaacaaggtgacagtgaacaccaacatcacc
gatctgaacgagtacctccagcatatcctaaggtccaccaacatgaagtgtctgactcct
gaaaaggctctgtctggcttctgtggcttcatggctgccaacctttatgctcgttcgatc
tttggagaagatgccctggctaatgtcagcatcgagaagcccatccacctggggcctgac
gcgcctgtcaacggacacatacgcattagagccaaaagtcaggggatggctctgagcctg
ggtgacaagatcaacctctctcaaaaaaaggcaaacatctga
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integrated database retrieval system
