Brachyistius frenatus (kelp perch): 138620429
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Entry
138620429 CDS
T10614
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03015
mRNA surveillance pathway
bfre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138620429
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138620429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138620429
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
138620429
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
138620429
NCBI-ProteinID:
XP_069553719
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MASAGPAAGPSSSAEDLLDMYSDLNQNDEDLDRIAEANELFDAVLTGSVNQDKNIAAAAA
AVAPVKKLPAEEEAKSTEVKTPKEGNSMRRLSLYVGNFPWWTSDKDLTCMAQKLGVKDIA
EIKFAENRVNGQSRGYAEVVVTSEGSLKILLEKIPLCELHGERLDCRFATRQNLTVFEDT
ANKRIPLRVNSKDSKESESSDKIPSLLSQEPSPPPIPPLFPSHPLANRFPSLPSPFLGQA
PPPFPYMTPPMAPLMQPHMFPSHPVHVSSQPSPSLHINPAFFPPVQDGHSSKAYSQQKHT
PQTTDGDFEELMNRNRAIASSAITKAVSGATAGDMRVAMETLLTAIAVIKQSRVFGDERC
QALVTSLKDTLVSIQGNYGSSRSSSRSRDKERDRDRGRDRDRHRERQRDREDSSGWESAG
MSRRHRERSWSGERDKERSRERDRYRDHRDRYR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcaggacctgcagccggaccgagcagctctgcggaggatctcctcgatatg
tacagtgacctcaatcaaaacgatgaggatttggacagaattgctgaagcaaatgaactt
tttgatgcggttctcactggttctgttaatcaagacaagaacatcgctgctgctgctgct
gctgtggcccccgtgaagaagttaccagctgaagaagaggctaaatcaacagaagtgaaa
accccaaaagaaggaaactcaatgaggagactgtctttatatgttggaaatttcccctgg
tggacatctgacaaggacctgacatgcatggctcaaaagttgggtgtgaaggacatcgca
gagatcaaatttgccgagaacagagttaacggccagtcaagaggctacgcagaagtggtg
gtaacctcagaagggtccctcaaaatattgttggaaaaaatccccctgtgtgaactccat
ggggaaaggctagactgtcgctttgccactcgccagaacctcactgtgtttgaggacaca
gcaaataaacgtataccactgcgtgttaattccaaagattccaaggagtctgaatcttca
gataagattccctcattattatcacaggagcccagccctccccccataccgccactgttt
ccatcgcatccacttgcaaacaggtttccttcattacccagcccttttcttggccaggcg
cctccgccgttcccatatatgacaccaccaatggctccgctcatgcagccccacatgttc
ccttctcatcccgtccacgtgtcgagccaaccatctcccagtctgcatataaatccggct
ttcttcccaccggtgcaagacggccacagcagcaaagcttacagccaacaaaaacacact
cctcaaactacagacggggactttgaggagctaatgaacagaaatagagcgattgccagc
agtgccatcaccaaggctgtgtctggagcaacagctggagacatgagggtagccatggaa
acactgttaactgccattgccgtcattaagcagtccagagtgttcggagatgaacgctgc
caagccctggtcacctcacttaaagacactctggtctccatccagggcaactatggttcc
agcaggagtagcagtcgttctagggacaaagaaagagaccgggacaggggtcgagacaga
gaccgacatcgcgaaagacaacgtgacagagaggattcttctggctgggaaagcgcggga
atgtctcgaagacaccgagagcgttcctggagtggagagagggacaaggagcgctcacgg
gaacgggacagatacagagatcacagagaccgataccgctaa
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