Brachyistius frenatus (kelp perch): 138620523
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Entry
138620523 CDS
T10614
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138620523 (pcdh17)
Cell adhesion molecules [BR:
bfre04515
]
Cadherins
Protocadherins
138620523 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
138620523
NCBI-ProteinID:
XP_069553895
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQIGPGGQGKKANF
RVLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPIFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
QPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREMQDEFN
VTIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDP
DLGQNGTVYYSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEEHLFEIDPVTGEVRTAHPFWDDVSPIVELIIRVSDHGKPTLTAAARLI
IKASNGRPPDGLPHMKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAA
GVKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMETVP
ETESYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASSSPTKG
CSTMSPCSSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQTREQGVYPSLPPSDPVA
KVLAEARSRISQEAAGEMECVLEQVEPDGNRDGMDADQVVRDIDKLLQDCRGSEATGTLR
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttctttttcctcctattgtgggctcaagccctgacattgaaaaac
ttgaattactctgtcccggaggaacagggtccggggacggtaattgggaacattgccaaa
gatgccagacttggtctcgaacagattgggccgggaggacagggtaagaaagccaacttc
agggtgctggagaactctgccccgcatcttattgacgtggatccccaaagcggactgctg
tacacaaagcagcgcatcgacagggaaaccttgtgtaagagaaaccccaagtgccaactc
tccatggaggtgttcgccaatgacaaggagatttgtatgatcaaaatagatattcaggac
attaatgacaactcgcctatttttccttcagatcagattgatattgacatttctgaaaat
gcagtgccagggacacgctttcccctgaccagtgcgcatgacccagacgcaggggaaaac
ggcctgaaaacctatcaaataacacgcgatgattacaatctcttttccttggaggtaaaa
tcccgtggggacgggactaaattcccagaattagttattcaacgaccactggaccgagaa
gaacgaagccatcacacacttattttgtcagcgactgatgggggagaatatcctaggtca
ggtaccatgcagataaatgtcaaagtcatcgattccaatgataacagccctgtgtttgat
cagccctcgtatgttgtggaaattcctgaaaattcaccccctggtaaagtcttgattgat
ttaaacgccaccgatcctgatgagggcaacaatggacaagtagtctattcttttagtggc
tatgccccagagagaatccgggagctcttctccatagactctagaacaggggtcataaag
attcagggtgaaattgactacgaagagagcccagttattgagattgacgtccaggcaaaa
gatctgggtcccaatccaatcccaggccattgtaaagtcactgttaaagtacttgacagg
aatgataactggccatctataggctttgtgtctgtgcgacagggagccatcagtgaggca
gcgcctccaggcactgtcattgctcttgtccgtgtcacagacaaggactcaggcaggaac
gggcagcttcagtgcagagtgctgggtaatgtcccttttaaacttgaggagaactatgat
aacttctacacagtggtgacagacaggcccttggacagggagatgcaggatgagttcaat
gtcaccattgtggccaaagataatggcatacctcctctgaattctacaaaatccttcact
gtaaagattctggacgagaatgacaatgttcctcgctttacaaagtcagtctaccttctt
cagatccctgagaacaacatccctggagagtacctgggctcagttctggctcacgaccca
gaccttggccagaatggcacagtgtactacagcataatcaactccaatgtgagtgggggc
gatgtcaacacctacgttaacgtgaatgctgctaatggagccatctatgctgtgagatcg
tttaactatgagcaaataaagtactttgactttaaggttcttgctaaagatgcaggatct
ccacacctagagagcaacgctacggtgcggatcagtgttctggatgtcaacgacaacatc
ccagtcatagttttgccgcttctccaaaatgacacggctgaaatccatgttccacgtaat
gttggtgttggctacattgttaccacagtgagggcggtggacaatgactatggtgagagt
gggaggctcacatatgagatctctgatggcaatgaggagcacctctttgagatcgatccg
gtgactggggaggtgcgaacagcccacccattctgggacgacgtgagccccattgtggag
ctgatcatccgagtgtcggaccacggcaagccaactctaactgctgccgccagactcatc
atcaaggcctccaacggacgtcctcctgatggactcccgcacatgaaagacaatcagaac
tgggacatgtctctgcctcttattgtgactctaagcatcatatctatcatgcttctggct
gccatggtgaccatagctatcaagtgcaagcgggaaaacaaggagatccgaacttataat
tgtcgcattgcagagtactcgcaccctcagctggggaaaggcaagaagaagaagattaac
aagaacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatg
aatgtggtaagcagcccttccttggccacctctcccatgtactttgactaccagacacgc
ctgccactcagctcaccaaggtcagaggtcatgtacctcaagcccactgccaataacctc
agcgtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcact
acagacacacctactaaccgcatgtccatcatacagacggacaatttccccactgagcct
aattatatgggtagcagacaacagtttgttcaaagtagttcaacgttcaaagacccagag
cgagccagcctcagagacagtggtcatggcgacagcgaccaggctgacagtgatcaggac
accaacaaaggctcctgctgtgatatgtcagcaaaagaggcccttaagttgaaggctgct
ggcgtcaaaccaccacctttggaacaagatgaggattgtgtgaattgtacagaggagtgc
cgagtactgggtcactctgaccgctgctggatgccccagttccctgctggaggaaaccag
gctgagggcgttgactaccgcaacaatatgtttgtgccagccggcatggagactgtgcct
gagacagaatcctacgagactgtcaaccccaatggcaagaaaacgttctgtacttttggc
aaagagaggcgtgaccacaccatcttggttgccaacgtcaagccctacttaaaggcgaaa
cgtgctctcagcccacttctccaagaggtaccctcggcttctagcagtcccactaagggc
tgctccaccatgtctccctgctcctcagtcaaaagcccagctgacggggctgaaggtaaa
cctcctcctgccacctgctctggccactacgggcctcctgatggtcagtacctgtcacca
accaaacaaaccagagaacagggggtctacccatccttgcctccctcagacccggtggcc
aaggtgctcgcagaggcccgctccaggatcagccaagaggcagcaggtgaaatggagtgt
gtcctggagcaggtggagccagacgggaaccgtgacggaatggatgctgaccaggtggtc
agagacatcgacaaactattgcaggactgcagaggaagtgaggccactggcacactcagg
aagtga
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