Brachyistius frenatus (kelp perch): 138620724
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Entry
138620724 CDS
T10614
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138620724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138620724
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138620724
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138620724
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
zf-C3HC4
PRY
zf-RING_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-C3HC4_3
zf-C3HC4_2
F36G3_coil
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
138620724
NCBI-ProteinID:
XP_069554237
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCTTNESVQSIGAFQCPTCR
YVISLSPERGLDGLKRNVTLQNIIDRVQRASSSAGLPLPLPAPHSGPNSPGEEGSNRLAL
VPVNAAMSSPGTPPEPVQCQFCEQDPPQDAIKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDTHIRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDILIDIIQQRRQLI
GSKIKEGKAHRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDTIT
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQE
RFTSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYLTFYDAVGSQHLHTFHVSFVQPVCPV
FNVWNKCLTILTGLPIPDHLEGLEPDN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagacccg
ttgctgctcccctgcgcccatagcctgtgcttcggctgcgcccaccgcatcctcgtctcc
cactgcaccaccaacgaatctgttcagagcattggcgctttccagtgccccacctgtaga
tatgtcatctccctgagtccggagcgcggactagacggacttaagagaaacgtgacctta
cagaacatcattgacagagtccagcgggcctcatcttcagcagggctccctctaccgctg
cctgccccccacagtgggcccaactctcccggtgaggaagggagcaaccggttggcgctg
gttcccgtcaacgccgccatgtccagccccggcacacccccggagccggtccagtgccag
ttctgcgagcaggacccgccgcaggatgccattaagacgtgcgtcacatgcgaggtgtcg
tactgcgaggagtgcctccgagcgacgcacccaaacaagaagccgttcaccggccaccgg
ctcatcgagcccatgccggacacccacatcagagggctccagtgcctcgagcacgaggag
gagaaggtgaacatgtactgtgtcactgatgatcagctgatctgctcactgtgcaaactg
gttggaaggcacagggaccaccaagtggcagcactgagcgaccgctatgaaaaactgaag
caagctctggactccaacctgagtaatttgatcaagaggaacaatgagctggagtccctc
atgggaaaactgatccagacatgtcaacatgtagaggtgaatgcatcccgccaggagggc
aagctcctggaggagtgtgatatcctgatcgacataattcagcagaggaggcagctcatt
ggcagcaagatcaaagaggggaaggcgcacaggcttcggaagctcgcccaacagatttct
aactgcaagcagtgcatcgagaggtcctcggccctcatcacgcaggccgatcagacgctg
aaagaaaccgatcacgctcgcttcctgcagacggccaagagcatcaatgagagggtttcc
atggcaaccgcatcaacccaagtgctgatcccagagatacacctaacggacaccttcgac
accttcgccctggacttcacccgagagaagaagttgctggagaatctggattacctcact
gctccaagtgctccgtgcataagggaagagctgtgcacggcttcctacgacacgatcact
gtccactggacgtcggatgatgaattcacagtggtctcctatgagctccagtatgccatc
ttcaccggacagtccaacattgcaagcctctgtaactccttggagagctggatgattgtt
cccaacatcaagcagaaccactacacggtacacgggctgcagagcggcaccaagtatatc
tttgttgtcaaggccattaaccaagcaggaagcaggagcagtgaaccgggtactctgaag
accaacagccagccgttcaagctggaccccaaatcagctcacaagaagctgaaggtgtcc
cacgataacttgacagtggagcgggacgaaaccacgtccaagaaaggccacagccaggag
cgcttcaccagccaaagcagctacggcgtggtgggcaatgtctacattgacagcgggcgt
cactactgggaggctctgattggagggagcacatggtacgctgtagggatagcctacaaa
tcagcccccaagcacgagtggatcggcaagaactcggcctcctgggtgctctgccgctgc
aacaactcctgggtggtgcgccacaacagcaaggagctggccatcgagccctcgccccac
ctgcgacgcgttggggtcctgttggactacgacgccgggtacctgaccttctatgacgcc
gtgggctcccagcacctgcacacgttccatgtctccttcgtgcagcccgtgtgtcccgtg
ttcaacgtgtggaataagtgtctgaccattctcacaggcctacccatccctgaccacctg
gagggactggaacccgacaactga
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integrated database retrieval system
