Brachyistius frenatus (kelp perch): 138620812
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Entry
138620812 CDS
T10614
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138620812 (zc3h13)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
138620812 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
138620812
NCBI-ProteinID:
XP_069554461
LinkDB
All DBs
Position
Unknown
AA seq
1896 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSTTTTTTSSTTTTTTNNNNNNSNPAAPSRRPSVFERLGPST
GSNAADSHCRNWLKTGNCSYGNTCRYTHGPQPRGKGFSFSRSTERPTGDLRERMKNKRQD
VDTENLKRDLDEPTSPTQRDSSRGRHREKEDIKITKERTPASEEEPTEWETNREDSDIGD
YDYELSLEMKRQKIQRELMKLEQENLEKRDEIVVKKDETPSKVRTTALPKASPERSSSKD
SPSSRKSGGSPKSKSGTKGPGSGKKEKKAAASSPVSETASRPTKGSHGKKKGPRTPSPPP
PVPPDLPAVGKKHKGKHKNKEKSEEKQKEGKDRGRDTEKHKEKKEKRRDRSDSSNKAKRS
VTSEERSRSVSFPSGGASPSARKKSPSPKAPSHKSPAPASLPHRSPSPPRHRRSPSPPRH
RSPSSHSGSSAQRQSPSPRRRRSSSPGYRRSSAAQASASSPPSSRRSRSPPASHDASSPH
RRSDRSSPGRRRSRGRERSRGERERSPPAQERKRERRDESRGKRDKDSFRDDRDYDSEQV
SSRDARDDRDARESREQRDARDRGRETARESRDGRDNRDAKDSRESRTETRSSRESLEHR
DREREREKEREREKEKERERTDAHRKEEAAQDDRSYGRGHGREDGSRSEGRTESRTDRAD
RNGRGRGRANETSEKGSNRSSRGSQLESGHDNWDSRSGAVRERSAERSAERSANERSSEK
GSDRDRYESDRRGEPARDSSYDRRGGHGERDRRDNRDRDQRAASPNRHQGRSEEPEREER
RDERRTDRTEDRREDRTRDRDRERERERDREKEKERDREREREKEREKEKEREVERERLR
EREREREREREREREREREEREEREREREERERERERKEREREREREQRERERQREWEER
ERGRDERRERRDDGGGGGGGGRDNRSVRDTRDDRKTSRKRPRVESSPSPRPSPKRTARDL
SPADSDGYNSGEDKSERPIGRGQAKLHPPPLLPSPACPPPSDNGDKHRLLSQVVRPQDPS
LRSPPRGAASDDKSAHWKDEERRGDKRDARGRHEEPEPRPERSRAVDRRAEHLPDAPPDS
RSRGREQRDSTPPPPSSLAGGDDRDAVGSQSHEEGKKKAKSQRKGVKKGRKEEEIGACNS
PATAGDRFNPEPPTAAFSDVPPASHSPRKGAKKKALERKRKRSREGESDASEEETLARQP
HNKRKRGPRTPPPSTRPDHRGVAGGAAAPSPLSKTDNFSDWSDEEVTERGGPPETPAPPA
PAEKTLAEPLRRGGGGGLRAGRDRERCNPPPIAPLLSQDPPMLLQTMTPQPLMSQPLLRK
PPPEQTRSSSMGSNQSRASSRRPRSPSDESAHRDDPQGPRSRRGRPRGANSRDRERERER
ERPAPSELPGAERKSRIDQLRRGEPSRSTSSDRQDSRSHSSRRSSPDSERQARSRSRAGS
YDSRERERDREPFERERDRKDLRPLPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPP
MLLQQPLQQQRDWEPEPRDWPSRGREPLLMRPGREPLLRERDVRDRERLLPEGLIQQHER
ERERERERERERDGRGERGGDRDRERATMTTDPPPHGDPRAPGRGDVRGEMRGDPTRQDR
GDYEPLLPREAFGPQEADKPSNSHHLAGEQRETERTDSVDGDDDGKEDDGQSAASVGEEY
EPISDDELDEILADSQKKEDQQDDEKITGPLDVIDVDWSSLMPKQKQEPRAAGAALLRFT
PGAVLLRAGISKRLAGPELLQQVKEVCKSELDDPKDVDKLFEHDLGALNMAALNRRVERA
GLLTNLGPCCKALCARRDFAIRRQLLKNEKGLTKQYPTTPVVDNELLQMSMRLFRRTMAG
QASAPERSDGGPAPAAEVSEAGGNKLSEAQPEVCVS
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcaaagaccatatctgacagcagc
accaccaccaccaccaccagcagcaccaccaccaccaccaccaacaacaacaacaacaac
agcaaccccgccgccccctcccgcaggcccagcgtgttcgagagacttggccccagcact
gggagtaatgctgctgatagtcactgtagaaattggctgaagaccggtaattgcagttac
ggcaacacttgtcgctacacacatggacctcagccgagaggcaaaggatttagctttagc
cggtcaaccgagagacccacaggtgatctgcgggagaggatgaagaataaaagacaggat
gttgacacggaaaacctgaagcgagacttagacgagcccacgtcccccacacagagagat
tcgtccagaggccgacacagggagaaggaggatatcaagatcacaaaggagcgcacccca
gccagcgaagaagagcccacagagtgggaaaccaaccgcgaagactctgatatcggcgac
tacgactacgagttatccctcgagatgaaacgccagaagattcagcgtgaactgatgaaa
ctggaacaggagaacctggaaaagagagacgagattgtcgtcaagaaagacgagactccc
tcgaaagtccgaaccacggctttgccaaaggcctcccccgagcggtcgagctccaaagac
tcgccgtcgtccaggaagtccggcggctccccgaaaagcaaaagcgggaccaaagggccc
ggctccgggaagaaagagaaaaaggcggcggcgtcctcgcccgtgtcagagactgccagc
aggcctaccaaaggaagccacggtaagaagaaagggccccgtacccccagccctcctccc
ccggtccctccggacctcccggcggtcgggaagaaacacaaaggcaagcacaagaacaag
gagaagtccgaggagaagcagaaagaggggaaagaccgcggacgagataccgagaaacat
aaggagaagaaggagaaacgcagggaccgatcggacagttccaacaaggccaagcggtcg
gtgacgtcggaggagcgttctcgtagcgtgtcgtttccttccgggggggcgtcgccctcg
gccaggaagaaatccccctctcctaaagctccgtcccacaaatccccggcgccggcttcc
cttcctcacaggtctccatcccctccgcgccaccggcgctcccccagtcctcctcgccac
cgctccccttcctcccactcgggttcctccgcccagcgacagtctccctcgccgcggcgg
cggcgctcttcgtccccgggctaccgcaggagctccgcggcgcaggcctccgcctcctcg
cctccgagctcccggcgctcccgatcgcctcccgcctcccacgacgcctcctcgccccac
cggcggtccgaccgatcgagccccggccgacgccgctccaggggccgagagaggagccgc
ggggaaagagagaggagtccgccggctcaggagcgcaaacgcgagcgcagagacgaaagc
cgcggcaaacgagacaaggacagtttccgcgacgaccgggactacgactccgagcaggta
tcgtcgcgggacgctcgcgacgacagagacgccagggagagccgcgagcaacgggacgct
cgcgatcgagggagggagacggcccgagagtcccgggacggccgagacaacagggacgcc
aaggactcgagagagagcaggacggagacgcgctccagtcgggagtcgctcgagcaccgc
gacagggagcgagagagggagaaggagagagagcgggaaaaggagaaggagcgcgagagg
acggacgcccacaggaaggaggaagcggctcaggacgacaggagttacgggagaggtcac
ggacgcgaagacggaagtagaagcgagggacggacggagagcaggacggacagagccgac
aggaacgggcgagggagaggacgcgcgaacgaaacgtctgagaaaggctcaaacagaagc
tcccgcggatcccagctggaaagcggccacgacaactgggattcccggagcggcgcggta
cgcgaacgcagcgcggagaggagcgcggagaggagcgccaacgaaagaagctccgagaag
ggttcggaccgagatcgctacgagagcgacagaagaggagagccggcccgagactcctct
tacgacaggagaggaggacacggagagcgggatcgcagagacaaccgagacagagaccag
agagcagcttctccaaacagacatcaggggaggtcagaggagcccgagagggaggagaga
agagacgagcgcaggacagatcgaaccgaggacaggcgagaggacaggacccgcgaccgg
gacagagagcgagagagggagcgggacagggagaaagagaaggagcgggacagggagcgg
gagagggagaaggagagggagaaggagaaggagagggaggtcgagagggagcggctcaga
gagagagagagggagcgggaacgagagcgggagagagagcgggagcgcgagcgcgaggag
agggaggagcgagagagagaaagggaggagcgagagagggagcgggagaggaaggagagg
gagcgggagagggagagggagcagcgggagagggagaggcagcgggagtgggaggagcga
gagagaggacgggacgagaggagggagaggagagacgacggcggcggcggcggaggagga
ggcagggacaaccggtccgtccgagacacccgggacgatcgcaagacgagccgcaagaga
ccccgggtggagagcagcccgagcccccgaccctcgcccaagcgcacggcgcgggatctc
agtcccgcagacagcgacggctacaatagcggcgaggacaaaagcgagcgcccgatcggc
cgagggcaggccaagctccacccgccgccgctcctccccagcccggcgtgtccgcctcca
tctgacaacggagacaagcatcgtctgctgagccaggtggtgcgtccccaggacccctcg
ttacggtcgccgccgaggggagccgcgtccgacgacaagtccgcccactggaaggacgaa
gagcgccgcggggacaagagggacgcccgaggtcgccacgaggagccggagcctcgcccg
gagcgaagcagagcggtcgacagacgcgcggagcacctcccggacgccccgcccgactcc
cgtagccgaggccgagagcagcgagactccacgccgcctcccccttcgtccctcgccggc
ggcgacgacagagacgcggtcggctcgcagtcccacgaggagggaaagaagaaggccaag
tcgcagaggaagggcgtaaagaaggggcgcaaagaagaggagatcggcgcctgcaacagc
ccggctacggcgggggaccgcttcaaccccgagcccccgaccgccgctttctcagacgtg
cctccggcctcgcactctccgaggaaaggggccaagaagaaggcgctcgagcgaaagcgg
aaacggtcgcgagagggagaatcggacgcgtccgaggaggaaactttagcccgtcagcct
cacaataagagaaagaggggtcctcggacaccgccgccctcgacgagacccgatcaccgc
ggcgtagccgggggcgccgccgcgccctcgccgctttccaaaacggacaacttcagcgac
tggtcggacgaggaggtcacggagcgaggaggaccgccggaaacgccggctcccccggca
cccgccgagaagaccctggccgaacctctcaggagaggcggcggcggcggcctccgggcg
ggcagggacagggagaggtgtaacccgccgcccatcgctccgctgctctcccaggatccc
ccgatgctgctgcagactatgactccgcagcctctcatgtcccagccgctgctccgcaag
cccccgccggagcagacgcgcagcagcagcatgggcagcaaccagagccgcgcgtcctcc
cgacgcccgcgttcaccctccgacgagtccgcccaccgggacgacccccaggggccgcgg
tcgcgccgcggcaggccgcggggcgccaactctcgggatcgggagagagaaagagagcgc
gagaggccggcgccgagcgaacttccgggggcggagaggaaatctcgaatcgaccagctg
agaagaggagagcccagccgcagcacctcgtcggaccggcaagattcccgcagccacagc
tccagacgcagctctccggactccgagaggcaggcgaggtccaggtcccgcgccggctcc
tacgacagcagagagcgggagagagacagggagccgttcgagagggaacgagaccgaaag
gacctccgacctcttcctcagcaacagcaacagcaacagcaacaacagcaacagcaacag
cagcaacagcaacaacaacagcagcagcagcagcaacaacagcagcagcaacagccgccc
atgctcctccaacagccgctgcagcagcagagagactgggagcctgagcccagggactgg
ccgagcaggggacgggagcccctgctgatgcgtcccggtcgcgaaccgctcctgcgagag
cgggacgtcagggacagggaacgcttactccccgaaggactcatccaacagcacgagcgg
gagcgggagagggaacgagagagggagcgggagagagacggcagaggcgaaagagggggc
gatcgagacagggagagggcgacgatgacgacggacccgccgccgcacggggaccccagg
gctccgggacgaggggacgtgaggggcgaaatgagaggagacccgacgaggcaggacagg
ggcgactacgagcctctgctgccgcgggaggccttcggtcctcaagaggccgacaaaccg
agcaacagtcaccatctcgccggagagcagcgggagacggagaggacggacagcgtcgac
ggggacgacgacgggaaagaagacgacggccagtcagccgcgtccgtcggagaggagtac
gaaccgatcagcgacgacgagctggacgagattctggccgacagccagaaaaaagaggat
caacaagacgacgagaaaattacaggtcctctggacgtgattgatgtggactggtccagc
ctgatgcctaaacagaaacaggagccccgggcggcaggggccgccctgctccggttcacc
ccgggggcggtgcttctcagggcgggcatctccaagcgactcgccggccccgaactcctg
cagcaagtcaaggaggtgtgcaagtcagagttggacgatcccaaagatgtcgacaagctc
ttcgagcacgacctgggggccctgaacatggcggccctgaacaggcgggtggagagggcg
ggcctactgaccaacctggggccctgctgcaaggccctgtgcgcgcgcagggacttcgcc
atccgccggcagctgttaaaaaacgagaagggcctaaccaagcagtaccccactacgccc
gtggtagacaacgagctgctccagatgagcatgcgtctcttcagaaggacaatggccggc
caggcgtcggcaccagaacggtcggacggcggaccggcaccggcggccgaagtctctgag
gccggcggtaataagctcagcgaagcacagccggaggtgtgtgtgtcctga
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integrated database retrieval system
