Brachyistius frenatus (kelp perch): 138621010
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Entry
138621010 CDS
T10614
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138621010 (ddx18)
03009 Ribosome biogenesis [BR:
bfre03009
]
138621010 (ddx18)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138621010 (ddx18)
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138621010 (ddx18)
Ribosome biogenesis [BR:
bfre03009
]
Eukaryotic type
90S particles
Helicases
138621010 (ddx18)
Pre-60S particles
138621010 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
IER
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
138621010
NCBI-ProteinID:
XP_069554826
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MADLQMKLLRKKIQKRNEKNKERKLLRKRPEDEEAVSLTVNSNGLDEDCCEELQAACKTD
SEPKKKQKKVEAPAEATTAEETPPLKKTKKKRKLADPAGPPADKKSKTLKEGDEDDEKEA
AGAHGDGEKATDETQESADEEEEEEEDDKAGEEDDEEDLPELPTGLTGAFEDTSFTSLAE
LVSDSTLRAVKEMGFDHMTEIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIYKL
KFMPRNGTGVVILTPTRELAMQTYGVMKELMTHHVHTYGLIMGGSNRSAEAQRLANGVNI
VVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRRQTMLFS
ATQTRKVEDLARISLKKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFLLLFTFLKKNR
KKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDV
AARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQA
KVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVNTL
NLPMVALSFGFKVPPYVDLNVHSSKGVKMQKRGGGGGFGYQKSNAHKSKIFKHVNKGRSD
SRQFSR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctgcagatgaagctcctccgtaagaaaattcagaaaagaaatgaaaagaac
aaagagcggaaattactgaggaaacgtccagaagacgaggaggcagtgagtttgacagtc
aactcaaacgggctggacgaggattgttgtgaggaacttcaagccgcctgtaaaacagac
agcgagcccaaaaagaaacagaagaaggtcgaggcgccagcagaagcaaccacggcagag
gaaactcctcctctgaagaagacgaagaagaagaggaagctcgccgaccctgctggacca
ccagccgacaagaagagcaaaaccttgaaagaaggagacgaagatgatgagaaggaggca
gcaggagctcacggcgatggagaaaaggcaactgatgaaacacaggaatctgcagatgaa
gaagaggaggaggaggaagacgacaaagctggagaggaagatgacgaggaagatctaccc
gaactgccgactggtttaacaggggcgttcgaggacacgtcgttcacctccctcgccgag
ctggtgagcgatagcacgctgagagcggtgaaggagatgggcttcgatcacatgaccgag
atccagcacaaaagtatccgccccctgctggagggaagggacattctggccgctgccaag
acgggcagtgggaaaaccttggccttcctcatcccatctatcgagctcatctacaaactc
aagttcatgcccagaaacggcaccggtgtcgtcatacttactcccactcgtgagttggcc
atgcagacgtatggggtgatgaaggagctcatgacgcaccacgtgcacacctacggtctg
atcatggggggcagcaaccgctcagccgaggcccagaggctggccaacggcgtgaacatc
gtggtggcgacgccgggccgcctgctggaccacctgcagaacactcctgggttcatgttc
aagaacctgcagtgtctgatcatcgacgaggccgaccggatcctggaggtgggtttcgag
gaggagctgaagcagatcatcaaactgctgccgaagcggagacagaccatgctgttctca
gccactcagaccaggaaggtggaggacctggctcgcatctcgttgaagaaggagccgctg
tacgtcggcgtggacgacaacaaagacaacgccacggtggacggcctggagcagggctac
gtggtttgtccgtcagagaaacggttcctgctgctcttcaccttcctgaagaagaaccgc
aagaagaagctcatggtcttcttctcctcctgcatgtccgtcaaattccactacgagctg
ctcaactacattgacctgcccgtcatggccatccacggcaaacagaagcagaccaaacgc
accaccaccttcttccagttctgcaacgccgactcgggcatcctgctgtgcacggacgtg
gccgcccgagggctcgacatccccgaggtggactggatcgtgcagtacgaccccccagat
gaccccaaggagtacatccaccgggtgggaagaaccgcccgaggcatcaacggcagaggc
cacgccctcctcatcctccggccggaagaactcggcttcctccgcttcctcaaacaagcc
aaggtccctctgagtgagtttgaattctcctggacaaaaatctctgacatccagtcgcag
ctggacaagctcatcgagaagaactattacctgcacaagtcagcccaggaagcctacaag
tcctacgtgagggcttacgactcgcactcgctcaaacagatctacagcgtcaataccctc
aacctccccatggtggcgctctccttcggcttcaaagtccctccatatgtcgatctcaac
gtccacagcagtaaaggcgtgaagatgcagaagcgaggcggcggcggcggtttcggatac
cagaagtccaacgcacacaaatccaaaatcttcaagcacgtcaacaaaggaaggagcgac
tcgaggcagttctcccgctga
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