| Entry |
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| Symbol |
col18a1a
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| Name |
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
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| KO |
| K06823 | collagen type XVIII alpha |
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| Organism |
bfre Brachyistius frenatus (kelp perch)
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| Brite |
KEGG Orthology (KO) [BR:bfre00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:bfre04147]
138621073 (col18a1a)
00535 Proteoglycans [BR:bfre00535]
138621073 (col18a1a)
00536 Glycosaminoglycan binding proteins [BR:bfre00536]
138621073 (col18a1a)
Exosome [BR:bfre04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138621073 (col18a1a)
Proteoglycans [BR:bfre00535]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
138621073 (col18a1a)
Glycosaminoglycan binding proteins [BR:bfre00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
138621073 (col18a1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1436 aa
MATMRTQFGVLFLLAQWVVCSDAWFWSWTGTTTLAPTVDHEGSGSPVFSGEPPSESSATV
GAEIIDEGHGILRVLQTWDEATEAPQLTALLPTTQPESERASEKAASGILARKSKPEDTV
VSLLQLIGDPPPSDITLVFESDTPGYRFGPDANTGQLARAHFPSPFHRDFSLIFNLKPTS
DGGGVIFSVTDASQKIMYVGVKLSAVQGANQNVILYYTEPDSQRSYEAARFLVPSMRDVW
TRFAIAVRDDKVMFYLNCDSDPQVMPMERSPDEMDLEDGAGVFVGQAGGADPEKFLGVIG
ELRVVGDPRAAGRHCEEDEDDSDTASGEGSGVEERRPPKPDAGKFRWTTTPQSSPPIQQP
PLMRKEEVAVSRETGLAGAKGEQGDRGEKGDRGPIGPKGESGPGTSSRGGARGEKGEAGE
TGPKGSAGFGYQGKKGEPGLAGPPGPPGPPGPTAQLAGGGDGSVVSRVPASQGPVGPQGG
PGPRGQPGADGEPGDPGEDGKTGPDGPPGFPGTPGDSGPKGDKGDRGEGQPGPRGPPGPA
GPPGQGFRSTFVDMEGSGFPDVESIRGLPGPPGVPGPPGPPGPSTAGAASSPGAFGPPGK
DGAPGQPGLPGLPGTDGLPGALGARGEKGDSGELGLPGAIGQKGARGDPGLPGTAGEAGL
AGLPGPMGPIGQPGPPGPPGPSYRVGFDDMEGSGGGFTNGLPGVRGPEGIQGPPGLPGLP
GTPGFPGTPGQKGNDGLTGTDGQPGLDGFPGPPGSKGDRGDQGERGEPGQDGTGFQGPPG
PPGPPGQIVYQTSDNFDAVGRAGAQGGPGLPGQAGFPGPIGPKGDNGDPGPPGYGVKGEK
GEPGLVIGPDGNLVHLEGLTGQKGERGPSGPVGPSGQYGPAGIKGEIGMPGRPGRPGVNG
YKGEKGESAGGAGYGYPGVPGQPGPPGPPGPSGPPIPLDRFNRYDETSRNYPAIKGEKGE
HGDRGLPGIPGTASNLDIYALKNEMKGERGDLGVKGEKGEPGGGFYDPRFGGVQGPSGPP
GNPGLPGPKGDSIRGPPGPQGPPGTPGIGYDGRSGPPGPPGPPGPPGSSSLPGAYRPNHS
VSLPGPPGPPGQPGTPGHSSGVTVLRSYDTMIATARRQVEGSLIYIIDKADLYLRVRDGL
RQVMLGEYSPFFRDLENEVAEVQPPPVILYPQSQDQSHNNGAGHYSQGGSAVRPIEPPPQ
PPTDPRYPLQYEPRFPDQRHTGQTDGRLATHHTDNRHPVTPQRRPNPPVPEPAGRVDTSG
SGLHLIALNAPQSGNMRGIRGADFLCFQQARAVGLKGTFRAFLSSKLQDLYTIVRRSDRD
SSPIVNLKDQVLFRSWESIFGDNSKMRENVPIYSFDGRDILRDSAWPEKMVWHGSSNKGH
RQTDHYCETWRAGDRAVTGLASSLQSGHVLQQSSSSCSGSYVVLCIENALTTPSKK |
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| NT seq |
4311 nt +upstreamnt +downstreamnt
atggctacgatgaggacccagtttggagttttgtttctgctggcccagtgggtggtctgc
tctgatgcctggttctggtcctggaccggtactacaactttggcccccacagtggaccac
gaggggtccggcagtccagtgttcagtggagaaccgccttcagagagtagcgcaacggtt
ggagcggagatcattgacgaaggacatggcatcctgagggttttgcagacttgggacgag
gctaccgaggctcctcagctgaccgctcttttaccgacaacacaaccagagagcgaacgt
gcgtcagaaaaggccgcttctgggattttggcacgcaaaagtaaacctgaagacactgta
gtctccctgctgcagcttatcggggatcctcctcccagcgacatcaccctggtcttcgaa
tcggacacccccggctaccgcttcggcccggacgccaacacgggccagctggcacgcgcc
cacttcccgagccctttccaccgagacttttccctcatcttcaacctgaaacccacctcc
gacgggggcggggtcatcttctccgtcacggacgcctcgcagaagatcatgtacgtgggc
gtcaaactgtccgccgtgcagggcgccaaccagaacgtcatcttgtactacacggagccc
gactcgcagcgctcctacgaggcggccaggttcctggtgccctccatgagggacgtctgg
acccgtttcgctatcgccgtgagggacgacaaggtgatgttctacctcaactgcgactca
gaccctcaggtgatgcccatggagaggtccccggatgagatggatctggaagacggcgcc
ggggtgtttgtcgggcaagctggaggcgccgatccggagaagttcctgggtgtgatcggg
gagctgagggtggtgggcgacccccgggccgccgggaggcactgcgaggaggacgaggac
gattcggatacggcttcaggggaaggaagcggcgttgaggaaagaagacccccgaaacca
gacgcggggaaattcagatggacgactacccctcaatcatctccgcccattcagcagccg
ccgctgatgaggaaggaggaggtggccgtttccagagagacagggctagccggggctaaa
ggagagcagggcgacagaggagagaaaggagatcggggtccgattgggccgaagggagag
tcgggccctggcaccagctcacggggaggagcaaggggagagaagggagaagccggggaa
acgggaccgaagggcagtgccggctttggctaccaagggaaaaagggagagcctggcctc
gctggaccccccggcccccccggccctccggggcccaccgcacagttagcaggtggtggc
gatggctcagttgtgtcgagagtccccgcatctcagggacccgttggaccacagggtggc
ccaggcccccgggggcaaccgggagccgatggagagccaggtgatcctggtgaagatgga
aaaactggtcctgatggacctccaggtttccccggaacaccaggtgactctggacccaaa
ggagataagggagaccgtggtgagggtcaacccggcccccggggaccgccggggcctgcg
ggaccaccaggacaaggattcagatccacctttgtggacatggagggctcaggattccct
gatgtggaatctattcggggacttcctggcccaccaggcgtgcccggtccccctggtcct
cccggcccctcaacagctggcgcagcatcgagtcccggagcattcggaccaccaggaaag
gatggggcacctggtcaacccggcttgcctggtttaccgggtaccgatggccttccagga
gctctgggcgcgaggggagaaaagggtgattcaggcgagttgggtcttccaggagcaatt
ggacaaaagggagcccgaggagaccctgggttaccaggaactgcaggagaggctggtctg
gctggtctgcctggacccatgggaccaattgggcaacctggtcctcctggtcctccggga
ccgagctaccgtgttggattcgatgacatggagggctcaggtggaggtttcactaatgga
cttcctggcgtcagaggaccagaaggaatacagggtcctcccggcttgcctggacttccg
ggtacaccggggttccctggaactccaggccaaaagggaaatgatggtcttacaggaaca
gatgggcaaccaggcttggacggcttccccggacctccgggttcaaagggtgacagaggt
gaccaaggagagaggggtgaaccaggtcaagatggaaccggcttccaaggtccaccaggt
ccacccggaccgccaggacagatcgtctaccagacatccgacaactttgatgctgttggc
agagctggggcacagggtggccctggtttacccggtcaagctggattccccggtcctatt
ggaccaaaaggtgacaatggagaccccggtcctccaggctatggagtcaagggtgagaaa
ggtgagccaggcttagtaatcggaccagatggaaatcttgtgcatctggaagggctcact
ggtcagaagggagaaagaggaccctcaggacctgttggaccctctggtcagtacgggccg
gctggaataaagggtgaaattggaatgcctggaagacctggtcgccctggtgtaaatgga
tacaagggtgagaaaggagagtcagcgggtggtgcgggctatggctaccctggagtccct
ggccaaccaggaccacctggaccacctggaccctcagggcctcccattcctttagatcgc
ttcaatcgctatgacgaaacttcaaggaattacccagcaattaaaggtgaaaaaggagaa
catggagaccgtgggcttccaggcatcccaggaacagcctctaatttggatatttacgca
ctcaagaatgaaatgaagggggagcgcggagacttgggtgtcaagggagaaaaaggagag
cctggtggtggattttatgacccacgttttggaggagtacaaggcccctcagggccgcct
ggcaacccaggcctaccaggaccaaagggagattctataaggggccctcctggaccccag
ggacctccagggacaccagggattggttacgatgggcgttcaggtcctccgggaccacct
ggacctccaggaccaccggggtcatcctcacttccaggagcatacaggcctaatcactcc
gtcagtctccctggacctcccggtcccccgggccagcctggaactcctggtcactcctct
ggggttacagttttgaggtcatatgacacaatgattgctactgccagacggcaggtagag
ggcagcctcatctacatcatagacaaagcagacctctacctgagagtacgcgatggactg
cggcaagtcatgcttggagagtacagtcccttcttcagagatctggagaatgaggtagca
gaagtccaacctccacctgtgattctgtacccccagtcccaagaccagtcccacaacaac
ggagcgggccattactcccagggtggttctgccgtgcgacccattgagcctccaccgcag
ccacctacagatcccagataccctctacagtatgagcccagattcccagaccagagacac
acgggtcagaccgatgggagattagccacccaccacactgacaacagacaccctgtcact
ccccagcgacgacccaacccacctgtgcccgagcctgctggccgtgtcgacacatcagga
tcaggactacacctcatcgccttgaacgcccctcaatctggcaacatgcgaggcattcgc
ggggcagacttcctgtgcttccagcaggctcgtgctgtgggtctgaagggaaccttcaga
gccttcctgtcctccaagcttcaagacctctacaccatcgtccgcaggtcggaccgggac
agctcccccatcgtgaacctgaaggaccaagtgttgtttcgtagttgggagtctatcttt
ggtgacaacagcaaaatgagggagaatgtacccatctactccttcgatggcagagacatc
ctcagggatagcgcatggcctgagaaaatggtctggcatggatcaagcaacaaaggccac
cggcaaacagaccactactgcgaaacatggcgggcaggtgaccgcgctgtgactggtctg
gcatcatcactacagagcggccacgtcctgcagcaaagctccagcagctgctccggctcc
tacgtcgtcctctgcatcgagaacgccctcacaacaccctccaaaaaataa |
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