Brachyistius frenatus (kelp perch): 138621232
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Entry
138621232 CDS
T10614
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138621232 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138621232 (hnrnpm)
Spliceosome [BR:
bfre03041
]
Common components
Common spliceosomal components
hnRNP proteins
138621232 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RBD_DEAH11
RRM_3
DUF7552
Motif
Other DBs
NCBI-GeneID:
138621232
NCBI-ProteinID:
XP_069555218
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MKKAVEKVNKHNLNGRPLKVKEDPDGVIAQREINKAHGGGPPGGHGGMGGMGGGMGGMDR
MGPGPNGPMVNIPPSLMNNPNIPNEIIHGLQAGRIGSTIFVANLDYKVGWKKLKEVFGMA
GMVVRADILEDKDGKSRGMGTVTFDMPIEAVQAVSMFNGQLLFNRTMHVKLDEKSLPKDF
GPPDRGASLPRGLSGIGLGLGPGGQPIDATQLNRGGGGGGGGGGGSGGGGGGGGGGGGGG
MGNMGPGGMENFGGMNNMERFGSSGMGRMNEMDRGIGGAFDREFGRNEMGMSRNNFGDSF
ERGMGNSMGMDRMNSGMDRLGTNMDRMSGMDRMGMDRMERVSDLDRLGSGFDRMGSGMDR
LGPSMDRLGPGLDRMTSSMDRLGPSGFDRLGPSSLDRMGTGMDFSSPMGMDRMGNTGLDR
MGSNFDRMGSTGGLDRFPSGGLDRMSSGMDRMGSGGVGGQFDRSADLDRGFGGNSFGGAG
TGGPGTGGSNVRKGCQIFVRNLPFDFTWKMLKDTFNTCGMVQYADIKMENGKSKGCGVVR
FDNPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagctgtggagaaggtgaacaagcacaacctcaatggacgtccgctcaaagtc
aaagaggaccctgacggtgtgattgctcagagggaaattaacaaggctcacggtggaggt
cctccagggggccatggtgggatgggtggaatgggaggagggatgggtggaatggatcga
atgggtcctggaccaaatggccccatggtcaacattcctcccagtctgatgaacaacccc
aacatccccaacgagatcatccacggcctccaggccggcaggatcgggagcaccatcttt
gtggctaatcttgactacaaagtgggctggaagaagctgaaagaggtgtttggcatggca
ggcatggtggtgagggctgacattctggaggacaaggatgggaaaagtagaggcatgggc
accgtgacattcgatatgcccattgaagcagtccaagctgtctcaatgttcaatgggcaa
ctcttgttcaacagaaccatgcacgtcaaactggatgagaaatcccttcccaaagacttt
ggaccaccagacagaggggcttctctaccccgtggactgagtggtattggtttgggcctg
ggaccaggtggccagcctattgatgctactcagctcaacagaggaggaggaggaggagga
gggggaggtggtggtagtggtggtggtggtggtggtggaggaggaggaggaggaggagga
atgggcaacatgggccccggaggaatggagaactttggagggatgaacaacatggaacgt
tttggttcttcagggatgggcagaatgaatgagatggaccgtgggattggtggtgctttt
gacagggaatttgggcgaaatgaaatgggaatgtctcgcaataattttggagactccttt
gaaagaggaatgggaaactcaatgggtatggaccgcatgaactctggaatggaccgcctg
ggaaccaacatggaccgcatgtcagggatggaccggatgggcatggacaggatggagcga
gtgtccgacctggacaggctgggttctgggttcgaccggatgggctcgggaatggaccgg
ctggggccgagcatggacaggcttggacctggcctggatcgtatgacctccagcatggac
cgcctcggcccatctggattcgaccgcttaggcccgtctagtttggatcgcatgggcact
ggcatggacttcagctcccccatgggtatggatcgcatgggcaacaccgggctggaccga
atgggaagcaacttcgaccgcatgggctccaccggaggactcgaccgttttccctctggt
ggccttgaccgcatgagctctggcatggaccggatgggatctggaggtgttggtgggcag
ttcgatcgttctgctgacctggatcgtggatttggtggaaattccttcggaggagctgga
actggaggacctggcactggaggaagcaatgtcaggaagggatgccagatctttgtcaga
aatctgccatttgacttcacctggaagatgctgaaggacaccttcaacacatgtggcatg
gtccagtatgctgatattaagatggagaacggcaagtccaagggctgtggcgtggttcgc
tttgacaaccctgaaaccgccgagcgcgcctgcaggaccatgaacggctatcggctgaac
ggaagagagattgacgttaggatcgataggaatgcataa
DBGET
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