Brachyistius frenatus (kelp perch): 138621392
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Entry
138621392 CDS
T10614
Symbol
vps13a
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138621392 (vps13a)
Membrane trafficking [BR:
bfre04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138621392 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
DUF4770
RRM_fung
Motif
Other DBs
NCBI-GeneID:
138621392
NCBI-ProteinID:
XP_069555501
LinkDB
All DBs
Position
Unknown
AA seq
3309 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLTNLEIKENALSQLDIPFKVRAG
HIECLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQETRQRELQRIEE
TKLKAAEQENPELEKQDTFMEKLVTQVIKNLQVKISNIHVRYEDDVTNPICPLSFGVSLK
NLSLQTSDENWNPSLLDENARLFFKLVQLDNLYAYWNVNSVLFSNYSPDEALQRLHNNMD
INHSLPVNHDFIFCPISADAKLRMNPRSDVDFSFPKMDLMVNLCEVAIELNRPQYISILE
LLGSVDMMTRNLPYRKYRPTALVHNNSHIWWKYVITGILEVDVKPRLHMWSWQHIRQHRQ
MVKCYRELYKIKITSKKPSDDLLKQLEGPEKTLDIFNITLAREQAEVEASKAGLRIYRPG
LKMEEEESQGWLNWMWNWGGEADTQTKEAKTGGRMSRMDKRMCRKTTRPKRTFFFFHLYY
ILSPCPIVSGFDELLTSAEKAKLYTAIGYSDTVANPNLPKNFEDMKVDFHMERLSVSIKD
DKDKNELIRLTVGELKSTLTQRSGAQAIKLTAQLSLFEVTGLACNRPAPTLLSSRKAATG
AGSPLLCILFETNPLDDSANQRLHVESQPLEIIYDAITVNSMSVFFMLPDDLQLDELTNA
TLMKLEQFRDRTATGLLYVIETQKVLDLKMNLMASYVIIPQSGFYNGTQNILLLDLGHFK
ISSQSKKDLPQLSVGYSNIEDIVSRAYDSFDIQLSNLQFLYSKPDGDWKKARKQKQSPMH
ILQPVDLKVVFCRAMVIKDSRMAKYKISGELPLLSLRISDDKLRSVLELVESIPLPESRP
AARSAASSSKPKQFTPQLTPRKPLNLADHRSSLLFESCETISITSLGSEEDLFFDAPSSP
IGYKTFFPDNPMPLHYADLNKRKSLIKKDHQKNMTDFIMNFEISEFSVQLCRLSGGQEVT
VLHLEIEGLGTELKLCTFDMTSNTYLREICLKCPEYMDSEEKQVQLITTLDNTEVDLLTL
EYIKADKNGPEFKSQYNNTEQLIKVSFSSLDVHLHTEALLNTMNFLNNLLPPSTKKEGGQ
EELPTIPEVDEAEAEREGEKKEEATVAKKKSSKSSKFADVFNLHIRADLRCLKVFIRGQK
ARISEISIEGLVSEVLMKKKQMEVLANLKNIVILDCNKDAFYKKAVSIEDKEVFSFRMVN
YTNATEGDAYLDMSKVDTAVSLTVGCIQVIFLNKFVSSILAFINNFQEAKGALAEVTVQA
AEKAASGVKELAERSARFSLNVHFNAPIIFLPQSSSSSNVIVADLGLLSVNNCFAKQPFT
SDSKIPPVVDKMIVRLTDLKMYRSTYVNEGFHGESQLLKPVSLDLEIQRNLSSNWYHSIP
DIEITAHLKPMSLILCKDDMIVVLRTLSENLSEKSEAVPSPAGLPTTDRYSDSVSNKGSQ
DSGHTGPASSNTVVTAAVVETQKKSKLKTTLKLHFKFDSMTLVLYSINENALQLLDPHDE
QLKLAEFTLGTIATSLHMFSDSSMKAAVRLTACLLDDKRPRIKMVTPRMMAMRPGAEQNM
MVEVNYRQGRDGQSLDTVVQDVYLCASMEFLLTVADIFLKASQQGFASGSQSKSSSGAGD
KKTINSSVTSKECTPAVVSNTEIKVLVRNPEIVFVADLTRADAPALVMTTQCELVMTSNA
EGSQMTAAIKDLKVVACPFLQEKRKNNVTTVLQPCQVFCHSTQSPTSPQATKVSINALSL
KVSPIIINTVITIQSALTPVAETPEELDSPVPVDLWEKRGWKELKLWFLDEEGDEDIRSL
SPLIPQGESLQVTIKSICLTLEAGVGHRTVPMLLAKSSFHGDVKNWSTLINLHSELNLEV
HYYNEVMGVWEPLLEPLEDETRDGFRPWRLELKMKKKPVKYTGLSDEVDYNVPDYKTVIV
ISSKDQLNITLSKCGLAMLSNLGTAFAEAAKQTAECFQKDEAPFVMKNRLGLPVSVRHSE
MFCPIGQQSTNHTVEMQDGTTLGMDYSTTTDADQFSAMISLSGKDYYIQPTPVGHTSTSV
IPLIKVGRVMYSVMHKDSGVTRFLVCQIYSVEGSKHIKIRSPFQIINHFSIPFKVFEGST
CLGTSLPDVEYCVPLDSYRSELSLQPIMEDKADDQSEQFECSEGFSYEDVSNQQPETRLQ
QTCRRRGSQGGVLTVNIVPLKDAMTFKNTGGVGENFDVPFVLHLWPSILLRNLLPYPIAC
KLKNSGVSAPDATLNPGHSAQLHTAVINQSSLNLQLLNYLDQDWSSEYSLQSDQEEITFI
VFKSLREDDEDNREGTQRKRAELDIAIHVKYDLGQTVIAIHSPYWMVNKTGRLLQYKADD
IHRKHPLDYDMPLLFSFKPRYFLRNNKVRLMISDSELSDDFSLDTVGSHGDVKCKGRYKD
YLVGVKIDTSSFSLTRIVTFVPFYMLVNRTQHSVFICEEGQDNWTEAQPEESAIPFWPEN
DTKRLKIKAEGCLSPPLTIDFTRPENRLLLHLDNSVGGMIVDVNLSDHAATIRFSEYHNG
AAPFLIINHTKDQTLQFHQSFRTESSWVADELLDLSFSVEEDSSQKETEKKDLEAGKAVH
YTWTEPTGSRELCWKCSTYSGKLRSEEDLCVDINNEGKLFVTSFYEGLQRIVLFTEDQRI
YKLLCENEKAQLAEQEIILSLQNVGVSLVNNSSGQEISFIGITSSSVVWETKKKSRWKTM
STKDAEMLEKKFKEYIESGPVDNAIVDLEHSFQVSFTPNGSDMRTLQPCEAPLRRHSLPG
VKVEYSVSPRQSAYRVQIHRIQIQNQLPGSIFPYVFCPVKLPKSITMDSEPKPLTDISIV
TRTAGHSDISRIKYFKVLIQEMDLKLDLGFLYAILDLFTTENASIMTSEQKVELFEKDIE
YIKTELNHASAADTSPISLYEYFHISPIKLHLSVSLSTGGEDGLKEKRDKELIPVQSLNL
LLKSIGATLTDVQDVVFKLAFFELTFQFYTTQQLQGEVIRHYSKQAIRQMYVLVLGLDVL
GNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALVGGAVGGIAGAASRITG
AMAKGVAAITMDEEYQQKRREAMNKQPSGLREGLTRGGKGLVSGFVSGITGIVTKPIKGA
QKEGAAGFFKGVGKGLVGAVARPTGGIIDMASTTFQGIKRAAETSQDVQSLRPPRFIHED
GVIRPYKEREGIGSAMLQKIENGRFAKYRYFAHAKVNDSDFFMITKRGIFFVTKGTFGQL
ICEWQYLFDEFTKDPMIVEDRRLRIEAKERVKSVFHAREFGKIINFKTPEIAKWVLTKLE
DARESLPKY
NT seq
9930 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgagagcttggtggtagacgtcctcaaccggtttttaggggactacgttgtc
aacctcgacagctcacagctaaagcttggcatatggggaggtgatgctgttcttacaaat
cttgaaataaaagaaaatgccttgagtcagcttgacattccttttaaagtcagagccggt
catatagaatgtctggagctaaagattccatggaagaacctctacacgcaatcagtggag
gccacactggatggtgtctatctgcttatagtccccacagcaagtataaagtatgatgct
gaaaaggaggagaagcagctacaggagactcgtcagagggagcttcagcgcatagaggag
acaaagctgaaggctgctgagcaagagaaccccgagctcgagaagcaggacaccttcatg
gaaaagcttgtcacccaggtcatcaaaaacctgcaggtcaaaatctcaaacatccacgtg
cgctatgaagatgatgtcactaatccaatctgccctttgtcatttggagtgtcacttaaa
aacctcagcctgcagacatctgatgagaactggaaccccagtcttttggatgagaacgcc
aggcttttcttcaagttggttcaactggacaacttgtatgcctactggaatgtcaactcg
gtactcttctccaattacagtccagatgaggccttgcaacgtctccataacaacatggac
attaaccactcacttcctgtcaaccacgacttcattttttgtcccatctcagcggatgcc
aaactgcggatgaatcctaggtcagatgtggatttctcttttcctaaaatggacctgatg
gtcaatctctgtgaggttgccattgaactcaataggccacagtacattagcatcttggag
ctgctgggctcagtggatatgatgacgcggaacctgccatataggaaatacagacccacg
gctctcgttcacaacaattcccacatatggtggaagtacgtgatcacgggtatcctggag
gtggatgtgaagccacgtctccacatgtggtcatggcagcacattcgccagcatcggcag
atggtaaaatgctacagagagctctacaagataaagatcaccagcaagaaacccagcgat
gaccttctcaagcaactcgaggggcctgagaagaccttggatatttttaacatcacattg
gccagagagcaggctgaagtggaggcaagcaaggcaggcctccgtatttaccgtccagga
ttgaagatggaggaagaggagtcccagggttggttaaactggatgtggaactggggagga
gaggcggacacacaaacaaaagaggccaagactggaggtaggatgtcgagaatggacaaa
agaatgtgtagaaaaacaacaaggcctaagcgtactttttttttttttcatttatattat
atcctctcgccctgtcccattgtctcaggttttgatgagctattaacgtctgctgagaaa
gccaaactctacacagccattggatacagtgacaccgttgctaatcccaacctgccaaaa
aactttgaagacatgaaggttgatttccacatggagaggctgtctgtgtccatcaaagac
gacaaggacaaaaatgagctcatcaggctgaccgtgggagagctcaagtccacactcaca
cagagatctggagcacaagcaatcaaactcacagcccagctcagtttgttcgaggtcact
ggcctggcctgtaaccggccagcaccaaccctcctttcatccaggaaggcagccacagga
gcaggttccccgctgctttgcatactgtttgagaccaacccgctggatgacagtgcgaac
cagcggcttcatgtggaatcacaacccttggaaatcatctatgatgctataacagtaaac
agcatgtcagtgttcttcatgcttcctgatgacctgcagctagatgaactcaccaacgca
actctgatgaaactggagcagtttagagaccgcacagccaccggtttattgtatgtgatc
gaaacacagaaagttctcgacttgaagatgaacttgatggcctcctacgtcattattcca
cagagcggcttttacaatggcactcagaacatcctgctgttggatctcggtcatttcaag
atatccagtcaaagcaagaaggatctgcctcagctgtcagtgggctacagcaacattgag
gacatcgtgtccagagcatacgacagctttgacatacagctcagcaaccttcagttcctt
tatagcaagccagatggtgactggaaaaaggcccgtaaacagaaacagtctccaatgcac
attctgcagccagtggatctgaaagtggttttctgcagggcgatggtcatcaaagactcc
cgcatggcaaagtataagatatccggagagcttcctctattgtctcttcgtatttctgat
gataaacttcgaagtgtcctggagctggtcgaaagtatcccactgcctgagagcagacct
gctgctcgcagcgctgcctcatcctcaaagccaaagcagttcacccctcagctcactcct
agaaaacctctgaatttagctgaccaccgctcctctctccttttcgagtcatgcgagaca
atcagcatcacctcactgggctccgaagaagatttgttctttgacgctcccagctctccc
atcggttataagacgttcttcccagacaatcccatgccgctccactacgcagatttaaac
aaaagaaaatctctcatcaagaaggaccatcagaagaacatgactgacttcatcatgaac
tttgagatcagtgagttttctgtccagttgtgtcgtctgtctggaggtcaggaggtcaca
gtgctccacttggagatagagggtctggggactgagctgaaactgtgcacctttgacatg
acatctaacacctacctgcgagagatctgcctcaagtgtcctgaatacatggattctgaa
gagaagcaagttcagctgatcaccactctagacaacacagaagttgacctgctcacgctg
gagtatatcaaagcggataaaaatggccctgagttcaagtctcaatacaacaatacggag
cagctcatcaaggtgtccttctcatccctggatgttcatctccatacggaggctctcctc
aacaccatgaacttcctcaacaacctccttcctccatcgactaagaaagaaggagggcag
gaggaactccccaccatccccgaagtggacgaggcagaggcagagagggagggagagaag
aaagaggaagccactgtagccaagaaaaaaagctcaaagagttcaaagtttgcagatgtg
ttcaatctgcatatcagggctgatctccgctgcctcaaagttttcattcgaggacagaaa
gccaggatctcagagatcagtattgaaggtctggtttctgaggtcctgatgaagaagaag
cagatggaggttctggccaacctgaagaacattgtgatcctagactgcaacaaagacgcc
ttttacaagaaggctgtgtctatagaagataaagaagtgttttccttccgcatggtaaac
tatacaaatgcaacagaaggagatgcctatctggacatgtctaaagtggacactgctgtc
tcactgacagtgggatgcattcaggtcatcttcctcaacaagtttgtctcctccatactg
gcatttatcaataacttccaggaggctaaaggggcgctggctgaggtgacagtccaggct
gcagaaaaggcagcatcaggtgtgaaggaactggcagagcggagcgctcgcttctctctg
aacgttcacttcaatgcacccatcatcttcctcccccagtcctcgtcttcctcaaatgtc
attgtcgctgatctgggacttctgtctgtgaataactgttttgctaagcagccctttaca
agtgattctaagatcccgccggttgtggataaaatgattgtgagactgactgacctcaag
atgtacagatcaacttatgtaaatgaaggttttcatggagagagccagctgttgaaaccc
gtcagcttagacctggaaatccagagaaatctttcatccaactggtaccacagcatccct
gacatagagatcactgctcatctaaagccaatgagtctgatcctttgcaaggatgacatg
attgtggtcctgaggactctgagtgagaacctgtcagagaagtctgaagctgttccatct
ccagctggtctgcccaccactgaccgctactctgactctgtatccaacaaagggtcccag
gactctggacacactggaccagccagcagtaacacagtggtgacagctgctgttgtggag
acccagaaaaaaagcaaactgaagaccacgctcaagttacacttcaagtttgactccatg
accctggtcctgtacagcattaatgagaatgcgctacagctgttagaccctcatgatgaa
cagctgaagctggcagagtttactctgggcaccatcgccacctccctccacatgttctcc
gacagctccatgaaggcagcagtccgactcactgcttgccttctagatgacaagaggcca
aggatcaagatggtcaccccaaggatgatggcgatgcgtcctggagcagagcagaacatg
atggtggaggtgaactatcgtcagggccgcgatggccaatctctagacacagtggtgcag
gatgtgtacctgtgtgccagcatggagttcctgctcacggtggcagatatttttctcaag
gccagccagcagggctttgcttcggggtctcaatccaagagcagctctggtgcaggagat
aaaaagaccatcaactcctctgtcacatctaaagagtgcactccagccgtcgtgtcaaac
acagagatcaaagttttggtgcgcaacccggagattgtgtttgtggctgacctgacacgt
gctgacgccccggcccttgtgatgaccacgcagtgtgagctcgtgatgacaagtaatgca
gagggatcacagatgactgctgctattaaagacctcaaggtagtggcgtgtcctttctta
caagagaagaggaagaacaatgtgaccacagtactgcagccgtgtcaagtgttctgccac
agtactcagtctccaacctcccctcaggctacgaaggtctccatcaacgctctctcactg
aaggtatctccaatcatcatcaacacagtgattaccatccagtcagcactgactcccgta
gcagagacccccgaagagctggacagccctgttcccgtggacctgtgggagaaacggggc
tggaaggagctcaaactctggttcctggacgaggagggggatgaggacataaggtcactg
tccccactgataccacagggagagtccttacaggtgaccatcaaatccatctgtctgact
ctggaggctggagtgggacaccgcactgtgcccatgcttctggccaagtcttcattccat
ggagatgtgaaaaactggtccactctcattaatttacacagcgagcttaacctggaggtt
cactattacaatgaggtgatgggagtgtgggagccactgctggagcctttagaagatgag
acaagagatggtttccgaccctggagactggaactgaagatgaagaagaagccagtgaag
tacacaggcttgtcagatgaagtggattacaatgtccctgactataagactgtcattgtc
atcagtagtaaagaccagctcaacatcacactctccaaatgcggactggccatgctgagt
aacctgggcactgcattcgcagaggctgccaaacagacagcagagtgttttcaaaaggac
gaagctccatttgtaatgaaaaaccggctcggcctgccagtgtccgtccgccacagtgaa
atgttttgtcccattggacagcagagcaccaaccacactgtggagatgcaggatggaaca
accctcgggatggactattcaaccacaacagatgcagatcagttctcagctatgatctcc
ttgagtggaaaggactactacatacagcccactccagtgggccacacctcaaccagtgtg
atccctctaatcaaggtgggcagggtaatgtacagtgtgatgcacaaagactcaggagtc
actcgtttcctggtgtgtcagatttactctgtggagggcagcaagcacatcaagatccgc
tcacctttccagatcatcaatcatttctcaataccattcaaagtttttgaaggatctaca
tgtctgggtacatctctccctgatgtggagtactgtgtacctctggactcatataggtct
gagctgagccttcagccaataatggaggacaaagctgacgatcaaagtgagcagtttgag
tgctccgaaggcttcagttacgaggatgtcagcaaccagcagcctgagacgcgcctccag
cagacctgccgtcgccgtggaagccaggggggtgtgttgacggtcaacatcgtgccatta
aaggatgcaatgacattcaaaaacactggaggtgtcggggagaatttcgatgtgcccttt
gtgcttcacctgtggccttccatcctgctacgaaacctgctgccttaccccatcgcctgc
aaactaaagaacagtggagtctctgctcctgatgctactctgaacccaggccactctgcc
cagcttcacactgcagtcatcaaccagtcaagtctcaatcttcaactactgaactacttg
gatcaggattggtcctctgagtacagtctccagagtgaccaggaagagatcactttcatt
gtgttcaaatctctgcgagaggatgacgaagacaacagagaagggacgcagaggaagagg
gctgagttggatatagcaatccatgttaagtatgatctaggacagacggtgattgcgatc
cactcaccgtactggatggtgaacaagactggccgactgctgcagtacaaggctgacgat
atccaccgtaaacaccccctggactatgacatgcccctgctcttctccttcaagcctcgc
tacttcctgcgaaacaataaggtccgtcttatgatctcggacagtgaactatccgatgat
ttttctctggacacagtcggtagccatggagacgtgaaatgtaaaggcagatacaaagat
tatctggttggagtgaagatcgatacgagcagtttcagtctgacccgcatcgtgaccttt
gtgcccttttacatgctggtcaacagaacccagcacagtgttttcatatgcgaggagggg
caagataactggactgaggcacaaccagaggagtcggccattcccttctggcctgaaaac
gacaccaagcgcctaaagatcaaagcagaaggttgtttatcgcctcctctgaccattgac
ttcactcgaccagagaaccgccttttgctgcatctggacaactctgtgggtgggatgatt
gtagacgtaaacctgtcagatcacgcagccacaatccgattctccgagtaccacaacggt
gcggcccccttcctcatcatcaaccacaccaaagaccagacccttcagttccatcagagc
ttccggacagaatcctcgtgggtggctgacgagctgctcgacctctccttctcagtggag
gaggacagctctcagaaggagacggagaagaaggatctggaggctgggaaagctgtgcac
tacacctggactgagcccaccgggtctcgagagctttgctggaagtgtagcacttacagt
gggaagctgaggagtgaggaggacctgtgtgtggatattaacaatgagggaaaactcttt
gtgacttccttttatgaaggtcttcagcgcatcgtgctgttcactgaggatcagcggatc
tacaagctgctgtgtgaaaacgagaaggcgcagctggctgaacaggaaatcatcctgtcg
ctacagaacgttggcgtgtctctggtcaacaacagcagcggccaagagatttcctttatc
gggatcacaagctccagtgtggtttgggaaacaaagaagaagagtcgatggaagaccatg
agcactaaagatgcggagatgttggagaagaaattcaaagagtacattgaatctgggccc
gtagacaatgctattgtcgacctggaacacagcttccaggtgtcctttactcccaatggc
tcggatatgcggacgctgcagccgtgcgaagctcctctcaggaggcactccctgccgggg
gtgaaggtggagtacagcgtctcaccacgacagagcgcctaccgtgtccagatccaccgc
atacagatccagaatcagctgccagggtccatcttcccctacgttttttgccccgtgaaa
ctgccaaagtcgatcaccatggactcagaacccaaacctctgactgatatcagcattgtt
accagaacagcagggcactctgatatctctcgcatcaagtactttaaagtgttgattcaa
gagatggatctgaagctcgatctgggcttcctgtacgccatcctggacctgttcaccact
gagaacgccagcatcatgacctcagagcagaaggtggaactgtttgagaaggacatcgag
tatataaagacagaactaaaccacgcctctgctgctgacacgtctcctatcagcctctac
gagtacttccacatttcccccattaagctgcacctgagtgtgtctctgagcacgggagga
gaagatggcttgaaggagaagagagacaaagaactcatccccgtccagtccctcaacctg
ttgctgaagagtatcggagcaactctcactgatgtgcaggatgttgttttcaaactggcc
ttctttgagttgaccttccagttttataccactcagcagctgcaaggggaggtcatcaga
cattattccaagcaggctatcagacagatgtatgtgcttgtactgggcctggatgtgctt
ggaaatcccttcgggctgatcagaggattgtcagaaggggtggaggctttcttctatgag
ccctatcagggagccatccagggcccagaggagtttgttgaaggaatggctcttggggtg
aaggctctggtgggaggagctgtagggggtatagcaggtgcagcctccaggataacaggt
gccatggcaaagggggtcgctgcaataaccatggatgaggaataccagcagaagagacgg
gaagctatgaacaaacaacccagtggtctgagagaggggctgaccaggggtggaaaagga
ctggtgtccggatttgtcagtgggatcacaggaattgttaccaaacctattaaaggagcc
cagaaagagggtgcagcaggcttctttaaaggtgttggcaaaggtttggttggtgcagta
gccagacccacaggaggcattattgacatggccagcactaccttccaagggatcaagagg
gcagcggagacgtcacaggatgttcaatctctacgtccccctcgtttcatacacgaggac
ggtgtcatacgaccatataaggagagggagggcatcgggagtgcgatgctccagaaaatt
gagaatggacgttttgccaagtacagatacttcgctcatgccaaggtcaacgactcggac
ttcttcatgatcaccaagaggggaatattttttgtgaccaagggcacatttggccagctg
atctgcgagtggcagtatctgttcgacgagttcaccaaggatccaatgattgtagaggac
cgccgacttcgcattgaggccaaggagagagtgaagtccgttttccacgccagggagttc
gggaagatcataaacttcaaaactccggagatagcaaagtgggttcttaccaagttggag
gatgcaagagagagtttacccaaatactga
DBGET
integrated database retrieval system
