Brachyistius frenatus (kelp perch): 138621431
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Entry
138621431 CDS
T10614
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04510
Focal adhesion
bfre04512
ECM-receptor interaction
bfre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138621431 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138621431 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138621431 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bfre00535
]
138621431 (col9a2)
Proteoglycans [BR:
bfre00535
]
Extracellular matrix (ECM) proteoglycans
Others
138621431 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
138621431
NCBI-ProteinID:
XP_069555599
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAALSALLKTWVILQTLCLALAQVRGPPGPKGQPGPSGPSGTPGSDGIDGDKGPPGPPGS
PGQKGEPGESGPDGPPGENGIDGLIGAKGDRGPLGNPGPKGQSGPSGEPGPPGIGLPGLA
GAPGPIGLPGEIGSTGPKGILGTPGPGGLPGPPGKPGPPGKFIGGEEGSADFQCPLTCPS
GPKGPQGLQGVKGHKGRSGVLGEPGSIGKLGIKGEIGLSGEQGIPGPPGPIGLRGYPGMM
GPKGEAGPRGYKGINGPVGIPGPPGEEGPQGPPGEAGDKGDKGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQSGMPGPPGPQGAAGLPGSPGAKGGAGAKGEPGLRGHI
GMSGASGPLGEPGVPGEPGMEGVPGPKGDRGQRGEVGPQGVVGKPGGKGERGPIGVPGAQ
GLSGTKGDQGFQGKVGSKGDVGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDLGHNGPT
GDPGKPGDQGPIGLSGPRGLNGERGVPGIPGIRGPPGRDASDQHIIEVVLKMLQERLAAV
AVSANRAVLGGAGVMGPPGPPGPPGSPGPQGPHGLPGGRGIPGIIGAHGQIGNTGLKGKR
GAKGDRGDPGKPHPGPPGPSGIPGPPGVDGVARDGRHGETGPQGSAGEAGRPGKAGPQGL
PRFCETAMCLAASAYTSPRLQEAGRIKGPHV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggttatactgcagaccttgtgcctggct
ctggcccaagtgaggggtccccctgggcctaagggccagccaggcccatcaggcccctct
ggcactcctgggtcagatggcatcgatggagataagggacctcctggcccccctggttca
ccagggcaaaagggagagcctggagagtcgggtcctgatggaccaccaggagagaatggc
attgatggtttgattggagcaaagggtgatcgaggtcctctcgggaatcctggtccaaag
ggtcaatcaggtccaagtggtgagcccggacctccgggaatcggcctcccaggtctggct
ggtgctccggggccaattggtcttcccggtgaaataggatcaactggcccaaagggtata
ttgggaacacctggacctggaggacttcctggacctcctggcaaaccaggtcctccaggc
aaattcattggtggagaagagggcagtgcagacttccagtgtcctcttacctgtccatca
ggaccgaaaggcccccagggactgcagggagtgaagggacacaaaggacgttccggtgtt
ctcggagagcctggtagcatcggaaagctgggcatcaagggagaaataggcctctctggg
gaacagggcatcccaggacctccgggtccaattggtctgaggggttatccaggaatgatg
ggtcccaaaggagaggcaggtcctcgtggttataagggcatcaacggacctgtaggaatt
cctgggcctcctggtgaagaaggacctcagggaccgcctggagaggcaggggacaaggga
gacaaaggcagccgaggtatccagggcccgcagggtgcggttggcaaaaagggagagaat
ggtctgccgggtattgatggaaaagatggcacacctggtattcctggaatcaagggtggc
cctggacagtctgggatgcctggtcctcctggtcctcagggagcagcggggttacctggg
agcccgggggcaaaagggggagctggtgctaagggggaacctggccttcggggtcatatt
ggcatgtctggtgcctcaggacccctgggtgagcctggtgttcctggtgagcctggtatg
gaaggagtccctggacccaagggtgaccgaggccagcggggagaggttgggccgcaggga
gtcgtcggcaagcctggaggcaaaggagagagagggcccatcggtgtcccaggtgcccag
ggtctcagtggaacaaagggagaccagggcttccaaggaaaggtcgggtccaagggagac
gtcggtgaccccggcgttgagggattggctggcgagaaaggtgaaaagggtttgtctggc
gaacccgggcccaaaggacagcaaggaattaggggtgacctcggacacaatggaccaact
ggagaccctggtaaaccaggagaccagggacctatagggctgtctggtcctaggggactt
aacggagagcgaggagtacccggcataccaggcattcggggaccaccaggacgcgatgca
tctgaccagcacatcatcgaagtggtgctgaagatgttgcaggagaggctcgcagctgtg
gccgtgagcgccaacagggccgtgcttggtggtgcaggtgtaatgggacctcccgggccc
cctggacctccagggtcgcctggcccacaggggccacatggcttacctggtggtcgtggt
atccctggtataattggagcacatgggcagattggaaacacagggcttaaaggaaagaga
ggggcaaagggagatcgaggagatccaggtaaacctcacccaggaccaccaggaccctca
ggaataccaggtcctcctggtgttgatggtgtggctcgggacggtaggcacggcgaaaca
ggacctcagggatcagctggagaggctggtcgccccggtaaggcgggcccgcaaggtctc
ccaaggttctgcgagacggcgatgtgtctggctgcgtcggcgtacacctcaccgagacta
caagaggcgggaagaatcaaaggaccccatgtttag
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