Brachyistius frenatus (kelp perch): 138621894
Help
Entry
138621894 CDS
T10614
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bfre01001
]
138621894 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138621894 (trim24)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138621894 (trim24)
Protein kinases [BR:
bfre01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
138621894 (trim24)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138621894 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
PHD-1st_NSD
zf-C3HC4
PML_CC
FemAB_like
Motif
Other DBs
NCBI-GeneID:
138621894
NCBI-ProteinID:
XP_069556339
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MDESAENVDNDDIVIIVENEAESLPAGEERLKQQGTFGLMDTCPICKLSFHNREPKLLPC
LHSFCKRCLPAPFRSADPRRDPQGQVDNTKPLGAIRCPVCRQECWEMDVLDNFFVKDSAE
VPSSTVEKNSQVCMSCDDNTEATGYCVECVEFLCVTCIEAHQRVKFTRDHTIRQKEEMSP
EAVGISQQKPVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQYL
ENMTQQLQEKRKAIEDVSSCINTGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILVNQ
LEALTKDHELGLKKQKDDVNSLSRHLDHVINFTKWATASHSGTALLYCKRLILYQIHYLM
RASCNPSIVPQSSVRFQCRSGFWATNVDLGSLVVERGPGRLPVTNHQAGPRAEVPSGGLS
VSAQQRQSTLAQLQMQVDKLSQQPHRQPAPNHWSWYQNVRLPGPPGPPPPTRPIHGGSSP
SQGPPNLAQPGRRYGSSQPNPRSPTSSMLHNTGFPPTQTLRDLIHSSSFPPKPIDGSQGT
SRYSQPLSAGAAPHTSLHQRCLPESSFLKRSEAGGSVPSITISIPKPSFAQSLASATADK
TSALNHIAVQGRQNSPIAKPSPSDKSTGTSPWKQISEPPSAPAAKRRRRTSPGPIIVIKD
EPEDEDEVHFVQSSVGSSLPDSSTGAQSKPRQQQKGPAPAPVLGSDSKDQRPHPPSQPVS
EKTAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLACHIPTLNESPSGEWFCSFCRDLV
SPEMEYDCDNKDGAVSEKFPHVERRRCERLLLRLFCNDFSTDFQQPASPSETKRYKELIK
TPMDLSMVKKKLQSKDGECYVSPEGFVADVRLIFFNCAKYYKSTSEVGSAGLYLEDYFEE
QLKLAYSDKVFPGSREEQMIPPLEDEIDEEEEEMMEEGMAPIEDDKPQSPADKGIPPVEE
DLAPLDETTAPAEEEKPETEKKASEAREEDTDKVVAVTEEGTPQAEEVKQDESTPATQEE
TCPAAESETKEGAAPSSPKEENPQLPPDKTADPPEAQEKEKMEEEQKKNKEEEEEKKEEE
EENKEEENKEEEQEEEEQEKEEQSVAPADPAKEEEG
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtgccgaaaatgtcgacaacgacgacattgtcattatcgtggaaaacgag
gccgaaagtttgccggcaggagaggagaggctgaaacaacaaggcaccttcgggctcatg
gacacctgtcccatctgcaagctgagcttccacaacagagagcccaagctgctgccgtgt
ctccactccttctgcaagaggtgtctgcctgcccccttcaggagcgctgacccgcggcgt
gacccgcaggggcaggttgacaacaccaaaccattgggtgccattcgatgtccagtatgc
agacaggaatgctgggagatggacgtattggacaacttctttgtcaaggactccgcggag
gtgccgagcagcaccgtggaaaaaaacagccaggtgtgtatgagctgtgacgacaacacg
gaggcgaccggttactgtgtggagtgtgtggagtttctgtgcgtgacgtgcatcgaggcg
caccaacgggtcaagttcaccagagaccacacaatacgtcagaaggaggagatgtctcca
gaagcagtaggcatatcccaacagaagcccgtgttttgtgacgtgcacaagcaggagcca
ctgaagctgttttgtgagacgtgtgaccgactcacctgtcgagactgtcaactcctgaag
cacaaggatcacaactaccagtttttggaggacgcgtacagaaaccacaggcagtacctt
gagaacatgacgcagcagctgcaagagaaaagaaaagccattgaggacgtatccagctgt
atcaacaccggactgcagcaagttgaagaaaatcggaaagctgtcactaatgaaataaag
aagtccatctgcaacttgatcatggagatcaacaggaagggaaagattctggtgaaccag
cttgaggccttgacgaaggaccatgagttgggtttgaaaaagcagaaagacgacgtcaac
tctctgagccggcacctagaccacgtcatcaacttcaccaaatgggctacagcaagccac
agcggaacagctctcctgtactgcaagagactgatcctgtaccagatccattacttgatg
agagcgagctgtaatccctccatcgtccctcagagttctgttcgcttccagtgtcgctct
ggtttctgggccacaaatgtagacctcggttctttggtcgtagaaagaggcccaggcagg
ctacccgtcaccaaccaccaggcaggtcccagagcagaagtacccagcggaggtctctct
gtctcggctcagcagcgccagagcacgctggctcagctccagatgcaggttgacaaactt
tcccagcagccccacaggcagcccgcgcccaaccactggtcctggtaccaaaatgtcaga
ctcccaggacctcccggccctccgcccccaaccaggcccatccacggagggtcttcccca
tcccaaggcccccccaatttggcgcagccaggccgtaggtatggaagttcccaacccaac
cccagaagccccacatcgtccatgcttcacaacacgggcttcccccctacacagactctg
agagatctgatccatagctccagcttccctcctaaacccatagatgggtctcagggtact
tcccgctactcacagcctctgagcgccggagcagctcctcacacgtcactacaccagaga
tgcctacccgagtcctccttcctcaagaggagtgaagctggcggatctgtcccctccatc
accatctctatccctaaacccagcttcgctcaaagtctggcctccgcgaccgcagacaaa
acaagcgccctcaatcacatagcagttcaaggaaggcagaactccccgatagccaagccg
tctccttcagacaaaagcacggggacgtctccttggaagcagatttcagagccaccatcg
gctcctgcagccaagcgacgaagaaggacgtccccggggcccattattgtcatcaaggac
gaacctgaggatgaagatgaagttcattttgtgcagtccagtgttgggtccagcctccca
gatagcagcaccggcgctcagtcaaagccccggcagcagcagaagggacctgcaccggcc
ccggtcctcggatcagactccaaagaccagcgtccccatcccccctcgcagccagtgtct
gaaaagacggcagaaccagaggaagatccgaatgaggactggtgcgccgtctgtcagaac
ggaggagagctgctctgctgtgacaagtgtcccaaagtttttcatctggcctgccacatc
cccactctgaacgagtcgcccagtggcgagtggttctgttcgttctgccgagacctcgtc
tcccctgagatggagtacgactgcgacaacaaggacggcgcagtctcggaaaaattccct
catgtcgaaagaaggagatgtgagcgactgttattgcgtctgttctgcaatgacttcagc
actgacttccagcagcccgcttcgccgtcggagacaaaacggtacaaagaactcataaag
accccgatggatttgtccatggtgaagaagaagttgcagtcaaaggacggggaatgttat
gtcagtccggagggatttgtcgcagatgtcaggctcatatttttcaactgcgcaaagtac
tacaagtcaacctcggaggtcgggagtgcaggcttgtacctggaggactattttgaggag
cagctgaagctcgcctactccgacaaggtcttccctggaagtagggaagagcagatgatc
cctcctttggaggacgagatagacgaagaagaggaagagatgatggaggaaggcatggct
cccattgaagacgataaaccacaaagccctgcggacaaaggaatcccacctgtagaagag
gacttggctcctctggatgaaacgacagccccggcagaggaggaaaagcccgaaacagaa
aagaaggcgagtgaggctagggaagaggacacagacaaagtggtcgcagtgacggaggaa
ggcactcctcaggcagaggaggtaaagcaggatgagagcactcctgccacacaggaggaa
acctgcccagctgctgagagtgaaacaaaagaaggagcagctccgagctccccaaaagag
gagaatcctcagctccctccagacaagaccgcagatccccctgaagctcaggagaaggag
aagatggaggaggagcagaagaagaacaaggaggaggaggaggagaagaaggaggaggag
gaggagaacaaggaggaggagaacaaggaagaggagcaggaagaggaggagcaggagaaa
gaggagcagtcggtggctcctgcagacccagccaaagaggaggagggataa
DBGET
integrated database retrieval system
