Brachyistius frenatus (kelp perch): 138621967
Help
Entry
138621967 CDS
T10614
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04510
Focal adhesion
bfre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138621967 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138621967 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
EGF_Teneurin
DUF3887
Motif
Other DBs
NCBI-GeneID:
138621967
NCBI-ProteinID:
XP_069556497
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MSPFFDASPACNCDPSGSLQGGLCDSRTDVAAGLISGQCRCKANVEGERCDHCRQGHHGL
GQGPHGCLACTCNPLGTLPGGNSCDSETGSCFCKRLVDGQNCDQCLVRIQTQLLHSVWIF
FYLSCLCESQTSVFCPLQPQHWGLSHDMDGCRPCDCDQGGAVNNNCDSLSGQCACRERMF
GRRCDQVESGFYFISLDHYTYEAEDAEHGPGVKVVPRPYPAGRSPTWTGVGFANVPEGAY
LEFNVDNIPESMEYDVLIRYEPQLPEQWEKVNIQVRRPVFNPPNYSAHCSNSIQGEDEQS
ISLPPGSRHVLLVRPVCFEKGLNYTVRLSLPLYSSGSGVQSPYTLLDSLVLMPRVRELDM
FHGVEGEGAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHKGAVACQCDPQGSL
SAVCDSSGGQCRCRANVVGRNCDHCGPATFLFSPSGCRPCDCDPRGAVSAFCHEATGQCE
CVSGATGRQCAHCLPGYWGFPQCRQCHCNGHSEYCNPQTGECQGCRDFTTGHQCERCLDG
YHGDPELGSGGHCRPCMCPDGPRSGRQFADSCYLLSNTNQLVCVCSPGYKGARCDSCSPG
YYGNPLVPGGRCTACQCNNNIDMHDPGSCDTRTGACLKCLYHTQGHVCQHCKLGYYGNAA
TQSCRKCMCSSEGTLPQACSSPDDCQCDQRGGQCPCQPNVVGQNCDRCADDTWNIASRTG
CQRCDCDPVHSLRSSCHEVTGRCVCKPGFGGRTCRECKELFWGDPEVKCHACDCDSRGIS
SEQCHHATGQCTCVEGVSGPRCDKCARGYRGEFPACERCHECVAVWDAVVGELTNQTRRL
EAQVTELLTSGVTAPYKELVGSLETNVKAVREIVEKNPAAVQLEQIQDLTHQITGLMSFL
NGKLNTTEETLNLLHDDANATDANLDALTDESDRLERTVRELRQQVQDTKNANIHGAMGT
IAAAHMQSRNAELLAKASTSDPGNTVELSAAVRKSTEDRLSGGQKEFDRKHQRNTQKLDK
LSKDLEKSDLSPLSEKTCGGGAAEGDDCSPCGGLGCVGEDGAPRCGGEGCRGLVTASRTA
LKSANNLDREILAAMQEVDKLSRMVWEANTRANEAKMNALEVLVKSNRSKERVEQSNEQL
RSLIKEIRDLLTNEKADVSVIEAVANEVLALEMPVSTEKLQELTKEIREKVGTLTSVESI
LSQSAEDIEAAEALLKQAKAANDEASNMKDTADVVKEALEETERAQSIAMDAIQLAQNNT
KGTLDLLISVESETAMSELKLGNTTGRLVQLEREVGLLRQNSLEVTRLAETADRFTDQAR
LNAEEAQQEFDEEVKDKLEVVEEQVEDKGESVLQARRRADQLQIEANELLALSSTKLQRL
GELESSYEANQRVLEAKAAELDELERTARRILDEISYKVTLYSTCL
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctttttttgacgcctccccagcgtgcaactgcgacccgtccggctccctgcag
ggcggactgtgcgactcgcggaccgacgtggccgccgggctgatctcgggccagtgtcgg
tgcaaagccaacgtggagggcgagcgctgcgaccactgcagacagggacaccacggactg
ggacaagggccgcacggctgcttggcttgtacctgcaacccgctgggaacgctgcccgga
ggaaactcctgtgattcagaaacaggaagttgcttctgcaagcggctcgtcgacggacag
aactgcgatcagtgtctggtgcggatccaaacgcagctgttacactctgtttggattttt
ttttacctctcgtgtttgtgtgagtcacaaacgtctgttttctgtcctctgcagccgcag
cactggggtctgtcccacgacatggacggctgcaggccgtgtgactgcgatcagggcggg
gccgtcaataacaactgcgactctctctcgggacagtgcgcgtgccgggagcgaatgttc
ggccggcgctgcgatcaggtcgagtcgggcttctacttcatctctctggatcactacacg
tacgaggccgaggacgccgagcacggaccgggggtgaaggtggtgccgaggccgtatccg
gcgggtcgcagtcccacctggaccggcgtgggcttcgccaacgtgccggaaggagcctac
ctggagttcaacgtcgacaacatcccggagtccatggagtacgatgtcctgattcgctac
gagccgcagctacctgagcagtgggagaaggtgaacatccaagtgcggcgtcccgtcttc
aaccctccaaactactcggctcactgcagcaactccatccagggcgaagacgagcagtcc
atctctctcccacctggatccaggcacgtgctgctggtgaggccggtgtgtttcgagaaa
ggactgaactacacggtccgtctcagtctgccgctctactcgtccggcagcggagtccag
agcccgtacacactcctcgactccctggtgctaatgccccgggtcagagagctggacatg
ttccacggggtcgagggcgagggagcgtgggacacgttccagcgctaccgatgtctggag
agcagccagagcgtcgtcaaaagcccgctgacggacatctgcaacgactacatcttcagc
gtctccgctctgctgcacaaaggagccgtggcgtgccagtgtgaccctcagggttcgctc
agcgccgtctgcgattcgagcggaggtcagtgtcggtgtcgagccaacgtcgtgggcagg
aactgcgaccactgcggtccggcgacgttcctgttcagcccctccggctgcagaccttgc
gactgcgacccgcgcggcgccgtcagcgccttctgccacgaggcgaccggccagtgcgag
tgcgtttccggggcgacgggccgccagtgcgcccactgcctgccgggctactggggcttc
cctcagtgccggcagtgccactgcaacggccacagcgagtactgcaaccctcagaccgga
gagtgtcagggctgcagggacttcaccaccgggcaccagtgcgagagatgtctggacggt
taccatggcgacccggagctgggttcaggcggccactgtcgcccgtgtatgtgtccggac
gggccgcgcagtggacggcagttcgcagacagctgttaccttctgtccaacaccaaccag
ctggtgtgtgtgtgcagccccggctacaaaggtgccaggtgtgacagttgctcccccggt
tactacggcaaccctctggtgcccggcgggcgctgcacggcctgccagtgcaacaacaac
atcgacatgcacgacccggggtcctgcgacacccgcacgggcgcctgcctcaaatgcctg
taccacacgcagggccacgtctgccagcactgcaaactgggttactacggcaacgccgcc
acgcagagctgcaggaagtgtatgtgttcctcggaggggacgctccctcaggcctgctcg
tcccccgacgactgtcagtgcgaccagcgcggcggtcagtgtccctgccagcccaacgtg
gtcggtcagaactgcgaccgctgcgccgacgacacgtggaacatcgccagccggaccggc
tgccagcgctgcgactgcgaccccgtccactccctcagatcctcctgccacgaggtcact
ggacgctgcgtgtgcaaacccggattcggtggccggacgtgtcgggagtgcaaagaactg
ttctggggggatccagaggtcaaatgtcacgcttgcgactgcgactcccgggggatctcc
agcgagcagtgtcatcacgccacgggacagtgcacctgcgtggagggcgtgtcgggccct
cggtgcgacaagtgcgcccggggctaccggggcgagttccccgcctgcgagcgctgccac
gagtgcgtcgccgtctgggacgcggtggtcggcgagctgaccaatcaaacccgacggctg
gaggcgcaggtgacggagctcctgaccagcggggtgacggcgccgtacaaagagctggtc
ggcagcctggagacaaacgtgaaggccgtcagggagatagtggagaagaaccccgcggcc
gtgcagctggagcagatccaggatctgacgcatcagatcacgggtctgatgtccttcctg
aacgggaagctgaacacgaccgaggagacgctgaaccttctccacgacgacgccaacgcc
accgatgcaaacctggacgcgctgacggatgagtccgaccggctggagcggaccgtccgg
gagctccgacagcaggtccaggacaccaagaacgccaacatccacggcgctatgggcacc
atcgccgctgctcacatgcagtctaggaacgcagagctgctcgccaaggcctccaccagc
gaccccggcaacacggtggagctgtcggccgcggtacggaaatccacggaggaccgactg
agcggcggtcagaaggaattcgaccgaaagcaccaaagaaacacgcagaagctggacaag
ctctccaaagatctggagaaatccgacctgtcgccactgagcgagaagacgtgcggcggc
ggtgcggctgaaggcgacgactgctccccctgcggcgggctgggttgcgtcggcgaggac
ggagcgcctcggtgcggaggagaaggttgtcgaggcctcgtcaccgcctctcgaacggcc
ctgaaatcagccaacaacctggaccgggagatcctcgccgccatgcaggaggtggacaag
ctctccaggatggtgtgggaagccaacacacgcgccaacgaagccaaaatgaacgctttg
gaggttctggtcaaatccaaccgtagcaaagagcgagtggagcagagcaacgagcagctg
cgcagcctcatcaaggagatccgggacctcctcaccaacgagaaggcggacgtgtccgtg
atcgaggcggtggccaacgaggtgctggcgctggagatgccggtctcgacggagaagctg
caggagctgacgaaggagatccgggagaaggtcggcactctgaccagcgtggagtcgatc
ctcagccagagcgccgaagacatcgaggcggccgaggcgctgctgaagcaggcgaaggcg
gccaacgacgaggcgtccaacatgaaggacacggccgacgtggtgaaggaggcgctggag
gagaccgagcgcgctcagagcatcgccatggacgccatccagctggcgcagaacaacacg
aagggaacgctggacctgctgatctcggtggagtcggagacggccatgtcggagctgaag
ctcgggaacacgacgggtcgcctggtgcagctggagagggaggtcggcctgctgaggcag
aacagcctggaggtgacccggctggcggagacggccgaccgattcaccgaccaggcccga
ctgaacgcggaggaggcgcagcaggagtttgacgaggaggtgaaagataaactggaggtg
gtggaggagcaggtggaggataaaggggagtcggtgctgcaggcgaggaggagagcggac
cagctgcagatagaagccaacgagctgctcgctctgagcagcacgaagctgcagagactc
ggagagttggagagctcctacgaggccaaccagcgcgtcctggaggccaaagctgcggag
ctggacgagctggagcgaaccgcgcgccgcatcctggacgagatcagctacaaagtgacg
ctttacagcacctgtctgtga
DBGET
integrated database retrieval system