Brachyistius frenatus (kelp perch): 138622062
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Entry
138622062 CDS
T10614
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138622062 (ddx56)
Ribosome biogenesis [BR:
bfre03009
]
Eukaryotic type
Pre-60S particles
Helicases
138622062 (ddx56)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138622062
NCBI-ProteinID:
XP_069556628
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Position
Unknown
AA seq
566 aa
AA seq
DB search
MDDERLQFHEMGLDDRLLKAVADLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AIPVIQRILTSKQSVREQDVRALILVPTKELGQQVQTMIRQLTMFCSRDVRVANISSKAD
LSAQRPILMEKPDVVVGTPSRVLAHLSTQNLVLHSSLEMLVVDEADLIFSFGFEADLKNV
SCHLPKIYQSFLMSATLTEDVQALKELLLHNPVILKLQGSQLPNSSQLHQYGIKCEEEDK
FLLIYTLLKLRLIQGKTLVFVGEVERCYRLKLFLEQFGIPACVLNSELPIHSRCHIITQF
NQGFYDYIIATDEQCLADPATTAQTTAAAAAAGKQKKKKKVSEKGGRGKDKEYGVSRGVD
FQNVSNVINFDFPPTVNSYIHRVGRTARADNPGSALSFISHTELEKLSEVEEALAGDKAD
SVLKPYKFKMEEIEGFRYRCRDAMRSVTKQAVKEARLKEIKQELLNSEKLKTYFEDNPRD
LQLLRHDKDLHPAVIKPHLKNIPEYLVPASLRGAMHPLSAKRRRWREKPKAEGVVKGSFK
NIQGKNPLRSFRYIGGRNRKGEADKS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgagcggctgcagtttcacgaaatgggcctcgacgaccgtcttttaaaggcg
gtcgcagacctgggttggtccaggcccactctgatccaagagaaggccatccctctggct
ctggaggggaaggacctgctggccagagcccggaccggatccggaaagaccgcagcctac
gccatccccgtcattcagcgtatcctgacctccaaacagagcgttcgagagcaggacgtg
agagctctgattctggttccgaccaaagagctgggtcagcaggtccagaccatgatccga
cagttaacgatgttctgctcgagggacgtccgagtggccaacatctccagcaaagctgat
ctgtcagcgcagaggcccatcttgatggagaagcccgacgtggtcgtggggacgccgtcc
cgcgtgctcgcccacctcagcacccagaacctggtcctgcattcctccctggagatgctg
gtggtcgacgaggccgacctcatcttctccttcggcttcgaggccgacctgaaaaacgta
tcctgccacttaccgaagatctaccagtccttcctgatgtcggcgactctcaccgaggac
gtccaggccttgaaggagctgctgctgcacaaccctgtgatcctgaagctgcagggctcc
cagctgccgaacagcagccagctgcaccagtacggcatcaaatgcgaggaggaggacaag
ttcctgctcatctacacgctgctgaagctgcggctgatccaggggaagacgctggtgttc
gtgggagaagtggagcgatgctacagactcaaactgttcctggagcagttcgggattccc
gcctgcgtcctcaactctgagctgcccatccactccaggtgtcacatcatcacccagttc
aaccagggattctacgactacatcatcgccacggacgagcagtgtttggccgacccggcc
accactgcacagacgacggcggcggcggcggcggcggggaaacagaagaagaagaagaag
gtgtcagagaaaggaggaaggggtaaagacaaagagtacggcgtctccagaggcgtggac
ttccaaaacgtctccaacgtcatcaactttgacttcccgccaaccgtaaactcctacatc
catcgagttggacgaacggcgagagcggacaacccgggcagcgctctgtccttcatctcg
cacaccgagctggagaagctgtcggaggtggaggaggcgctcgccggagacaaggccgat
tctgttctgaagccgtacaagttcaagatggaggagatcgaaggcttcaggtaccggtgc
agggatgcgatgcgttcggtgacgaagcaggcggtgaaggaggcgagactgaaagagatc
aaacaggagctgctgaattccgagaaactcaagacgtatttcgaagacaaccccagagat
ctgcagctgctcagacacgacaaggacctccaccccgccgtcatcaaacctcacctgaag
aacataccggagtatctcgtcccggcgagtctgagaggcgcgatgcatccgctgtcggcc
aagaggaggcggtggagggaaaaacccaaagcagaaggagtcgtcaagggcagtttcaag
aacatccaggggaagaacccgctgaggagtttccgctacatcggaggcaggaacagaaaa
ggcgaagcggacaagtcgtag
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