Brachyistius frenatus (kelp perch): 138622379
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Entry
138622379 CDS
T10614
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03030
DNA replication
bfre03410
Base excision repair
bfre03420
Nucleotide excision repair
bfre03430
Mismatch repair
bfre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138622379 (pold1)
03410 Base excision repair
138622379 (pold1)
03420 Nucleotide excision repair
138622379 (pold1)
03430 Mismatch repair
138622379 (pold1)
03440 Homologous recombination
138622379 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfre03032
]
138622379 (pold1)
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138622379 (pold1)
Enzymes [BR:
bfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
138622379 (pold1)
DNA replication proteins [BR:
bfre03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
138622379 (pold1)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
138622379 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
138622379 (pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
138622379
NCBI-ProteinID:
XP_069557232
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPFVGGASQAKRGKAAGEWEDSPSHFEEELSMFDEAEMDAEEMEGQAGHDVI
PVGDLFSADLNPRWRRPQAPSLDPSADTLVFQQIDLDYYLGATVAGMPGQLQGKVPIIRM
FGVTDSGISVCCHIHGFAPYFYIPAPSGFTSSNLGEFKRELNSAVLKDMRSNKDNIAITV
LAVDITRKENMYGYQGRQILDFLRITMAMPRLIAPAKRLLEQGLKFGTFPIQSYQSFEAN
IDFEIRFMVDCDVVGCCWIELPKGKYRLREEKSAADADSQSSGKVSLCQYEVDVGWTDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIIGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAATLKVN
YFPYLGRMRGVKSVMRESNFQSKQMGRRENKSINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAVKQDLVMPVVKTQGGEDYTGATVIEPEKGYYSL
PITTLDFSSLYPSIMMAHNLCYTTLLQKGTAEKLGLSPDDFIKTPTGDQFVKSSVRKGLL
PEILENLLSARKSAKTELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIETTKQLVESKYTISNGYQADAKVIYGDTDSVMVKLGVATVREAMEIGK
EAAESVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHEKMDCKGIETVRRDN
CPLVANLINTCLQKILIDRDPEGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAA
KQAHVELAQRMRKRDAGSAPNLGDRVPYVIIKSAKGAAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKIGGLMAFAQRRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHQNALEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagagacgcaatggtggccctttcgtcgggggcgcgtcccaggccaaacgg
ggcaaagcggctggtgaatgggaggacagcccgtcgcactttgaagaggagttgtcgatg
tttgacgaagcagagatggatgcggaggagatggaggggcaggcggggcacgatgtcata
cccgtaggtgaccttttctcagcagaccttaaccctcgctggcggcggcctcaagctcct
tcattggacccatcagccgacactttggtgttccagcagattgatctggactattatctg
ggggcgacagtggctggcatgcctggacagttacaaggaaaagtcccaatcattcggatg
tttggcgtaacagacagtggtatcagcgtgtgctgtcatatccacggttttgcgccatac
ttctatattcctgcaccaagtgggttcacatctagtaacctgggtgaatttaagagggag
cttaactctgctgtcctgaaggacatgcgctccaataaggacaacatcgccatcacagtg
ctggctgtggacatcacccgcaaagagaacatgtatggttaccaagggagacagattctg
gatttcttgcggatcaccatggcgatgcctcgtctcatcgctcctgcgaagagactgctg
gaacagggcttaaagtttggcactttccccatccagagttaccaatctttcgaggccaac
attgattttgaaatcaggtttatggtggactgcgatgtggtgggatgctgctggattgaa
cttcccaaaggcaagtacagactgcgtgaagagaagagcgcggcggacgcagactctcag
tcctcaggcaaggtgtctttgtgtcagtatgaggtggacgtgggatggacggatctgata
agtcacccagctgagggagactggcagaggatcgcaccgctcagggtcctcagctttgac
atagagtgtgcaggaagaaaaggaatcttccccgaaccagacaaagatcctgtgatccag
atagcgtcgatggtgcagcggcagggcgagacggagcccttcattcgcaccgtgttcacc
ctccagtcctgcgccagcatcattggctctcaaatattgtgcttcactcaggagaaacag
ctgctgcagagctgggcggagtttttaaggacggtggaccctgacatcatcactggttac
aacatccaaaactttgacttcccctacctccttaacagggcagctactttaaaggtcaat
tactttccatacttgggccgaatgcgaggggtcaaatcagtgatgcgagaatcaaatttc
cagagcaagcagatgggccgcagagagaacaagagcatcaacatggagggccgagttcag
ttcgatctgctgcaggttctcctcagggactacaaactgcgctcgtacaccctgaacgct
gtgagtttccattttctgcaagaacagaaggaggatgtgcaacactccatcatcactgac
ctgcagaatggaaatgaacagacgcgtcgccgtttggcagtctactgcctgaaagacgcc
tacctcccactgcgcctgctgcagaagctcatgtgtgtgattaactacatggagatggcc
cgagtgaccggggtgcctctcacctacctgctctccagaggacagcagatcaaagtcgtc
tctcagctgctccgacaggccgtgaaacaggacctggtcatgcctgttgtaaagacacaa
ggaggagaagactacaccggagcgactgtcatcgagccagagaaaggatattacagcctt
cccatcaccaccctggatttctcttccttgtacccgtccatcatgatggctcacaatctg
tgctacaccaccctgctgcaaaaaggcacagcggagaaactgggcttgtcaccggatgac
ttcatcaagactcctacaggtgatcagtttgtgaagagctctgtgaggaaaggacttctt
cccgagatcctggagaacctgctgtccgctcgaaagagtgccaaaacagagctgaagaag
gagaccgaccctttcaagaagcaggtgctggacggtcgacagctggccctcaaaatcagc
gcaaactccgtctatggcttcacgggggcccaggtgggcaaactgccctgcctcgagatc
tcgcagagtgtcactgggtttggaagacagatgattgagacaaccaaacagctggtggag
tccaagtacaccatttctaatggctaccaagctgatgccaaggttatttacggtgacacc
gactccgtgatggtgaagctcggagtcgcgacagtaagagaagccatggaaatcgggaag
gaggcagctgagtcggtgtcttcacatttcacgccacccatcaagctggagtttgagaag
gtgtactacccctacctgctgatcaataagaagcgctacgcaggcctctatttctcctcc
agcgccgacacacacgagaagatggattgtaaaggcatcgagactgtccgccgagacaac
tgccccctggtggctaacctcatcaacacctgcctgcagaaaatcctcatagacagggac
cctgaaggcgccgtggctcacgccaaagaagtgatctcggacttgctgtgcaatcgtatc
gacatcagccagctggtcatcaccaaggagttaacgcgcaccgcccaggagtacgctgcc
aaacaggcccacgtggagctggcacaaaggatgcgaaaaagagatgcaggcagcgccccc
aacctgggagaccgagttccctacgtcattatcaagtctgcaaagggagcagcggcgtac
atgaagtcagaggacccgatctacgtactggagaacaacattcccatcgacacacaatac
tacctggaacagcagctgtctaaacccctgctgaggatatttgagccgatcctgggagaa
agcaaggcagagagcgtcctgctcaagggcgaccacactcgctgtaagaccgtgttgacc
tcgaagatcgggggcctcatggccttcgctcagaggagaagcacctgtatcggctgcaaa
gctgtgctcaagacggatgcggctgtttgtgatttctgtaagaaaaaggagtccgagctg
taccaaaaagagatcttccaccagaatgcactggaggagcgtttctcccgcctgtggact
cagtgccagcgctgccagggctccctccacgaggacgtgctctgtaccagccgcgactgt
cccatcttctacatgaggaagaaggtccagaaagatttggacgaccagagcaagctggtg
tctcgttttggatggtga
DBGET
integrated database retrieval system
