Brachyistius frenatus (kelp perch): 138622508
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Entry
138622508 CDS
T10614
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre00260
Glycine, serine and threonine metabolism
bfre00630
Glyoxylate and dicarboxylate metabolism
bfre00670
One carbon pool by folate
bfre01100
Metabolic pathways
bfre01200
Carbon metabolism
bfre01230
Biosynthesis of amino acids
bfre01240
Biosynthesis of cofactors
bfre04981
Folate transport and metabolism
Module
bfre_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
138622508 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
138622508 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
138622508 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
138622508 (shmt1)
Enzymes [BR:
bfre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
138622508 (shmt1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
138622508
NCBI-ProteinID:
XP_069557468
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MSSAWDSHNKMMLEPLAINDSEVFSIIKKEKHRQTYGLELIASENFTSRAVLEALGSCMN
NKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSDKWGVNVQPYSGSPANFAIYTA
VVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYIDYDRLQENA
RLFHPKLIIAGTSCYSRNLDYARFKQIANENGAYLMGDMAHISGLVAAGVVPSPFDYCDI
VSTTTHKTLRGCRAGLIFFRKGVRSVDAKGKETLYNLESLINQAVFPGLQGGPHNHAIAG
VAVALKQAVTPEFKAYQVQVLNNCKSLSSALIDHGYKIVTGGSDNHLILLDLRSKGTDGG
RAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGFLQDDFRKVAEFIHRGIEL
TLEMQRSLDPKATLKQFVQALAEGEKFQQRVAEIKAEVEAFAGQFPMPGLPEL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcctgggactcgcacaacaagatgatgctggagcctctggccatcaacgac
tcggaggtgttctccattataaaaaaagagaagcacaggcagacgtacggtctggagctg
atagcgtctgagaacttcaccagcagagccgttcttgaggctctgggttcctgtatgaac
aacaagtactctgaggggtatcctggtcagaggtactacggtggtacggagcacgttgat
gagctggagagactctgtcagaagagggcactggaggcttatggtctggactcagacaaa
tggggagtcaacgtgcagccatactcggggtcgcccgctaactttgccatctacacggct
gttgtggagcctcacggcaggatcatgggactggatcttcctgatggaggtcacctgacg
cacggctttatgactgagaagaagaaaatctcagcaacgtccatcttctttgagtccatg
ccgtataaggtgaatccagaaactggctacattgactatgacaggctacaagaaaacgct
cggctcttccaccccaaactcatcatcgcaggaacaagctgttattcccgtaaccttgac
tacgcccgctttaagcagattgctaatgagaacggtgcctatctgatgggagacatggct
cacatcagtggattagtggctgctggagtggtgccctcaccctttgattattgcgacatt
gtttctacgacaacgcacaagacgctgcgtggctgccgtgctggacttatcttcttcagg
aaaggtgtgaggagtgtggacgccaaaggaaaggagactctgtacaacttggagtctttg
atcaaccaggctgtgtttcctgggctgcagggaggcccacacaaccatgctattgcaggt
gttgctgtcgctctgaaacaggccgtgacaccagagtttaaagcctatcaggtacaggtt
cttaataactgcaaatctctgtccagcgctcttattgaccacggctacaagatcgtcacc
ggcggctctgacaaccatctgatcttgttggacctgcgcagcaaagggaccgacggaggg
cgagctgagaaagtcctggaagcctgtgccattgcctgtaataagaacacctgtccgggt
gataagagtgctttgcgccccagtggtctgaggtttggctctcctgctttgacctctaga
ggctttctgcaggatgacttcaggaaggtggctgagttcattcacagaggtattgagctg
accttggagatgcagagaagcctggatccaaaggccactctgaagcagttcgttcaggcg
ctggcggagggggagaagttccagcagcgggtagctgagatcaaggcggaggtggaggct
ttcgctggtcagttcccgatgcctggcctgcctgagctctag
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