Brachyistius frenatus (kelp perch): 138622674
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Entry
138622674 CDS
T10614
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138622674
03041 Spliceosome [BR:
bfre03041
]
138622674
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
138622674
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138622674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
138622674
NCBI-ProteinID:
XP_069557717
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MMEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHA
AASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPK
TTYENNSKHLSFDEVMNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKG
YSFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMNSMQQMSLPQTVGQQQLAF
SSQQKVKPPLQNKIGFAAAQPYGQWGQWYGNGPQINQYVPNGWQVPTYGVYGQAWNQQGF
NHLPASAGWTGMSAISNGGVMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgatcaacccagaaccttgtatgtggggaatctgtccagggatgtcacc
gagcccctcatcctgcaggtcttcacacagatcggaccctgcaagagctgtaaaatgata
gttgacacggctggaaatgatccgtactgctttgtggagttctatgaccacaggcatgct
gctgcctcactggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagtcaac
tgggccacgacgccaaccagccagaaaaaagacacaagtaatcactttcatgtcttcgtc
ggagacctcagcccagaaataaccacagaagacgtcaaagcggccttcggtccgttcggc
aggatatcagatgctcgagttgtgaaagacatggctacagggaaatctaaaggctatggc
ttcgtgtctttcttcaacaaatgggacgcggagaacgccattcagcacatggggggtcag
tggttaggaggcagacagatccggaccaactgggccacaagaaagccccccgccccgaag
accacctatgaaaataactccaagcacctatccttcgatgaagtgatgaatcagtccagc
cccagtaactgcacagtgtactgcggtggagtcagcacaggactgacagagcaactgatg
agacagaccttctcgcccttcggacaaatcatggaggtcagagttttcccagacaaaggc
tattcgtttgtgaggtttaactcccatgagtcagcagcccatgccattgtgtcggtgaac
ggctcttcaatagagggccacatagtcaaatgctactggggcaaagagaccccagacatg
atgaactcgatgcagcagatgtccttgccccagacggtcggacaacagcagttagctttt
agcagccagcagaaagtaaaaccgccactgcagaacaagatcggcttcgctgcggcccag
ccctacggccagtggggccagtggtacggcaacgggccccagatcaaccagtacgtcccg
aacgggtggcaggtccccacctacggcgtctatgggcaggcctggaaccagcagggcttc
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggtt
atggagcctacacagggattgaatggcagtatgctagccaaccagcccggtatgggagcc
gcaggataccccacacactga
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