Brachyistius frenatus (kelp perch): 138622782
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Entry
138622782 CDS
T10614
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
138622782 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138622782 (rag1)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138622782 (rag1)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138622782 (rag1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1_DNA-bd
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
TRAF3_RING
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
U-box
zf-RAG1
Motif
Other DBs
NCBI-GeneID:
138622782
NCBI-ProteinID:
XP_069557934
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MRRGPPRELTPAETEKQALSAIMAAESLETDGPRSSMPPELHHPHSKFSQWKFKLFRVKS
MEKAPLPSETQSAKGCSLGISPPAAPNIKSDHCMGPGSVMKLCLGGKGKENVEGPGKRVD
IKLQEMEIHMNHLRCLCRICGMVLRKVKGPVHDVHGDLDEASKCALRKMGCKFTTWTEVI
LKVFKVDVKEDTESVHPLSFCHRCWMAAIRGGGVCSFTRTRVPEWKPHSSSCHLCSPRKP
SFHRRGRKRRKVIPKAQSLAKRTRWDHGDSIAIGEKRALRPFGDRHGPVLTARRKPSIPR
EQWVRNITHCQKEHLSTKLISEKLPVDFIISFTCMVCDHLLSDPAQSPCGHLFCRSCIIK
FIHVLGPHCPACNMPCAPDDLTPPAKTFLSALYFLPLHCPNDGCGVQVRLDSFKAHCLSH
ELEEDASQHLSQLDNYLLTNKGGRPRQHLLSLTRRAQKHRLKDLKNQVKVFSDKEEGGDL
KSVCLTLFLLALRSGNEHRQADELEAMMQGRGFGLNPAVCLAIRVNTFLSCSQYHKMYRT
VKATSGRQIFQPLHTLRAAEKELLPGFHQFEWQPALKNVSASCSVGIINGVSGWVPSVDD
APADTMTRRFRYDVALVSALKDLEEDIMEGLRESGMEDSVCTSGFSVMIKECCDGMGDVS
EKHGGGPVVPEKAVRFSFTVMSVSVLAEDCEEEVTIFTEPKPNSEMSCKPLCLMLVDESD
HETLTAVLGPVVAERNAMKESRLILSIGGLPRSFRFHFRGTGYDEKMVRDLEGLEASGSS
YVCTLCDSSRADASQNMVLHSITRSHEENLERYEIWRTNPFSESVDELRDRVKGVSTKPF
MDTHPTMDALHCDIGNATEFYKIFQDEIGEVYKKVNPSREERRSWRAALDKQLRKKMKLK
PVMRMNGNYARRLMTLETMEVVCELVPSEERREALRELMRLYIQMKPVWRATCPAKECPD
QLCRYSFNSQRFADLLSSTFKYRYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESA
NKLFRRFRKMNARQSKAFELEDVLKHHWLYTSKHLQKFMEAHKDSAKAFQATIDPVEIQD
DEDMSLEVTDF
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcggagagggcccccgagggagctaacgccagctgagactgaaaaacaagctctaagt
gccatcatggcagcagaaagcctggagacagatggtcccagatcctccatgccacctgag
ctccaccatccccactccaagttctctcagtggaagtttaaactgtttagggtgaaatcc
atggagaaggcccctcttcccagtgagacgcagtctgcgaaaggatgctcgttagggatc
tcacctcctgcagctccaaatataaagtcagatcattgtatgggtcctgggagtgttatg
aaattatgccttgggggaaaaggaaaggaaaatgtggagggccctggcaagagagtagat
ataaagctgcaggaaatggaaatccacatgaaccacctcaggtgcttgtgtcgcatctgt
ggaatggtcctgaggaaagtcaaaggaccagtgcacgatgttcatggagatctggatgag
gccagcaaatgtgccctccgtaaaatgggctgcaagtttacaacctggacagaggtcatc
cttaaagtcttcaaagtggacgtgaaagaggacacagaatctgtccaccctctttctttc
tgccatcgctgctggatggctgccatacgaggagggggggtctgcagcttcaccagaaca
agagtccctgagtggaaacctcactcttcctcctgccacctttgctccccaaggaaacca
tcattccacaggagagggaggaagaggaggaaagtaattcccaaagctcagagcttggca
aagaggaccaggtgggaccacggagacagcattgctattggtgagaagagggctctgagg
ccgttcggagaccgtcatggtcctgtgctcacggccaggaggaaacccagcatcccgaga
gagcagtgggtgaggaacatcacacactgccagaaagagcacctaagtaccaagcttatc
tctgagaagctcccagtggacttcatcatttctttcacctgcatggtgtgtgaccacctg
ctctctgatccagctcagtccccctgtgggcacctcttctgccgcagctgtattataaaa
ttcatccacgttctgggacctcactgccctgcctgcaacatgccctgtgcccctgatgac
ctcaccccacctgccaaaaccttcttatcagccctgtatttcctgcccttgcactgcccc
aatgacggctgtggagtacaagtaaggctagactcatttaaggctcactgtctgagccac
gagttggaggaagacgccagccaacatttatcacaactcgacaactacctgctaaccaac
aaagggggaagaccccgccagcacttgctctcgctaacccgtcgtgcacagaagcatcgg
ctgaaggatctgaagaaccaggtgaaggtgttctcggacaaagaggaaggtggtgacctg
aagtctgtgtgtttgactttgttcctgctcgcactgagatctgggaatgaacatcgtcag
gcagatgaactagaggccatgatgcagggcagaggctttgggttgaatcccgctgtgtgc
ctcgccattcgggtcaacactttcctgagctgcagccagtatcacaagatgtaccggact
gtcaaagccacaagtggccgccagatctttcagccactgcacaccctccgagctgcagag
aaggagcttcttcccggctttcaccagtttgaatggcagccagctctcaagaatgtgtct
gcatcttgcagtgttggcattattaatggggtctctggatgggttccctcggtggatgac
gccccggctgacaccatgactcgacgctttcgctatgatgtggcactggtgtcagcatta
aaggatctggaggaggacatcatggaggggctgagagagagcgggatggaagacagtgtt
tgcacttcaggcttcagtgtcatgatcaaggagtgttgtgatggcatgggtgatgtcagc
gaaaagcacggtggaggaccagttgttcctgagaaggctgtacgtttctctttcactgtt
atgtctgtgtctgtcctggcggaggattgtgaggaggaggttaccattttcaccgagccg
aagccaaactcagaaatgtcctgcaagcccctttgcctcatgttagtggatgagtcagac
catgagacactcacagctgtcctggggcctgtagttgcagagcgcaatgcaatgaaagag
agcaggctcattctatccattggtggcctgcctcgctcttttcgctttcacttcaggggc
acggggtacgatgagaagatggtgcgagatttggagggtttggaggcatcagggtcgtca
tacgtctgcactctgtgtgactccagtcgagcagacgcctctcaaaacatggtgctacac
tccatcacacgcagtcatgaggagaacctagaacgttatgaaatatggagaaccaatccc
ttctctgagtctgttgatgagctgcgagaccgggtcaaaggggtctctaccaagccattc
atggacacccaccccacaatggatgcattgcactgcgatattggcaatgccactgaattc
tacaaaatcttccaggacgagattggagaagtgtacaaaaaggtgaaccccagccgggag
gaacgccgcagctggagggcagccctggataaacagctgaggaagaagatgaagcttaaa
ccggtaatgaggatgaatgggaactatgcccgcaggctaatgaccctggagactatggag
gtggtgtgtgagctggtgccctcagaggagagaagagaggccctgagggagctcatgagg
ctctacatccagatgaagcctgtgtggcgtgccacctgcccagccaaggagtgccctgac
cagctgtgccgctacagttttaactcccagcgctttgccgacctcctctcctctaccttc
aaatataggtacaatggaaagataaccaattacctgcacaagaccctggcccatgtgcct
gaaatcatagagagagatggatccattggagcctgggccagcgaggggaacgagtcggca
aacaaactgttcaggcgtttccggaagatgaatgcacgtcagtcaaaggccttcgagctg
gaggacgtgctgaaacatcactggctctacacgtccaagcacctgcaaaagtttatggag
gcccacaaggactctgccaaagctttccaagctaccattgacccggtagagatacaggat
gacgaggatatgtctctggaagtgaccgatttttga
DBGET
integrated database retrieval system
